Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12o19
(713 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 27 0.13
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 27 0.13
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 27 0.13
DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein ... 26 0.41
AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein ... 26 0.41
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 25 0.94
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 23 2.2
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 23 2.2
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 23 2.2
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 23 2.9
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 23 2.9
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 23 2.9
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 22 5.0
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 22 6.6
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 21 8.8
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 8.8
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 27.5 bits (58), Expect = 0.13
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -3
Query: 624 YFNVYKTFVNYYHENYPDN 568
+F++YKT ++YYH+ Y +N
Sbjct: 417 FFSIYKTILDYYHK-YKEN 434
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 27.5 bits (58), Expect = 0.13
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -3
Query: 624 YFNVYKTFVNYYHENYPDN 568
+F++YKT ++YYH+ Y +N
Sbjct: 417 FFSIYKTILDYYHK-YKEN 434
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 27.5 bits (58), Expect = 0.13
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -3
Query: 624 YFNVYKTFVNYYHENYPDN 568
+F++YKT ++YYH+ Y +N
Sbjct: 43 FFSIYKTILDYYHK-YKEN 60
>DQ855482-1|ABH88169.1| 116|Apis mellifera chemosensory protein 1
protein.
Length = 116
Score = 25.8 bits (54), Expect = 0.41
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -3
Query: 315 LSQERLANQYPSAEAA*QPKGSCFATDSTIA*RPRPNKFQIRCKRLT 175
L+ +RL NQY GSC DS FQ +CK+ T
Sbjct: 36 LANDRLRNQYYDCFI---DAGSCLTPDSVFFKSHITEAFQTQCKKCT 79
>AJ973399-1|CAJ01446.1| 116|Apis mellifera hypothetical protein
protein.
Length = 116
Score = 25.8 bits (54), Expect = 0.41
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -3
Query: 315 LSQERLANQYPSAEAA*QPKGSCFATDSTIA*RPRPNKFQIRCKRLT 175
L+ +RL NQY GSC DS FQ +CK+ T
Sbjct: 36 LANDRLRNQYYDCFI---DAGSCLTPDSVFFKSHITEAFQTQCKKCT 79
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 24.6 bits (51), Expect = 0.94
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = +2
Query: 281 LGYWLASLSWLSSRVQLPVLVKPQDLCCPISKKKTRFCY 397
L Y L S L V ++++P D+ C I + FC+
Sbjct: 694 LSYVLLSGILLCYLVTFALVLRPTDIVCGIQRFAAGFCF 732
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 621 FNVYKTFVNYYHENYPDNFNLTSNY 547
++ Y + N Y+ NY +N+N +NY
Sbjct: 91 YSNYNNYNNNYNNNYNNNYN--NNY 113
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 23.4 bits (48), Expect = 2.2
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -3
Query: 621 FNVYKTFVNYYHENYPDNFNLTSNY 547
++ Y + N Y+ NY +N+N +NY
Sbjct: 91 YSNYNNYNNNYNNNYNNNYN--NNY 113
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 23.4 bits (48), Expect = 2.2
Identities = 8/21 (38%), Positives = 17/21 (80%)
Frame = -2
Query: 559 NIQLLSKGRRRQQFFYILQQL 497
+I++++K RR + F+Y+ QQ+
Sbjct: 221 DIRIVNKDRRGELFYYMHQQI 241
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 23.0 bits (47), Expect = 2.9
Identities = 5/14 (35%), Positives = 11/14 (78%)
Frame = -3
Query: 627 SYFNVYKTFVNYYH 586
+++ +YK ++YYH
Sbjct: 417 AFYRIYKRIIDYYH 430
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 23.0 bits (47), Expect = 2.9
Identities = 5/14 (35%), Positives = 11/14 (78%)
Frame = -3
Query: 627 SYFNVYKTFVNYYH 586
+++ +YK ++YYH
Sbjct: 417 AFYRIYKRIIDYYH 430
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 23.0 bits (47), Expect = 2.9
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +2
Query: 212 LGRYAIVESVAKQLPLGC*AASALGYWLASLSWLS 316
LGRY ++ LPLGC + +G ++ WL+
Sbjct: 206 LGRY---DNGIDPLPLGCPVNAIMGLFVLWWGWLA 237
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 22.2 bits (45), Expect = 5.0
Identities = 7/14 (50%), Positives = 13/14 (92%)
Frame = -3
Query: 438 FLSSYNIICISIER 397
+LSS+ ++CIS++R
Sbjct: 123 YLSSFVLVCISMDR 136
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 21.8 bits (44), Expect = 6.6
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +2
Query: 311 LSSRVQLPVLVKPQDLCCPISKKKTRFCY 397
LS+ + P ++ PQD+C K F Y
Sbjct: 66 LSNPCKHPTIIMPQDVCFNDLKFIIEFVY 94
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/24 (33%), Positives = 15/24 (62%)
Frame = +3
Query: 546 NSWMLN*NCPGNSHDNNSQTFYKH 617
N+ + N C +++ NN+Q YK+
Sbjct: 409 NNLIKNTRCAKSNNQNNNQNKYKN 432
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.4 bits (43), Expect = 8.8
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = -2
Query: 133 HLTSLLDDEFELKKSVAS 80
HL++L++ ELKK+++S
Sbjct: 866 HLSTLVEFALELKKALSS 883
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,744
Number of Sequences: 438
Number of extensions: 3433
Number of successful extensions: 20
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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