Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12o13
(773 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M21302-1|AAA36640.1| 72|Homo sapiens protein ( Human small pro... 33 1.1
X53064-1|CAA37239.1| 72|Homo sapiens small proline-rich protei... 33 1.5
M20030-1|AAA36639.1| 72|Homo sapiens protein ( Human small pro... 33 1.5
L05188-1|AAA60576.1| 72|Homo sapiens small proline-rich protei... 33 1.5
BC128049-1|AAI28050.1| 72|Homo sapiens small proline-rich prot... 33 1.5
BC120938-1|AAI20939.1| 72|Homo sapiens small proline-rich prot... 33 1.5
BC096111-1|AAH96111.1| 72|Homo sapiens small proline-rich prot... 33 1.5
BC096110-1|AAH96110.1| 72|Homo sapiens small proline-rich prot... 33 1.5
BC096109-1|AAH96109.1| 72|Homo sapiens small proline-rich prot... 33 1.5
BC096108-1|AAH96108.1| 72|Homo sapiens small proline-rich prot... 33 1.5
AL356867-9|CAI19808.1| 72|Homo sapiens small proline-rich prot... 33 1.5
AL356867-8|CAI19807.1| 72|Homo sapiens small proline-rich prot... 33 1.5
AL356867-7|CAI19806.1| 72|Homo sapiens small proline-rich prot... 33 1.5
AL139417-2|CAI21954.1| 72|Homo sapiens small proline-rich prot... 33 1.5
AL139417-1|CAI21953.1| 72|Homo sapiens small proline-rich prot... 33 1.5
AF333956-1|AAK70943.1| 72|Homo sapiens small proline-rich prot... 33 1.5
AF333955-1|AAK70942.1| 72|Homo sapiens small proline-rich prot... 33 1.5
AF333954-1|AAK70941.1| 72|Homo sapiens small proline-rich prot... 33 1.5
AF333952-1|AAK70940.1| 72|Homo sapiens small proline-rich prot... 33 1.5
BC130511-1|AAI30512.1| 98|Homo sapiens late cornified envelope... 32 2.6
BC130507-1|AAI30508.1| 98|Homo sapiens late cornified envelope... 32 2.6
BC087854-1|AAH87854.1| 98|Homo sapiens late cornified envelope... 32 2.6
AL161636-2|CAI19557.1| 98|Homo sapiens novel small proline ric... 32 2.6
AL591375-2|CAI12099.1| 1652|Homo sapiens NHS-like 1 protein. 31 4.6
AL391669-2|CAI14157.1| 1652|Homo sapiens NHS-like 1 protein. 31 4.6
AB037778-1|BAA92595.1| 836|Homo sapiens KIAA1357 protein protein. 31 4.6
M21539-1|AAA66001.1| 72|Homo sapiens small proline-rich protei... 30 8.0
>M21302-1|AAA36640.1| 72|Homo sapiens protein ( Human small
proline rich protein (sprII) mRNA, clone 174N. ).
Length = 72
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPTPNCPEPCPPPKSPEPCP 37
>X53064-1|CAA37239.1| 72|Homo sapiens small proline-rich protein
protein.
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPTPKCPEPCPPPKCPEPCP 37
>M20030-1|AAA36639.1| 72|Homo sapiens protein ( Human small
proline rich protein (sprII) mRNA, clone 930. ).
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPTPKCPEPCPPPKCPEPCP 37
>L05188-1|AAA60576.1| 72|Homo sapiens small proline-rich protein 2
protein.
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPTPKCPEPCPPPKCPEPCP 37
>BC128049-1|AAI28050.1| 72|Homo sapiens small proline-rich protein
2A protein.
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPTPKCPEPCPPPKCPEPCP 37
>BC120938-1|AAI20939.1| 72|Homo sapiens small proline-rich protein
2D protein.
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPTPKCPEPCPPPKCPEPCP 37
>BC096111-1|AAH96111.1| 72|Homo sapiens small proline-rich protein
2A protein.
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPTPKCPEPCPPPKCPEPCP 37
>BC096110-1|AAH96110.1| 72|Homo sapiens small proline-rich protein
2A protein.
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPTPKCPEPCPPPKCPEPCP 37
>BC096109-1|AAH96109.1| 72|Homo sapiens small proline-rich protein
2A protein.
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPTPKCPEPCPPPKCPEPCP 37
>BC096108-1|AAH96108.1| 72|Homo sapiens small proline-rich protein
2A protein.
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPTPKCPEPCPPPKCPEPCP 37
>AL356867-9|CAI19808.1| 72|Homo sapiens small proline-rich protein
2B protein.
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPTPKCPEPCPPPKCPEPCP 37
>AL356867-8|CAI19807.1| 72|Homo sapiens small proline-rich protein
2A protein.
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPTPKCPEPCPPPKCPEPCP 37
>AL356867-7|CAI19806.1| 72|Homo sapiens small proline-rich protein
2D protein.
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPTPKCPEPCPPPKCPEPCP 37
>AL139417-2|CAI21954.1| 72|Homo sapiens small proline-rich protein
2F protein.
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPAPKCPEPCPPPKCPEPCP 37
>AL139417-1|CAI21953.1| 72|Homo sapiens small proline-rich protein
2E protein.
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPTPKCPEPCPPPKCPEPCP 37
>AF333956-1|AAK70943.1| 72|Homo sapiens small proline-rich protein
2F protein.
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPAPKCPEPCPPPKCPEPCP 37
>AF333955-1|AAK70942.1| 72|Homo sapiens small proline-rich protein
2E protein.
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPTPKCPEPCPPPKCPEPCP 37
>AF333954-1|AAK70941.1| 72|Homo sapiens small proline-rich protein
2D protein.
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPTPKCPEPCPPPKCPEPCP 37
>AF333952-1|AAK70940.1| 72|Homo sapiens small proline-rich protein
2B protein.
Length = 72
Score = 32.7 bits (71), Expect = 1.5
Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = -3
Query: 189 ELKREKKQPVVCPKDGCKQ-TPPPKLTDPCP 100
+ K+ + P VCP C + PPPK +PCP
Sbjct: 7 QCKQPCQPPPVCPTPKCPEPCPPPKCPEPCP 37
>BC130511-1|AAI30512.1| 98|Homo sapiens late cornified
envelope-like proline-rich 1 protein.
Length = 98
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -3
Query: 240 RLLARNFD--PWVPIPSWTE-LKREKKQPVVCPKDGCKQTPPPKLTDPCPKGNP 88
+LL R F+ PW P+ + L + P CP C + PPK CP P
Sbjct: 38 KLLQRCFEKCPWEKCPAPPKCLPCPSQSPSSCPPQPCTKPCPPKCPSSCPHACP 91
>BC130507-1|AAI30508.1| 98|Homo sapiens late cornified
envelope-like proline-rich 1 protein.
Length = 98
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -3
Query: 240 RLLARNFD--PWVPIPSWTE-LKREKKQPVVCPKDGCKQTPPPKLTDPCPKGNP 88
+LL R F+ PW P+ + L + P CP C + PPK CP P
Sbjct: 38 KLLQRCFEKCPWEKCPAPPKCLPCPSQSPSSCPPQPCTKPCPPKCPSSCPHACP 91
>BC087854-1|AAH87854.1| 98|Homo sapiens late cornified
envelope-like proline-rich 1 protein.
Length = 98
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -3
Query: 240 RLLARNFD--PWVPIPSWTE-LKREKKQPVVCPKDGCKQTPPPKLTDPCPKGNP 88
+LL R F+ PW P+ + L + P CP C + PPK CP P
Sbjct: 38 KLLQRCFEKCPWEKCPAPPKCLPCPSQSPSSCPPQPCTKPCPPKCPSSCPHACP 91
>AL161636-2|CAI19557.1| 98|Homo sapiens novel small proline rich
protein protein.
Length = 98
Score = 31.9 bits (69), Expect = 2.6
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -3
Query: 240 RLLARNFD--PWVPIPSWTE-LKREKKQPVVCPKDGCKQTPPPKLTDPCPKGNP 88
+LL R F+ PW P+ + L + P CP C + PPK CP P
Sbjct: 38 KLLQRCFEKCPWEKCPAPPKCLPCPSQSPSSCPPQPCTKPCPPKCPSSCPHACP 91
>AL591375-2|CAI12099.1| 1652|Homo sapiens NHS-like 1 protein.
Length = 1652
Score = 31.1 bits (67), Expect = 4.6
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = -3
Query: 228 RNFDPWVPIPSWTELKREKKQPVVCPKDGCKQTPPPKLTDPCPKGNPCLNFPIRP 64
+ DP V P P CP D PPP C +G+P + P+ P
Sbjct: 922 KKLDPAVGSPPAPPPPPVPSPPFPCPADRSPFLPPPPPVTDCSQGSPLPHSPVFP 976
>AL391669-2|CAI14157.1| 1652|Homo sapiens NHS-like 1 protein.
Length = 1652
Score = 31.1 bits (67), Expect = 4.6
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = -3
Query: 228 RNFDPWVPIPSWTELKREKKQPVVCPKDGCKQTPPPKLTDPCPKGNPCLNFPIRP 64
+ DP V P P CP D PPP C +G+P + P+ P
Sbjct: 922 KKLDPAVGSPPAPPPPPVPSPPFPCPADRSPFLPPPPPVTDCSQGSPLPHSPVFP 976
>AB037778-1|BAA92595.1| 836|Homo sapiens KIAA1357 protein protein.
Length = 836
Score = 31.1 bits (67), Expect = 4.6
Identities = 16/55 (29%), Positives = 21/55 (38%)
Frame = -3
Query: 228 RNFDPWVPIPSWTELKREKKQPVVCPKDGCKQTPPPKLTDPCPKGNPCLNFPIRP 64
+ DP V P P CP D PPP C +G+P + P+ P
Sbjct: 148 KKLDPAVGSPPAPPPPPVPSPPFPCPADRSPFLPPPPPVTDCSQGSPLPHSPVFP 202
>M21539-1|AAA66001.1| 72|Homo sapiens small proline-rich protein
protein.
Length = 72
Score = 30.3 bits (65), Expect = 8.0
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Frame = -3
Query: 180 REKKQPVVCPKDGCKQT-PPPKLTDPCPKGNPCLNFPI 70
R K+P CP C + PPPK PCP +P+
Sbjct: 19 RLPKRPEPCPPLKCPEPCPPPKCPQPCPPQQCQQKYPL 56
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,241,292
Number of Sequences: 237096
Number of extensions: 2019050
Number of successful extensions: 5515
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5459
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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