Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12o08
(720 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 419 e-117
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 416 e-116
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 412 e-115
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 402 e-112
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 165 2e-41
03_01_0034 + 318432-318825,318902-319851 165 2e-41
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 165 2e-41
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 165 3e-41
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 163 1e-40
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 163 1e-40
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 163 1e-40
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 159 2e-39
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 80 2e-15
05_05_0013 - 21509307-21509493,21509762-21510123 34 0.099
05_07_0242 + 28615573-28616304 33 0.30
01_06_1014 - 33810112-33811995 31 0.70
11_06_0030 - 19415263-19415388,19415649-19415728,19416196-194162... 31 0.92
07_03_1418 - 26421341-26421527,26421618-26423157,26424293-26424524 31 0.92
05_01_0041 + 281427-281549,281671-281730,281822-281868,282013-28... 30 2.1
09_01_0005 - 193214-193228,193659-193776,193876-194072,194534-19... 29 2.8
02_05_0316 - 27825871-27826509 29 2.8
08_01_0496 + 4319646-4320371,4321007-4321045 29 3.7
06_03_1205 - 28406183-28406218,28406462-28406548,28406769-284068... 29 3.7
01_01_1149 - 9134390-9134600,9134732-9134790,9135650-9135724,913... 29 3.7
07_03_1691 - 28726307-28726323,28726588-28726953,28727483-287275... 29 4.9
04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065 29 4.9
04_03_0664 + 18501248-18502802,18503370-18505054 28 6.5
03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584 28 6.5
03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964 28 6.5
02_02_0574 - 11701359-11701460,11701469-11701570,11701725-117019... 28 6.5
01_01_1078 + 8489872-8490168,8490280-8490462,8490667-8490908,849... 28 6.5
09_04_0501 + 18153252-18153453,18153973-18154224,18154809-181550... 28 8.6
09_01_0139 - 2074193-2077146,2077549-2078043,2078983-2079190 28 8.6
03_06_0709 - 35670153-35670350,35671206-35671259,35672444-356725... 28 8.6
01_04_0043 + 15375459-15377606 28 8.6
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 419 bits (1032), Expect = e-117
Identities = 187/220 (85%), Positives = 206/220 (93%)
Frame = -2
Query: 716 LSAPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 537
+ PTYTNLNRLI QI+SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAPVISA
Sbjct: 219 IERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISA 278
Query: 536 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 357
EKAYHEQLSV EITNA FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTK
Sbjct: 279 EKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK 338
Query: 356 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 177
RT+QFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN TA+AE ++R+DHKFDLM
Sbjct: 339 RTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTAVAEVFSRIDHKFDLM 398
Query: 176 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 57
YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 399 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 438
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 416 bits (1024), Expect = e-116
Identities = 184/221 (83%), Positives = 207/221 (93%)
Frame = -2
Query: 716 LSAPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 537
+ PTYTNLNRL+ Q++SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L +YAPVISA
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISA 278
Query: 536 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 357
EKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTK
Sbjct: 279 EKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK 338
Query: 356 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 177
RTIQFVDWCPTGFK GINYQPP+VVP GDLAKVQRAVCM+SN+T++ E ++R+DHKFDLM
Sbjct: 339 RTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTSVVEVFSRIDHKFDLM 398
Query: 176 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 54
Y+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +S
Sbjct: 399 YSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAES 439
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 412 bits (1015), Expect = e-115
Identities = 183/220 (83%), Positives = 206/220 (93%)
Frame = -2
Query: 716 LSAPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 537
+ PTYTNLNRL+ Q++SS+TASLRFDGALNVD+ EFQTNLVPYPRIHF L +YAPVISA
Sbjct: 219 IERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYPRIHFMLSSYAPVISA 278
Query: 536 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 357
EKAYHEQLSVAEITN+ FEP++ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ATIKTK
Sbjct: 279 EKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTK 338
Query: 356 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 177
RTIQFVDWCPTGFK GINYQPP+VVPGGDLAKVQRAVCM+SN+T++ E ++R+D KFDLM
Sbjct: 339 RTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTSVVEVFSRIDIKFDLM 398
Query: 176 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 57
Y+KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 399 YSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGSE 438
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 402 bits (989), Expect = e-112
Identities = 177/220 (80%), Positives = 201/220 (91%)
Frame = -2
Query: 716 LSAPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 537
+ PTYTNLNRLI Q++SS+T SLRFDGA+NVD+TEFQTNLVPYPRIHF L +YAP+IS
Sbjct: 300 IERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPIISV 359
Query: 536 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 357
EKA+HEQ SV EITN+ FEPA+ M KCDPRHGKYMACC++YRGDVVPKDVNAA+ +IKT+
Sbjct: 360 EKAFHEQHSVPEITNSVFEPASVMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVHSIKTR 419
Query: 356 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 177
RT+QFVDWCPTGFK GINYQPPT VPGGDLAKV+RAVCM+SN TA+AE ++R+D KFDLM
Sbjct: 420 RTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTAVAEVFSRIDRKFDLM 479
Query: 176 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMD 57
YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG +
Sbjct: 480 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE 519
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 165 bits (402), Expect = 2e-41
Identities = 76/216 (35%), Positives = 125/216 (57%)
Frame = -2
Query: 716 LSAPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 537
L+ PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 LATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR 276
Query: 536 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 357
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K
Sbjct: 277 GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNK 336
Query: 356 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 177
+ FV+W P K + PP ++ A + N+T+I E + R+ +F M
Sbjct: 337 NSSYFVEWIPNNVKSSVCDIPP--------RGLKMAATFVGNSTSIQEMFRRVSEQFTAM 388
Query: 176 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 69
+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 389 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 165 bits (402), Expect = 2e-41
Identities = 76/216 (35%), Positives = 126/216 (58%)
Frame = -2
Query: 716 LSAPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 537
L+ P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 LTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR 276
Query: 536 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 357
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K
Sbjct: 277 GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNK 336
Query: 356 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 177
+ FV+W P K + PPT ++ A + N+T+I E + R+ +F M
Sbjct: 337 NSSYFVEWIPNNVKSTVCDIPPT--------GLKMASTFIGNSTSIQEMFRRVSEQFTAM 388
Query: 176 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 69
+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 389 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 165 bits (402), Expect = 2e-41
Identities = 76/216 (35%), Positives = 125/216 (57%)
Frame = -2
Query: 716 LSAPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 537
L+ PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 LATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR 276
Query: 536 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 357
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K
Sbjct: 277 GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNK 336
Query: 356 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 177
+ FV+W P K + PP ++ A + N+T+I E + R+ +F M
Sbjct: 337 NSSYFVEWIPNNVKSSVCDIPPN--------GLKMASTFIGNSTSIQEMFRRVSEQFTAM 388
Query: 176 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 69
+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 389 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 165 bits (401), Expect = 3e-41
Identities = 76/216 (35%), Positives = 125/216 (57%)
Frame = -2
Query: 716 LSAPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 537
L+ PT+ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 LATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR 276
Query: 536 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 357
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K
Sbjct: 277 GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMLNVQNK 336
Query: 356 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 177
+ FV+W P K + PP ++ A + N+T+I E + R+ +F M
Sbjct: 337 NSSYFVEWIPNNVKSSVCDIPP--------IGLKMASTFIGNSTSIQEMFRRVSEQFTAM 388
Query: 176 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 69
+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 389 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQ 424
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 163 bits (397), Expect = 1e-40
Identities = 75/216 (34%), Positives = 124/216 (57%)
Frame = -2
Query: 716 LSAPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 537
L+ P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 238 LTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR 297
Query: 536 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 357
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K
Sbjct: 298 GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNK 357
Query: 356 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 177
+ FV+W P K + PP + A + N+T+I E + R+ +F M
Sbjct: 358 NSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAM 409
Query: 176 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 69
+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 410 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 445
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 163 bits (397), Expect = 1e-40
Identities = 75/216 (34%), Positives = 124/216 (57%)
Frame = -2
Query: 716 LSAPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 537
L+ P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 217 LTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR 276
Query: 536 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 357
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K
Sbjct: 277 GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNK 336
Query: 356 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 177
+ FV+W P K + PP + A + N+T+I E + R+ +F M
Sbjct: 337 NSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFIGNSTSIQEMFRRVSEQFTAM 388
Query: 176 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 69
+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 389 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 424
>05_04_0306 + 20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 163 bits (396), Expect = 1e-40
Identities = 75/216 (34%), Positives = 124/216 (57%)
Frame = -2
Query: 716 LSAPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 537
L+ P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 397 LTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR 456
Query: 536 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 357
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K
Sbjct: 457 GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNK 516
Query: 356 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 177
+ FV+W P K + PP + A + N+T+I E + R+ +F M
Sbjct: 517 NSSYFVEWIPNNVKSSVCDIPP--------RGLSMASTFVGNSTSIQEMFRRVSEQFTAM 568
Query: 176 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 69
+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 569 FRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 604
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 159 bits (387), Expect = 2e-39
Identities = 74/216 (34%), Positives = 123/216 (56%)
Frame = -2
Query: 716 LSAPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISA 537
L+ P++ +LN LI +S +T LRF G LN DL + NL+P+PR+HF +V +AP+ S
Sbjct: 233 LTNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSR 292
Query: 536 EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK 357
+ L+V E+T ++ N M DPRHG+Y+ ++RG + K+V+ + ++ K
Sbjct: 293 GSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRMSTKEVDEQMINVQNK 352
Query: 356 RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM 177
+ FV+W P K + PP + A + N+T+I E + R+ +F M
Sbjct: 353 NSSYFVEWIPNNVKSSVCDIPP--------VGLSMASTFVGNSTSIQEMFRRVSEQFTAM 404
Query: 176 YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 69
+ ++AF+HWY EGM+E EF+EA ++ L +Y++
Sbjct: 405 FRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQ 440
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 79.8 bits (188), Expect = 2e-15
Identities = 55/225 (24%), Positives = 110/225 (48%), Gaps = 10/225 (4%)
Frame = -2
Query: 716 LSAPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPV-IS 540
L+ PT+ N L+ ++S+ T +LR+ G +N DL +L+P PR HF + Y P+ +
Sbjct: 220 LANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTPRCHFLMTGYTPLTVE 279
Query: 539 AEKAYHEQLSVAEITNACFEPANQMVKCDPRH-----GKYMACCMLYRGDVVPKDVNAAI 375
+ + +V ++ + N MV R+ KY++ + +G+V P V+ ++
Sbjct: 280 RQVNMIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILNIIQGEVDPTQVHESL 339
Query: 374 ATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLD 195
I+ ++ + F++W P A +Q + ML+N T+I +++
Sbjct: 340 QRIRERKLVNFIEWGP--------------------ASIQVSGLMLANHTSIRHLFSKCL 379
Query: 194 HKFDLMYAKRAFVHWY----VGEGMEEGEFSEAREDLAALEKDYE 72
+++ + K+AF+ Y + E + EF E+RE + +L +Y+
Sbjct: 380 GQYEKLRKKQAFLDNYRKFPMFEDNDLSEFDESREIIESLVDEYK 424
>05_05_0013 - 21509307-21509493,21509762-21510123
Length = 182
Score = 34.3 bits (75), Expect = 0.099
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 513 KLFMVGL--LGRDDWRVRDQWEVDTGVRHQVSLELGEVHIQSAVESQRSSDRGDNLSDET 686
+LF+ GL GR DWR +W V T QV+ + I+ A S R + ++ D T
Sbjct: 121 RLFLEGLEKYGRGDWRNISRWSVKTRTPTQVASHAQKFFIRQANASSRGDSKRKSIHDIT 180
>05_07_0242 + 28615573-28616304
Length = 243
Score = 32.7 bits (71), Expect = 0.30
Identities = 20/61 (32%), Positives = 27/61 (44%)
Frame = +2
Query: 26 LRLPHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWRT*GRTCGQGE 205
L +P P R P LL P + QP PH L PP+P+ T + T + +G
Sbjct: 91 LLIPSPPTPRVP--LLMPPPQPQPHPHPQHPYLHPPFPYHHTPSGSGGTTTESSSEERGP 148
Query: 206 P 208
P
Sbjct: 149 P 149
>01_06_1014 - 33810112-33811995
Length = 627
Score = 31.5 bits (68), Expect = 0.70
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -2
Query: 173 AKRAFVHWYVGEGMEEGEFSEAREDL 96
+KRA +HW++GEG+ ++ ED+
Sbjct: 187 SKRAMIHWWIGEGLVAATRNQTAEDV 212
>11_06_0030 -
19415263-19415388,19415649-19415728,19416196-19416232,
19416338-19416460,19417195-19417242,19417335-19417378,
19417461-19417506,19417581-19417623,19418329-19418422,
19418503-19418604,19419936-19420014,19420698-19420964
Length = 362
Score = 31.1 bits (67), Expect = 0.92
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +3
Query: 369 GSDGRVHILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEACVCDLGDGKLFMVG 530
G + ILG+ +TT ++T + + GV + G+ C G LF+ G
Sbjct: 166 GHGHKTSILGFSITTSEYTPRLIKNLDGVKIKRIAAGMLHSACIDEKGTLFIFG 219
>07_03_1418 - 26421341-26421527,26421618-26423157,26424293-26424524
Length = 652
Score = 31.1 bits (67), Expect = 0.92
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Frame = +3
Query: 345 LDSTLGFDGSDGRVHILGY-DVTTVQHTASHVLAMTGVAFHHLVGGLE 485
+ S L G G V I Y D+ + + +H L+ TG++ +H+ G++
Sbjct: 33 MSSALAAAGYTGPVSISAYGDIGRIGNAVTHALSSTGISLNHVPAGIK 80
>05_01_0041 +
281427-281549,281671-281730,281822-281868,282013-282089,
285368-285440,286193-286281,286665-286711,286805-286885,
287011-287179,287381-287600,287679-287744,288194-288310,
288591-288628,288935-289032
Length = 434
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/43 (34%), Positives = 20/43 (46%)
Frame = +2
Query: 35 PHPRLQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARK 163
P PR + P R + +P P RRT P P H T +R+
Sbjct: 265 PSPRRRSPPSRRVESPRCRPDSPPIRRRTAPSPIRHGGTPSRR 307
>09_01_0005 -
193214-193228,193659-193776,193876-194072,194534-195493
Length = 429
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = -1
Query: 537 REGLP*TAFRRRDHKRMLRARQPDGEMRPPSWQVHGL 427
REG P RR++ KRML RQP + Q+HG+
Sbjct: 75 REGPPAPEARRKERKRMLMPRQPSHD------QIHGI 105
>02_05_0316 - 27825871-27826509
Length = 212
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 441 AMTGVAFHHLVGGLEACVCDLGDGKLFMVGLLGRDDWR 554
A+ V F LV A VC GD + + G+ GRD+ R
Sbjct: 93 ALPVVRFDELVASAPAAVCGGGDCAVCLSGICGRDEVR 130
>08_01_0496 + 4319646-4320371,4321007-4321045
Length = 254
Score = 29.1 bits (62), Expect = 3.7
Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 9/107 (8%)
Frame = +3
Query: 309 TDLETGWTPVDELDSTLGFDGSDGRV----HILGYDVTTVQHTASHVLAMTGVAFHHLVG 476
T L+ W P+ + L FDG +GR+ ++ ++ T + +L + G H
Sbjct: 40 TALDAQWIPLPLIQRVLVFDGGEGRIPPFEDVVAALRASLAETVARLLPLAGRIVHLPET 99
Query: 477 GLEACVCD----LGDGKLFMVGLL-GRDDWRVRDQWEVDTGVRHQVS 602
G A C G G F+V G D RV + D + Q++
Sbjct: 100 GEAAIDCSGRGVAGGGVRFVVAECGGADAARVARDADHDVALLEQLA 146
>06_03_1205 -
28406183-28406218,28406462-28406548,28406769-28406830,
28407968-28408184,28408793-28408957,28409145-28409250,
28409830-28410071,28410493-28410605,28410848-28411043,
28411681-28411827,28412034-28412218,28412478-28412592,
28413237-28413728
Length = 720
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 95 PGPHGLRRTLPPPYPHRRTSARKH 166
P H LR + PPP+PH R H
Sbjct: 19 PSAHLLRLSRPPPFPHLRRRCAPH 42
>01_01_1149 -
9134390-9134600,9134732-9134790,9135650-9135724,
9135815-9135934,9136012-9136183,9136277-9136335,
9136516-9136572,9136900-9136998,9137088-9137114,
9137607-9137649,9137779-9138023
Length = 388
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 480 LEACVCDLGDGKLFMVGLLGRDDWRVRDQWEVDTGVRHQ 596
L+ C+C DG +GLL W V + ++ T +H+
Sbjct: 28 LKYCLCSTRDGMALTLGLLSVISWGVAEVPQIITNYKHK 66
>07_03_1691 -
28726307-28726323,28726588-28726953,28727483-28727567,
28728255-28728387,28729793-28730328
Length = 378
Score = 28.7 bits (61), Expect = 4.9
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 29 RLPHPRLQRSPCRLLRNPS-RGQPGPHGLRRTLPPPYPHRRTSARKHAWR 175
R P+P L PC L PS G G G PPP PH R + + A+R
Sbjct: 15 RSPNPNLNL-PCPLPPIPSCGGGGGGAGPTPPPPPPPPHHRRARSEVAFR 63
>04_04_1261 - 32186769-32186909,32188493-32188612,32188742-32189065
Length = 194
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 632 ALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKAYHEQLSVA 504
A ++D T +N VPY + TY P ++ K E+ S A
Sbjct: 126 ASSIDHTLNSSNAVPYDGTRYEQTTYGPTLTKRKPGKERSSTA 168
>04_03_0664 + 18501248-18502802,18503370-18505054
Length = 1079
Score = 28.3 bits (60), Expect = 6.5
Identities = 8/34 (23%), Positives = 22/34 (64%)
Frame = +3
Query: 390 ILGYDVTTVQHTASHVLAMTGVAFHHLVGGLEAC 491
+L +++ ++H + ++ + +++HHL L+AC
Sbjct: 416 MLRENISNIEHNSEGIMKILRLSYHHLAPHLQAC 449
>03_05_0887 - 28527602-28530555,28531296-28531790,28532377-28532584
Length = 1218
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 549 WRVRDQ--WEVDTGVRHQVSLELGEVHIQSAVESQRSSDRGDNLSDETIQVGV 701
WR+ D WEVDT H ++ H + + S D+ + D T + G+
Sbjct: 231 WRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGI 283
>03_05_0886 - 28516210-28519163,28519577-28520071,28520757-28520964
Length = 1218
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 549 WRVRDQ--WEVDTGVRHQVSLELGEVHIQSAVESQRSSDRGDNLSDETIQVGV 701
WR+ D WEVDT H ++ H + + S D+ + D T + G+
Sbjct: 231 WRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRIWDATKRTGI 283
>02_02_0574 -
11701359-11701460,11701469-11701570,11701725-11701922,
11702090-11704052,11705312-11706126
Length = 1059
Score = 28.3 bits (60), Expect = 6.5
Identities = 9/35 (25%), Positives = 24/35 (68%)
Frame = -2
Query: 464 VKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKT 360
++C PR+ +Y++C L ++P+ +N+++ ++ T
Sbjct: 737 IRCSPRYLRYLSCGQL---SILPRWINSSLLSLST 768
>01_01_1078 +
8489872-8490168,8490280-8490462,8490667-8490908,
8490988-8491240
Length = 324
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +3
Query: 465 HLVGGLEACVCDLGDGKLFMVGLLGRDDWRVRDQWEV 575
HLVG L A + DLG ++F+ G DW W++
Sbjct: 83 HLVGDLVALIADLGRPQVFVAG----HDWGAVVAWQL 115
>09_04_0501 +
18153252-18153453,18153973-18154224,18154809-18155015,
18155198-18157046,18157334-18157381,18158222-18158291,
18158380-18158475,18158583-18158621,18158714-18158924,
18159037-18159178,18159275-18159407,18159762-18159878
Length = 1121
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +2
Query: 47 LQRSPCRLLRNPSRGQPGPHGLRRTLPPPYPHRRTSARKHAWR 175
L R+ CR+ +P +P H L +P P+PH +A + A+R
Sbjct: 285 LLRAACRVRASPCL-RPLAHHLLDHIPRPHPHLLHAAARLAYR 326
>09_01_0139 - 2074193-2077146,2077549-2078043,2078983-2079190
Length = 1218
Score = 27.9 bits (59), Expect = 8.6
Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 2/53 (3%)
Frame = +3
Query: 549 WRVRDQ--WEVDTGVRHQVSLELGEVHIQSAVESQRSSDRGDNLSDETIQVGV 701
WR+ D WEVDT H ++ H + + S D+ + D T + G+
Sbjct: 231 WRMNDTKAWEVDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATKRTGI 283
>03_06_0709 -
35670153-35670350,35671206-35671259,35672444-35672527,
35672688-35672902,35673959-35674058,35674178-35674276
Length = 249
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +3
Query: 45 AFSGVHADFFVILLEGSQVLTG 110
+F G ADFF +LL G+ VLTG
Sbjct: 88 SFRGRTADFFYMLLFGATVLTG 109
>01_04_0043 + 15375459-15377606
Length = 715
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = -2
Query: 419 LYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCM 240
LY D DV A + + +Q ++ P G+++G PP V G + + R +C
Sbjct: 180 LYGQDQGDHDVQAPPLLVMGEEKLQ-IEARPQGYRIGRTSPPPLCVDAGHVVTMDR-ICR 237
Query: 239 L 237
L
Sbjct: 238 L 238
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,493,649
Number of Sequences: 37544
Number of extensions: 576790
Number of successful extensions: 2407
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 2239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2396
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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