Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12p08
(839 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14645-1|AAA28987.1| 450|Drosophila melanogaster protein ( D.me... 75 1e-13
M14644-1|AAA28986.1| 449|Drosophila melanogaster protein ( D.me... 75 1e-13
M14643-1|AAA28985.1| 450|Drosophila melanogaster protein ( D.me... 75 1e-13
BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p pro... 75 1e-13
BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p pro... 75 1e-13
BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p pro... 75 1e-13
AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p pro... 75 1e-13
AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p pro... 75 1e-13
AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA... 75 1e-13
AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,... 75 1e-13
AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,... 75 1e-13
AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA ... 75 1e-13
M14646-1|AAA28988.1| 462|Drosophila melanogaster protein ( D.me... 68 1e-11
AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA... 68 1e-11
AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p pro... 48 2e-05
AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA... 48 2e-05
M20420-1|AAA28991.1| 446|Drosophila melanogaster protein ( D.me... 46 9e-05
AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p pro... 46 9e-05
AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p pro... 46 9e-05
AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA ... 46 9e-05
AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-P... 46 9e-05
M20419-1|AAA28989.1| 447|Drosophila melanogaster protein ( D.me... 45 1e-04
BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p pro... 45 1e-04
AY089253-1|AAL89991.1| 455|Drosophila melanogaster AT04270p pro... 45 1e-04
AE014297-2432|AAF55488.1| 455|Drosophila melanogaster CG7794-PA... 45 1e-04
AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD... 45 1e-04
AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC... 45 1e-04
AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA... 45 1e-04
AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB... 45 1e-04
X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubul... 43 5e-04
M22335-1|AAA28993.1| 454|Drosophila melanogaster protein ( D.me... 43 5e-04
BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p pro... 43 5e-04
AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA... 43 5e-04
AY060858-1|AAL28406.1| 607|Drosophila melanogaster GM03282p pro... 29 6.0
AE014134-533|AAF51166.1| 607|Drosophila melanogaster CG17265-PA... 29 6.0
>M14645-1|AAA28987.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-3), complete
cds. ).
Length = 450
Score = 74.9 bits (176), Expect = 1e-13
Identities = 33/46 (71%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQ-PGADD 654
FVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +++ D + GA++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEE 449
Score = 38.3 bits (85), Expect = 0.013
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 837 WGKLDHKFDLMYSKRAF 787
W +LDHKFDLMY+KRAF
Sbjct: 388 WARLDHKFDLMYAKRAF 404
>M14644-1|AAA28986.1| 449|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-2), complete
cds. ).
Length = 449
Score = 74.9 bits (176), Expect = 1e-13
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
FVHWYVGEGMEEGEF+EAREDLAALE+DY+EV I+ S + G D+E
Sbjct: 404 FVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGID-STTELGEDEE 448
Score = 38.3 bits (85), Expect = 0.013
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 837 WGKLDHKFDLMYSKRAF 787
W +LDHKFDLMY+KRAF
Sbjct: 388 WARLDHKFDLMYAKRAF 404
>M14643-1|AAA28985.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-1), complete
cds. ).
Length = 450
Score = 74.9 bits (176), Expect = 1e-13
Identities = 33/46 (71%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQ-PGADD 654
FVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +++ D + GA++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEE 449
Score = 38.3 bits (85), Expect = 0.013
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 837 WGKLDHKFDLMYSKRAF 787
W +LDHKFDLMY+KRAF
Sbjct: 388 WARLDHKFDLMYAKRAF 404
>BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p
protein.
Length = 450
Score = 74.9 bits (176), Expect = 1e-13
Identities = 33/46 (71%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQ-PGADD 654
FVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +++ D + GA++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEE 449
Score = 38.3 bits (85), Expect = 0.013
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 837 WGKLDHKFDLMYSKRAF 787
W +LDHKFDLMY+KRAF
Sbjct: 388 WARLDHKFDLMYAKRAF 404
>BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p
protein.
Length = 450
Score = 74.9 bits (176), Expect = 1e-13
Identities = 33/46 (71%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQ-PGADD 654
FVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +++ D + GA++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEE 449
Score = 38.3 bits (85), Expect = 0.013
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 837 WGKLDHKFDLMYSKRAF 787
W +LDHKFDLMY+KRAF
Sbjct: 388 WARLDHKFDLMYAKRAF 404
>BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p
protein.
Length = 450
Score = 74.9 bits (176), Expect = 1e-13
Identities = 33/46 (71%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQ-PGADD 654
FVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +++ D + GA++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEE 449
Score = 38.3 bits (85), Expect = 0.013
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 837 WGKLDHKFDLMYSKRAF 787
W +LDHKFDLMY+KRAF
Sbjct: 388 WARLDHKFDLMYAKRAF 404
>AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p
protein.
Length = 449
Score = 74.9 bits (176), Expect = 1e-13
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
FVHWYVGEGMEEGEF+EAREDLAALE+DY+EV I+ S + G D+E
Sbjct: 404 FVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGID-STTELGEDEE 448
Score = 38.3 bits (85), Expect = 0.013
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 837 WGKLDHKFDLMYSKRAF 787
W +LDHKFDLMY+KRAF
Sbjct: 388 WARLDHKFDLMYAKRAF 404
>AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p
protein.
Length = 450
Score = 74.9 bits (176), Expect = 1e-13
Identities = 33/46 (71%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQ-PGADD 654
FVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +++ D + GA++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEE 449
Score = 38.3 bits (85), Expect = 0.013
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 837 WGKLDHKFDLMYSKRAF 787
W +LDHKFDLMY+KRAF
Sbjct: 388 WARLDHKFDLMYAKRAF 404
>AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA
protein.
Length = 449
Score = 74.9 bits (176), Expect = 1e-13
Identities = 34/46 (73%), Positives = 40/46 (86%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
FVHWYVGEGMEEGEF+EAREDLAALE+DY+EV I+ S + G D+E
Sbjct: 404 FVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGID-STTELGEDEE 448
Score = 38.3 bits (85), Expect = 0.013
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 837 WGKLDHKFDLMYSKRAF 787
W +LDHKFDLMY+KRAF
Sbjct: 388 WARLDHKFDLMYAKRAF 404
>AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,
isoform B protein.
Length = 450
Score = 74.9 bits (176), Expect = 1e-13
Identities = 33/46 (71%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQ-PGADD 654
FVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +++ D + GA++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEE 449
Score = 38.3 bits (85), Expect = 0.013
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 837 WGKLDHKFDLMYSKRAF 787
W +LDHKFDLMY+KRAF
Sbjct: 388 WARLDHKFDLMYAKRAF 404
>AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,
isoform A protein.
Length = 450
Score = 74.9 bits (176), Expect = 1e-13
Identities = 33/46 (71%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQ-PGADD 654
FVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +++ D + GA++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEE 449
Score = 38.3 bits (85), Expect = 0.013
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 837 WGKLDHKFDLMYSKRAF 787
W +LDHKFDLMY+KRAF
Sbjct: 388 WARLDHKFDLMYAKRAF 404
>AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA
protein.
Length = 450
Score = 74.9 bits (176), Expect = 1e-13
Identities = 33/46 (71%), Positives = 41/46 (89%), Gaps = 1/46 (2%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQ-PGADD 654
FVHWYVGEGMEEGEFSEAREDLAALE+DY+EV +++ D + GA++
Sbjct: 404 FVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDSGDGEGEGAEE 449
Score = 38.3 bits (85), Expect = 0.013
Identities = 14/17 (82%), Positives = 16/17 (94%)
Frame = -3
Query: 837 WGKLDHKFDLMYSKRAF 787
W +LDHKFDLMY+KRAF
Sbjct: 388 WARLDHKFDLMYAKRAF 404
>M14646-1|AAA28988.1| 462|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-4), complete
cds. ).
Length = 462
Score = 68.1 bits (159), Expect = 1e-11
Identities = 28/46 (60%), Positives = 39/46 (84%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
FVHWYVGEGMEEGEF+EARE++A LERD++EV ++ + + G D++
Sbjct: 415 FVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNA--EEGGDED 458
>AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA
protein.
Length = 462
Score = 68.1 bits (159), Expect = 1e-11
Identities = 28/46 (60%), Positives = 39/46 (84%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
FVHWYVGEGMEEGEF+EARE++A LERD++EV ++ + + G D++
Sbjct: 415 FVHWYVGEGMEEGEFTEARENIAVLERDFEEVGLDNA--EEGGDED 458
>AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p
protein.
Length = 457
Score = 47.6 bits (108), Expect = 2e-05
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = -1
Query: 812 TSCIPSELFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
T+ + F+HWY GEGM+E EF+EA ++ L +Y + T+D + DDE
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADDEVEFDDE 439
>AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA
protein.
Length = 522
Score = 47.6 bits (108), Expect = 2e-05
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = -1
Query: 812 TSCIPSELFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
T+ + F+HWY GEGM+E EF+EA ++ L +Y + T+D + DDE
Sbjct: 451 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLISEYQQYQEATADDEVEFDDE 504
>M20420-1|AAA28991.1| 446|Drosophila melanogaster protein (
D.melanogaster beta-2 tubulin mRNA, complete cds. ).
Length = 446
Score = 45.6 bits (103), Expect = 9e-05
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = -1
Query: 812 TSCIPSELFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
T+ + F+HWY GEGM+E EF+EA ++ L +Y + T+D + D++
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEGEFDED 439
>AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p
protein.
Length = 446
Score = 45.6 bits (103), Expect = 9e-05
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = -1
Query: 812 TSCIPSELFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
T+ + F+HWY GEGM+E EF+EA ++ L +Y + T+D + D++
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEGEFDED 439
>AY089468-1|AAL90206.1| 462|Drosophila melanogaster AT27896p
protein.
Length = 462
Score = 45.6 bits (103), Expect = 9e-05
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = -1
Query: 827 LTTSSTSCIPSELFVHWYVGEGMEEGEFSEAREDLAALERDY 702
L +S S + + +HWY GEGMEE EF +A+++L A+ DY
Sbjct: 380 LLDASMSMLRRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDY 421
>AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA
protein.
Length = 446
Score = 45.6 bits (103), Expect = 9e-05
Identities = 19/54 (35%), Positives = 32/54 (59%)
Frame = -1
Query: 812 TSCIPSELFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
T+ + F+HWY GEGM+E EF+EA ++ L +Y + T+D + D++
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEEGEFDED 439
>AE014296-1121|AAF50659.1| 462|Drosophila melanogaster CG32396-PA
protein.
Length = 462
Score = 45.6 bits (103), Expect = 9e-05
Identities = 19/42 (45%), Positives = 28/42 (66%)
Frame = -1
Query: 827 LTTSSTSCIPSELFVHWYVGEGMEEGEFSEAREDLAALERDY 702
L +S S + + +HWY GEGMEE EF +A+++L A+ DY
Sbjct: 380 LLDASMSMLRRKAHLHWYTGEGMEEQEFQDAQQELQAIIDDY 421
>M20419-1|AAA28989.1| 447|Drosophila melanogaster protein (
D.melanogaster beta-1 tubulin mRNA, complete cds. ).
Length = 447
Score = 44.8 bits (101), Expect = 1e-04
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = -1
Query: 812 TSCIPSELFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
T+ + F+HWY GEGM+E EF+EA ++ L +Y + T+D ++E
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEE 439
>BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p
protein.
Length = 447
Score = 44.8 bits (101), Expect = 1e-04
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = -1
Query: 812 TSCIPSELFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
T+ + F+HWY GEGM+E EF+EA ++ L +Y + T+D ++E
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEE 439
>AY089253-1|AAL89991.1| 455|Drosophila melanogaster AT04270p
protein.
Length = 455
Score = 44.8 bits (101), Expect = 1e-04
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
FV+ YVGEG+EEG F+EA E++ L DY EV + +D E
Sbjct: 405 FVYHYVGEGLEEGNFNEASENICQLVHDYLEVDASAPTSRRDSDPE 450
>AE014297-2432|AAF55488.1| 455|Drosophila melanogaster CG7794-PA
protein.
Length = 455
Score = 44.8 bits (101), Expect = 1e-04
Identities = 21/46 (45%), Positives = 28/46 (60%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
FV+ YVGEG+EEG F+EA E++ L DY EV + +D E
Sbjct: 405 FVYHYVGEGLEEGNFNEASENICQLVHDYLEVDASAPTSRRDSDPE 450
>AE013599-2894|AAN16132.2| 375|Drosophila melanogaster CG9277-PD,
isoform D protein.
Length = 375
Score = 44.8 bits (101), Expect = 1e-04
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = -1
Query: 812 TSCIPSELFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
T+ + F+HWY GEGM+E EF+EA ++ L +Y + T+D ++E
Sbjct: 314 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEE 367
>AE013599-2893|AAN16133.1| 375|Drosophila melanogaster CG9277-PC,
isoform C protein.
Length = 375
Score = 44.8 bits (101), Expect = 1e-04
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = -1
Query: 812 TSCIPSELFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
T+ + F+HWY GEGM+E EF+EA ++ L +Y + T+D ++E
Sbjct: 314 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEE 367
>AE013599-2892|AAF57556.1| 456|Drosophila melanogaster CG9277-PA,
isoform A protein.
Length = 456
Score = 44.8 bits (101), Expect = 1e-04
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = -1
Query: 812 TSCIPSELFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
T+ + F+HWY GEGM+E EF+EA ++ L +Y + T+D ++E
Sbjct: 395 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEE 448
>AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB,
isoform B protein.
Length = 447
Score = 44.8 bits (101), Expect = 1e-04
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = -1
Query: 812 TSCIPSELFVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSDMQPGADDE 651
T+ + F+HWY GEGM+E EF+EA ++ L +Y + T+D ++E
Sbjct: 386 TAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATADEDAEFEEE 439
>X16826-1|CAA34726.1| 435|Drosophila melanogaster 60C beta tubulin
protein.
Length = 435
Score = 43.2 bits (97), Expect = 5e-04
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSD 675
F+HWY GEGM+E EF+EA ++ L +Y + T+D
Sbjct: 381 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAD 418
>M22335-1|AAA28993.1| 454|Drosophila melanogaster protein (
D.melanogaster beta-3 tubulin gene, exons 2, 3 and 4. ).
Length = 454
Score = 43.2 bits (97), Expect = 5e-04
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSD 675
F+HWY GEGM+E EF+EA ++ L +Y + T+D
Sbjct: 400 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAD 437
>BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p
protein.
Length = 454
Score = 43.2 bits (97), Expect = 5e-04
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSD 675
F+HWY GEGM+E EF+EA ++ L +Y + T+D
Sbjct: 400 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAD 437
>AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA
protein.
Length = 454
Score = 43.2 bits (97), Expect = 5e-04
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = -1
Query: 788 FVHWYVGEGMEEGEFSEAREDLAALERDYDEVAIETSD 675
F+HWY GEGM+E EF+EA ++ L +Y + T+D
Sbjct: 400 FLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQEATAD 437
>AY060858-1|AAL28406.1| 607|Drosophila melanogaster GM03282p
protein.
Length = 607
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +2
Query: 578 QTL*QETNIQ*QKCKSSSATKTIITHHRRRAACLTSQ*PLHRNLVPELPNLLSLQR 745
Q+ Q+ Q Q+ TI H + LTS+ P+ + ELPNL QR
Sbjct: 102 QSAAQKQQQQQQQSHQLQTVATIHQPHSTQQQALTSRLPIQQQSAKELPNLAGQQR 157
>AE014134-533|AAF51166.1| 607|Drosophila melanogaster CG17265-PA
protein.
Length = 607
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +2
Query: 578 QTL*QETNIQ*QKCKSSSATKTIITHHRRRAACLTSQ*PLHRNLVPELPNLLSLQR 745
Q+ Q+ Q Q+ TI H + LTS+ P+ + ELPNL QR
Sbjct: 104 QSAAQKQQQQQQQSHQLQTVATIHQPHSTQQQALTSRLPIQQQSTKELPNLAGQQR 159
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,840,631
Number of Sequences: 53049
Number of extensions: 729142
Number of successful extensions: 1982
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1982
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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