Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12p14
         (403 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine...    25   1.4  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   3.2  
AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    22   9.6  

>AJ459779-1|CAD30839.1|  405|Anopheles gambiae clip-domain serine
           protease protein.
          Length = 405

 Score = 24.6 bits (51), Expect = 1.4
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +3

Query: 54  EYNFXIHLNXVCVYKND 104
           EYN  IH N  CVY+ND
Sbjct: 203 EYN--IHTNPDCVYEND 217


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 3.2
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -2

Query: 357  WFKCVIAEVKEDGLVYVK 304
            WF C++ +++ED   Y+K
Sbjct: 3268 WFGCMLEDLREDVQEYLK 3285


>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 9.6
 Identities = 11/32 (34%), Positives = 15/32 (46%)
 Frame = -1

Query: 163 TFTFPVGKMKPTTRQFVDCESFLYTHTWFKCI 68
           T TF  GK+K      VD  + L  H   +C+
Sbjct: 135 TPTFTSGKLKAMFHTIVDVANRLDQHLGERCV 166


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,208
Number of Sequences: 2352
Number of extensions: 7225
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 32067225
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)