Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12o07
(475 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ406951-1|CAC27590.1| 154|Homo sapiens keratin associated prot... 31 2.0
BC110619-1|AAI10620.1| 174|Homo sapiens keratin associated prot... 30 3.6
AY672837-1|AAT77412.1| 546|Homo sapiens immunoglobulin-like dom... 30 3.6
AY134857-1|AAN10256.1| 265|Homo sapiens unknown protein. 30 3.6
AL445933-4|CAI14538.1| 2406|Homo sapiens human immunodeficiency ... 30 3.6
AL445933-3|CAI14537.1| 2405|Homo sapiens human immunodeficiency ... 30 3.6
AJ406946-1|CAC27585.1| 174|Homo sapiens keratin associated prot... 30 3.6
AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J recom... 30 3.6
AB046775-1|BAB13381.2| 2414|Homo sapiens KIAA1555 protein protein. 30 3.6
BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated prot... 30 4.7
BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated prot... 30 4.7
BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated prot... 30 4.7
BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated prot... 30 4.7
AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated prot... 30 4.7
AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated prot... 30 4.7
AJ406936-1|CAC27575.1| 166|Homo sapiens keratin associated prot... 30 4.7
AJ296168-1|CAC27563.1| 106|Homo sapiens keratin associated prot... 30 4.7
AB126076-1|BAD20203.1| 165|Homo sapiens keratin associated prot... 30 4.7
X65644-1|CAA46596.1| 2500|Homo sapiens MBP-2 (MHC Binding Protei... 29 6.2
DQ231041-1|ABB16331.1| 2446|Homo sapiens c-myc intron-binding pr... 29 6.2
BC121094-1|AAI21095.1| 154|Homo sapiens keratin associated prot... 29 6.2
BC117287-1|AAI17288.1| 174|Homo sapiens keratin associated prot... 29 6.2
BC069560-1|AAH69560.1| 173|Homo sapiens KRTAP9-2 protein protein. 29 6.2
AL023584-1|CAA19042.1| 2446|Homo sapiens human immunodeficiency ... 29 6.2
AJ406948-1|CAC27587.1| 154|Homo sapiens keratin associated prot... 29 6.2
AF153836-1|AAF81365.1| 2446|Homo sapiens human immunodeficiency ... 29 6.2
AJ406941-1|CAC27580.1| 191|Homo sapiens keratin associated prot... 29 8.2
AJ406937-1|CAC27576.1| 186|Homo sapiens keratin associated prot... 29 8.2
>AJ406951-1|CAC27590.1| 154|Homo sapiens keratin associated protein
9.9 protein.
Length = 154
Score = 31.1 bits (67), Expect = 2.0
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -3
Query: 302 CCCYCWNPCAKPACCSNEYWCYTRHRPT 219
C C PC +PACC N T +PT
Sbjct: 43 CVSSCCQPCCRPACCQNTCCRTTCCQPT 70
Score = 29.5 bits (63), Expect = 6.2
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = -3
Query: 308 THCCCYCWNPCAKPACCSNEYWCYTRHRPT--STLQETTTLRRRDCLYQWRRNCLVP 144
THCC +PC +P CC T +PT +T T + C+ + C P
Sbjct: 2 THCC----SPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRP 54
>BC110619-1|AAI10620.1| 174|Homo sapiens keratin associated protein
9-2 protein.
Length = 174
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -3
Query: 308 THCCCYCWNPCAKPACCSNEYWCYTRHRPT--STLQETTTLRRRDCLYQWRRNCLVP 144
THCC +PC +P CC T +PT +T T+ + C+ + C P
Sbjct: 2 THCC----SPCCQPTCCRTTCCRTTCWKPTTVTTCSSTSCCQPACCVSSCCQPCCRP 54
>AY672837-1|AAT77412.1| 546|Homo sapiens immunoglobulin-like
domain-containing receptor 1 alpha protein.
Length = 546
Score = 30.3 bits (65), Expect = 3.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 305 HCCCYCWNPCAKPACCSNEYWCYTRHR 225
+CCCY PC CC E RHR
Sbjct: 196 YCCCYIRCPCCPAHCCCPEE-ALARHR 221
>AY134857-1|AAN10256.1| 265|Homo sapiens unknown protein.
Length = 265
Score = 30.3 bits (65), Expect = 3.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -3
Query: 305 HCCCYCWNPCAKPACCSNEYWCYTRHR 225
+CCCY PC CC E RHR
Sbjct: 196 YCCCYIRCPCCPAHCCCPEE-ALARHR 221
>AL445933-4|CAI14538.1| 2406|Homo sapiens human immunodeficiency
virus type I enhancer binding protein 3 protein.
Length = 2406
Score = 30.3 bits (65), Expect = 3.6
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -3
Query: 305 HCCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTTLRRRDCLYQWRRN 156
+ C YC PCAKP+ +T RP + + + LY+ R++
Sbjct: 192 YICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKS 241
>AL445933-3|CAI14537.1| 2405|Homo sapiens human immunodeficiency
virus type I enhancer binding protein 3 protein.
Length = 2405
Score = 30.3 bits (65), Expect = 3.6
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -3
Query: 305 HCCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTTLRRRDCLYQWRRN 156
+ C YC PCAKP+ +T RP + + + LY+ R++
Sbjct: 192 YICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKS 241
>AJ406946-1|CAC27585.1| 174|Homo sapiens keratin associated protein
9.2 protein.
Length = 174
Score = 30.3 bits (65), Expect = 3.6
Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -3
Query: 308 THCCCYCWNPCAKPACCSNEYWCYTRHRPT--STLQETTTLRRRDCLYQWRRNCLVP 144
THCC +PC +P CC T +PT +T T+ + C+ + C P
Sbjct: 2 THCC----SPCCQPTCCRTTCCRTTCWKPTTVTTCSSTSCCQPACCVSSCCQPCCRP 54
>AF278765-1|AAK01082.1| 2406|Homo sapiens kappa B and V(D)J
recombination signal sequences binding protein protein.
Length = 2406
Score = 30.3 bits (65), Expect = 3.6
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -3
Query: 305 HCCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTTLRRRDCLYQWRRN 156
+ C YC PCAKP+ +T RP + + + LY+ R++
Sbjct: 192 YICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKS 241
>AB046775-1|BAB13381.2| 2414|Homo sapiens KIAA1555 protein protein.
Length = 2414
Score = 30.3 bits (65), Expect = 3.6
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = -3
Query: 305 HCCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTTLRRRDCLYQWRRN 156
+ C YC PCAKP+ +T RP + + + LY+ R++
Sbjct: 201 YICQYCSRPCAKPSVLQKHIRSHTGERPYPCGPCGFSFKTKSNLYKHRKS 250
>BC074982-1|AAH74982.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 29.9 bits (64), Expect = 4.7
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 308 THCCCYCWNPCAKPACCSNEYW 243
THCC +PC +P CC W
Sbjct: 2 THCC----SPCCQPTCCRTTCW 19
>BC074981-1|AAH74981.1| 159|Homo sapiens keratin associated protein
9-8 protein.
Length = 159
Score = 29.9 bits (64), Expect = 4.7
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 308 THCCCYCWNPCAKPACCSNEYW 243
THCC +PC +P CC W
Sbjct: 2 THCC----SPCCQPTCCRTTCW 19
>BC074919-1|AAH74919.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 29.9 bits (64), Expect = 4.7
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 308 THCCCYCWNPCAKPACCSNEYW 243
THCC +PC +P CC W
Sbjct: 2 THCC----SPCCQPTCCRTTCW 19
>BC074918-1|AAH74918.1| 159|Homo sapiens keratin associated protein
9-3 protein.
Length = 159
Score = 29.9 bits (64), Expect = 4.7
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 308 THCCCYCWNPCAKPACCSNEYW 243
THCC +PC +P CC W
Sbjct: 2 THCC----SPCCQPTCCRTTCW 19
>AJ406950-1|CAC27589.1| 159|Homo sapiens keratin associated protein
9.8 protein.
Length = 159
Score = 29.9 bits (64), Expect = 4.7
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 308 THCCCYCWNPCAKPACCSNEYW 243
THCC +PC +P CC W
Sbjct: 2 THCC----SPCCQPTCCRTTCW 19
>AJ406947-1|CAC27586.1| 159|Homo sapiens keratin associated protein
9.3 protein.
Length = 159
Score = 29.9 bits (64), Expect = 4.7
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 308 THCCCYCWNPCAKPACCSNEYW 243
THCC +PC +P CC W
Sbjct: 2 THCC----SPCCQPTCCRTTCW 19
>AJ406936-1|CAC27575.1| 166|Homo sapiens keratin associated protein
4.4 protein.
Length = 166
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = -3
Query: 302 CCC--YCWNPCAKPACCSNEYWCYTRHRPT 219
CCC YC + C +P CC T RP+
Sbjct: 120 CCCPSYCVSSCCRPQCCQTTCCRTTCCRPS 149
>AJ296168-1|CAC27563.1| 106|Homo sapiens keratin associated protein
protein.
Length = 106
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Frame = -3
Query: 302 CCC--YCWNPCAKPACCSNEYWCYTRHRPT 219
CCC YC + C +P CC T RP+
Sbjct: 60 CCCPSYCVSSCCRPQCCQTTRCRTTCCRPS 89
>AB126076-1|BAD20203.1| 165|Homo sapiens keratin associated protein
protein.
Length = 165
Score = 29.9 bits (64), Expect = 4.7
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 2/22 (9%)
Frame = -3
Query: 311 RTHCC--CYCWNPCAKPACCSN 252
++ CC C C + C KP CCS+
Sbjct: 113 QSSCCKPCCCQSSCCKPCCCSS 134
>X65644-1|CAA46596.1| 2500|Homo sapiens MBP-2 (MHC Binding
Protein-2) protein.
Length = 2500
Score = 29.5 bits (63), Expect = 6.2
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = -3
Query: 305 HCCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTTLRRRDCLYQWRRN 156
+ C YC CAKP+ +T RP + + + + LY+ R++
Sbjct: 243 YICPYCSRACAKPSVLKKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKS 292
>DQ231041-1|ABB16331.1| 2446|Homo sapiens c-myc intron-binding
protein 1 protein.
Length = 2446
Score = 29.5 bits (63), Expect = 6.2
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = -3
Query: 305 HCCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTTLRRRDCLYQWRRN 156
+ C YC CAKP+ +T RP + + + + LY+ R++
Sbjct: 189 YVCPYCSRACAKPSVLKKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKS 238
>BC121094-1|AAI21095.1| 154|Homo sapiens keratin associated protein
9-4 protein.
Length = 154
Score = 29.5 bits (63), Expect = 6.2
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = -3
Query: 308 THCCCYCWNPCAKPACCSNEYWCYTRHRPT--STLQETTTLRRRDCLYQWRRNCLVP 144
THCC +PC +P CC T +PT +T T + C+ + C P
Sbjct: 2 THCC----SPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRP 54
>BC117287-1|AAI17288.1| 174|Homo sapiens keratin associated protein
9-2 protein.
Length = 174
Score = 29.5 bits (63), Expect = 6.2
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = -3
Query: 308 THCCCYCWNPCAKPACCSNEYWCYTRHRPT--STLQETTTLRRRDCLYQWRRNCLVP 144
THCC +PC +P CC T +PT +T T + C+ + C P
Sbjct: 2 THCC----SPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPACCVSSCCQPCCRP 54
Score = 29.5 bits (63), Expect = 6.2
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 302 CCCYCWNPCAKPACCSNEYWCYTRHRPT 219
C C PC +P CC N T +PT
Sbjct: 43 CVSSCCQPCCRPTCCQNTCCRTTCCQPT 70
>BC069560-1|AAH69560.1| 173|Homo sapiens KRTAP9-2 protein protein.
Length = 173
Score = 29.5 bits (63), Expect = 6.2
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = -3
Query: 308 THCCCYCWNPCAKPACCSNEYWCYTRHRPT--STLQETTTLRRRDCLYQWRRNCLVP 144
THCC +PC +P CC T +PT +T T + C+ + C P
Sbjct: 1 THCC----SPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPACCVSSCCQPCCRP 53
Score = 29.5 bits (63), Expect = 6.2
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = -3
Query: 302 CCCYCWNPCAKPACCSNEYWCYTRHRPT 219
C C PC +P CC N T +PT
Sbjct: 42 CVSSCCQPCCRPTCCQNTCCRTTCCQPT 69
>AL023584-1|CAA19042.1| 2446|Homo sapiens human immunodeficiency
virus type I enhancer binding protein 2 protein.
Length = 2446
Score = 29.5 bits (63), Expect = 6.2
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = -3
Query: 305 HCCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTTLRRRDCLYQWRRN 156
+ C YC CAKP+ +T RP + + + + LY+ R++
Sbjct: 189 YICPYCSRACAKPSVLKKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKS 238
>AJ406948-1|CAC27587.1| 154|Homo sapiens keratin associated protein
9.4 protein.
Length = 154
Score = 29.5 bits (63), Expect = 6.2
Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Frame = -3
Query: 308 THCCCYCWNPCAKPACCSNEYWCYTRHRPT--STLQETTTLRRRDCLYQWRRNCLVP 144
THCC +PC +P CC T +PT +T T + C+ + C P
Sbjct: 2 THCC----SPCCQPTCCRTTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCRP 54
>AF153836-1|AAF81365.1| 2446|Homo sapiens human immunodeficiency
virus type I enhancer-binding protein 2 protein.
Length = 2446
Score = 29.5 bits (63), Expect = 6.2
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = -3
Query: 305 HCCCYCWNPCAKPACCSNEYWCYTRHRPTSTLQETTTLRRRDCLYQWRRN 156
+ C YC CAKP+ +T RP + + + + LY+ R++
Sbjct: 189 YICPYCSRACAKPSVLKKHIRSHTGERPYPCIPCGFSFKTKSNLYKHRKS 238
>AJ406941-1|CAC27580.1| 191|Homo sapiens keratin associated protein
4.9 protein.
Length = 191
Score = 29.1 bits (62), Expect = 8.2
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 6/63 (9%)
Frame = -3
Query: 311 RTHCC--CYCWNPCAKPACCSNEYWCYTRHRPT---STLQETTTLRRRDCLYQ-WRRNCL 150
RT CC C + C +P CC + T RP+ +T TT R C+ R C
Sbjct: 17 RTTCCRPSCCVSSCCRPQCCQSVCCQPTCSRPSCCQTTCCRTTCYRPSCCVSSCCRPQCC 76
Query: 149 VPI 141
P+
Sbjct: 77 QPV 79
>AJ406937-1|CAC27576.1| 186|Homo sapiens keratin associated protein
4.5 protein.
Length = 186
Score = 29.1 bits (62), Expect = 8.2
Identities = 10/22 (45%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
Frame = -3
Query: 311 RTHCCC--YCWNPCAKPACCSN 252
RT CCC C + C +P CC +
Sbjct: 97 RTTCCCPSCCVSSCCRPQCCQS 118
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,415,245
Number of Sequences: 237096
Number of extensions: 886791
Number of successful extensions: 2046
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2012
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4156838854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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