Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12p12
(670 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 76 3e-16
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 56 3e-10
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 42 4e-06
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 32 0.004
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 22 4.6
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 6.1
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 6.1
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 6.1
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 6.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 6.1
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 6.1
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 6.1
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 6.1
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 6.1
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 21 8.0
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 21 8.0
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 21 8.0
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 21 8.0
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 21 8.0
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 21 8.0
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 21 8.0
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 21 8.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 21 8.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 21 8.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 21 8.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 21 8.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 21 8.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 21 8.0
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 76.2 bits (179), Expect = 3e-16
Identities = 46/137 (33%), Positives = 75/137 (54%)
Frame = -2
Query: 651 VKLADFGFARFCTDGENRRVLSQTYCGSAAYAAPEVVSGTPYNPKLADVWSLGIILFIML 472
VKLADFG A GE + + G+ Y +PEV+ PY K D+W+ G+IL+I+L
Sbjct: 51 VKLADFGLA-IEVQGEAQAWFG--FAGTPGYLSPEVLKKEPYG-KPVDIWACGVILYILL 106
Query: 471 NGSMPFDDTNLRKLLKDQMSRNWVFRSRIRDSVSPAAKSIVRHILEPDITLRLTLDRVLS 292
G PF D + +L + ++ + S D+V+P AK+++ +L + + R+T L
Sbjct: 107 VGYPPFWDEDQHRLYAQIKTGSYDYPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALK 166
Query: 291 HEWTRPRKDKSASLMGR 241
H W R ++ AS++ R
Sbjct: 167 HPWICQR-ERVASVVHR 182
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 56.0 bits (129), Expect = 3e-10
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = -2
Query: 651 VKLADFGFARFCTDGENRRVLSQTYCGSAAYAAPEVVSGTPYNPKLADVWSLGIILFIML 472
VKL DFGFA+ G + T+CG+ Y APEV+ ++ AD WSLG+++F +L
Sbjct: 505 VKLVDFGFAKRLDHGRK----TWTFCGTPEYVAPEVILNKGHDIS-ADYWSLGVLMFELL 559
Query: 471 NGSMPF 454
G+ PF
Sbjct: 560 TGTPPF 565
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 42.3 bits (95), Expect = 4e-06
Identities = 32/126 (25%), Positives = 56/126 (44%)
Frame = -2
Query: 669 LSRRFNVKLADFGFARFCTDGENRRVLSQTYCGSAAYAAPEVVSGTPYNPKLADVWSLGI 490
+S+ KL DFG + G + + G+ Y APEV+ P AD++SLGI
Sbjct: 188 MSKNGQPKLTDFGSSVLI--GAPNEI--DKFYGTPGYTAPEVIKQNRPTPA-ADIYSLGI 242
Query: 489 ILFIMLNGSMPFDDTNLRKLLKDQMSRNWVFRSRIRDSVSPAAKSIVRHILEPDITLRLT 310
+ + ML +PF + ++ + I D K++ + + +IT R T
Sbjct: 243 VAWQMLFRKLPFAGLHSHTIIYLSAKGHRPIDDNIDDEFKGTYKTLYKQMWSQNITERPT 302
Query: 309 LDRVLS 292
+ V++
Sbjct: 303 TNEVIT 308
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 32.3 bits (70), Expect = 0.004
Identities = 19/76 (25%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = -2
Query: 648 KLADFGFARFCTDGENRRVLSQTYCGSAAYAAPEVVSGTPYNPKLADVWSLGIILF-IML 472
K+ADFG +R ++ + APE ++ + +DVWS+GI+ + +M
Sbjct: 775 KIADFGLSREIESATEGAYTTRGGKIPVRWTAPEAIAFRKFT-SASDVWSMGIVCWEVMS 833
Query: 471 NGSMPFDDTNLRKLLK 424
G P+ + + + ++K
Sbjct: 834 YGERPYWNWSNQDVIK 849
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 22.2 bits (45), Expect = 4.6
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = +1
Query: 286 FMGEYTVKCQSQCNIGFEDMTNDRLGCW 369
F + TVK S+ + + N+ L CW
Sbjct: 301 FDSQLTVKAVSKNGVLLFGLANNTLSCW 328
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.1
Identities = 6/15 (40%), Positives = 13/15 (86%)
Frame = -3
Query: 101 LAIKSGQVYNHFFIW 57
L++K+ + YN+++IW
Sbjct: 134 LSLKNIEPYNNYYIW 148
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 435 KLLKDQMSRNWVFRSRIRDSVS 370
KLL+++ SRN RSR R+ S
Sbjct: 28 KLLEERTSRNRYSRSREREQNS 49
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 435 KLLKDQMSRNWVFRSRIRDSVS 370
KLL+++ SRN RSR R+ S
Sbjct: 28 KLLEERTSRNRYSRSREREQNS 49
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 435 KLLKDQMSRNWVFRSRIRDSVS 370
KLL+++ SRN RSR R+ S
Sbjct: 28 KLLEERTSRNRYSRSREREQNS 49
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 435 KLLKDQMSRNWVFRSRIRDSVS 370
KLL+++ SRN RSR R+ S
Sbjct: 28 KLLEERTSRNRYSRSREREQNS 49
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 435 KLLKDQMSRNWVFRSRIRDSVS 370
KLL+++ SRN RSR R+ S
Sbjct: 28 KLLEERTSRNRYSRSREREQNS 49
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 435 KLLKDQMSRNWVFRSRIRDSVS 370
KLL+++ SRN RSR R+ S
Sbjct: 28 KLLEERTSRNRYSRSREREQNS 49
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 435 KLLKDQMSRNWVFRSRIRDSVS 370
KLL+++ SRN RSR R+ S
Sbjct: 28 KLLEERTSRNRYSRSREREQNS 49
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 6.1
Identities = 6/15 (40%), Positives = 13/15 (86%)
Frame = -3
Query: 101 LAIKSGQVYNHFFIW 57
L++K+ + YN+++IW
Sbjct: 134 LSLKNIEPYNNYYIW 148
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 150 DHRETERERHDDINMRSRD*KWTSIQSFF 64
++RET RER D R R + I S +
Sbjct: 58 EYRETSRERSRDRRERGRSREHRIIPSHY 86
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 150 DHRETERERHDDINMRSRD*KWTSIQSFF 64
++RET RER D R R + I S +
Sbjct: 58 EYRETSRERSRDRRERGRSREHRIIPSHY 86
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 150 DHRETERERHDDINMRSRD*KWTSIQSFF 64
++RET RER D R R + I S +
Sbjct: 58 EYRETSRERSRDRRERGRSREHRIIPSHY 86
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 150 DHRETERERHDDINMRSRD*KWTSIQSFF 64
++RET RER D R R + I S +
Sbjct: 58 EYRETSRERSRDRRERGRSREHRIIPSHY 86
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 150 DHRETERERHDDINMRSRD*KWTSIQSFF 64
++RET RER D R R + I S +
Sbjct: 58 EYRETSRERSRDRRERGRSREHRIIPSHY 86
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 150 DHRETERERHDDINMRSRD*KWTSIQSFF 64
++RET RER D R R + I S +
Sbjct: 58 EYRETSRERSRDRRERGRSREHRIIPSHY 86
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 150 DHRETERERHDDINMRSRD*KWTSIQSFF 64
++RET RER D R R + I S +
Sbjct: 58 EYRETSRERSRDRRERGRSREHRIIPSHY 86
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 150 DHRETERERHDDINMRSRD*KWTSIQSFF 64
++RET RER D R R + I S +
Sbjct: 307 EYRETSRERSRDRRERGRSREHRIIPSHY 335
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 150 DHRETERERHDDINMRSRD*KWTSIQSFF 64
++RET RER D R R + I S +
Sbjct: 307 EYRETSRERSRDRRERGRSREHRIIPSHY 335
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 150 DHRETERERHDDINMRSRD*KWTSIQSFF 64
++RET RER D R R + I S +
Sbjct: 307 EYRETSRERSRDRRERGRSREHRIIPSHY 335
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 150 DHRETERERHDDINMRSRD*KWTSIQSFF 64
++RET RER D R R + I S +
Sbjct: 307 EYRETSRERSRDRRERGRSREHRIIPSHY 335
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 150 DHRETERERHDDINMRSRD*KWTSIQSFF 64
++RET RER D R R + I S +
Sbjct: 307 EYRETSRERSRDRRERGRSREHRIIPSHY 335
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 150 DHRETERERHDDINMRSRD*KWTSIQSFF 64
++RET RER D R R + I S +
Sbjct: 307 EYRETSRERSRDRRERGRSREHRIIPSHY 335
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 21.4 bits (43), Expect = 8.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = -2
Query: 150 DHRETERERHDDINMRSRD*KWTSIQSFF 64
++RET RER D R R + I S +
Sbjct: 307 EYRETSRERSRDRRERGRSREHRIIPSHY 335
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,243
Number of Sequences: 438
Number of extensions: 4189
Number of successful extensions: 38
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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