Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12n03
(468 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D16294-1|BAA03800.1| 397|Homo sapiens mitochondrial 3-oxoacyl-C... 68 2e-11
BC001918-1|AAH01918.1| 397|Homo sapiens acetyl-Coenzyme A acylt... 68 2e-11
D90228-1|BAA14278.1| 427|Homo sapiens mitochondrial acetoacetyl... 53 6e-07
D10511-1|BAA01387.1| 427|Homo sapiens mitochondrial acetoacetyl... 52 1e-06
S70154-1|AAB30856.1| 397|Homo sapiens cytosolic acetoacetyl-coe... 51 2e-06
BC000408-1|AAH00408.1| 397|Homo sapiens ACAT2 protein protein. 51 2e-06
AL135914-6|CAI21850.1| 397|Homo sapiens acetyl-Coenzyme A acety... 51 2e-06
AB208993-1|BAD92230.1| 404|Homo sapiens Acetyl-CoA acetyltransf... 51 2e-06
AF356877-1|AAM00223.1| 397|Homo sapiens acetyl CoA transferase-... 50 4e-06
X65140-1|CAA46270.1| 424|Homo sapiens peroxisomal 3-oxoacyl-CoA... 45 2e-04
X51460-1|CAA35825.1| 326|Homo sapiens 3-oxoacyl-CoA thiolase pr... 45 2e-04
X14813-1|CAA32918.1| 424|Homo sapiens protein ( Human liver mRN... 45 2e-04
X12966-1|CAA31412.1| 424|Homo sapiens protein ( Human mRNA for ... 45 2e-04
BC014474-1|AAH14474.1| 331|Homo sapiens ACAA1 protein protein. 45 2e-04
BC011977-1|AAH11977.1| 424|Homo sapiens acetyl-Coenzyme A acylt... 45 2e-04
BC000635-1|AAH00635.1| 424|Homo sapiens acetyl-Coenzyme A acylt... 45 2e-04
D86850-1|BAA22061.1| 410|Homo sapiens 3-ketoacyl-CoA thiolase b... 38 0.017
D16481-1|BAA03942.1| 474|Homo sapiens 3-ketoacyl-CoA thiolase b... 38 0.017
BC066963-1|AAH66963.1| 475|Homo sapiens hydroxyacyl-Coenzyme A ... 38 0.017
BC030824-1|AAH30824.1| 475|Homo sapiens hydroxyacyl-Coenzyme A ... 38 0.017
BC017564-1|AAH17564.1| 475|Homo sapiens hydroxyacyl-Coenzyme A ... 38 0.017
BC014572-1|AAH14572.1| 475|Homo sapiens hydroxyacyl-Coenzyme A ... 38 0.017
AC010896-2|AAY14644.1| 474|Homo sapiens unknown protein. 38 0.017
U11313-1|AAB41286.1| 547|Homo sapiens sterol carrier protein-X/... 35 0.16
M75884-1|AAA03558.1| 289|Homo sapiens sterol carrier protein-2 ... 35 0.16
M75883-1|AAA03557.1| 547|Homo sapiens sterol carrier protein-X/... 35 0.16
AL445183-3|CAH72590.1| 547|Homo sapiens sterol carrier protein ... 35 0.16
AK131080-1|BAC85130.1| 563|Homo sapiens FLJ00279 protein protein. 30 4.6
>D16294-1|BAA03800.1| 397|Homo sapiens mitochondrial 3-oxoacyl-CoA
thiolase protein.
Length = 397
Score = 67.7 bits (158), Expect = 2e-11
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = -2
Query: 464 SKLNVNGGAIAMGHPVGASGARITAHLAHELRRRGLK 354
SK NVNGGAIA+GHP+G SG+RITAHL HELRRRG K
Sbjct: 339 SKTNVNGGAIALGHPLGGSGSRITAHLVHELRRRGGK 375
>BC001918-1|AAH01918.1| 397|Homo sapiens acetyl-Coenzyme A
acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A
thiolas protein.
Length = 397
Score = 67.7 bits (158), Expect = 2e-11
Identities = 30/37 (81%), Positives = 33/37 (89%)
Frame = -2
Query: 464 SKLNVNGGAIAMGHPVGASGARITAHLAHELRRRGLK 354
SK NVNGGAIA+GHP+G SG+RITAHL HELRRRG K
Sbjct: 339 SKTNVNGGAIALGHPLGGSGSRITAHLVHELRRRGGK 375
>D90228-1|BAA14278.1| 427|Homo sapiens mitochondrial
acetoacetyl-CoA thiolase precursor protein.
Length = 427
Score = 52.8 bits (121), Expect = 6e-07
Identities = 19/32 (59%), Positives = 27/32 (84%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRR 366
K+N+NGGA+++GHP+G SGARI HL H L++
Sbjct: 373 KVNINGGAVSLGHPIGMSGARIVGHLTHALKQ 404
>D10511-1|BAA01387.1| 427|Homo sapiens mitochondrial
acetoacetyl-CoA thiolase protein.
Length = 427
Score = 51.6 bits (118), Expect = 1e-06
Identities = 18/32 (56%), Positives = 27/32 (84%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRR 366
K+N+NGG++++GHP+G SGARI HL H L++
Sbjct: 373 KVNINGGSVSLGHPIGMSGARIVGHLTHALKQ 404
>S70154-1|AAB30856.1| 397|Homo sapiens cytosolic
acetoacetyl-coenzyme A thiolase protein.
Length = 397
Score = 50.8 bits (116), Expect = 2e-06
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRGLKR 351
K+N+ GGAIA+GHP+GASG RI L H L R G R
Sbjct: 341 KVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRSR 377
>BC000408-1|AAH00408.1| 397|Homo sapiens ACAT2 protein protein.
Length = 397
Score = 50.8 bits (116), Expect = 2e-06
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRGLKR 351
K+N+ GGAIA+GHP+GASG RI L H L R G R
Sbjct: 341 KVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRSR 377
>AL135914-6|CAI21850.1| 397|Homo sapiens acetyl-Coenzyme A
acetyltransferase 2 (acetoacetyl Coenzyme A thiolase)
protein.
Length = 397
Score = 50.8 bits (116), Expect = 2e-06
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRGLKR 351
K+N+ GGAIA+GHP+GASG RI L H L R G R
Sbjct: 341 KVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRSR 377
>AB208993-1|BAD92230.1| 404|Homo sapiens Acetyl-CoA
acetyltransferase, cytosolic variant protein.
Length = 404
Score = 50.8 bits (116), Expect = 2e-06
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRGLKR 351
K+N+ GGAIA+GHP+GASG RI L H L R G R
Sbjct: 348 KVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRSR 384
>AF356877-1|AAM00223.1| 397|Homo sapiens acetyl CoA
transferase-like protein protein.
Length = 397
Score = 50.0 bits (114), Expect = 4e-06
Identities = 22/37 (59%), Positives = 26/37 (70%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRGLKR 351
K+N+ GGAIA+GHP+GASG RI L H L R G R
Sbjct: 341 KVNIEGGAIALGHPLGASGCRILVTLLHTLERMGGSR 377
>X65140-1|CAA46270.1| 424|Homo sapiens peroxisomal 3-oxoacyl-CoA
thiolase protein.
Length = 424
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRG 360
K+N GGA+A+GHP+G +GAR L +EL+RRG
Sbjct: 365 KVNPLGGAVALGHPLGCTGARQVITLLNELKRRG 398
>X51460-1|CAA35825.1| 326|Homo sapiens 3-oxoacyl-CoA thiolase
protein.
Length = 326
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRG 360
K+N GGA+A+GHP+G +GAR L +EL+RRG
Sbjct: 267 KVNPLGGAVALGHPLGCTGARQVITLLNELKRRG 300
>X14813-1|CAA32918.1| 424|Homo sapiens protein ( Human liver mRNA
for 3-oxoacyl-CoA thiolase. ).
Length = 424
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRG 360
K+N GGA+A+GHP+G +GAR L +EL+RRG
Sbjct: 365 KVNPLGGAVALGHPLGCTGARQVITLLNELKRRG 398
>X12966-1|CAA31412.1| 424|Homo sapiens protein ( Human mRNA for
3-oxoacyl-CoA peroxisomal thiolase. ).
Length = 424
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRG 360
K+N GGA+A+GHP+G +GAR L +EL+RRG
Sbjct: 365 KVNPLGGAVALGHPLGCTGARQVITLLNELKRRG 398
>BC014474-1|AAH14474.1| 331|Homo sapiens ACAA1 protein protein.
Length = 331
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRG 360
K+N GGA+A+GHP+G +GAR L +EL+RRG
Sbjct: 272 KVNPLGGAVALGHPLGCTGARQAITLLNELKRRG 305
>BC011977-1|AAH11977.1| 424|Homo sapiens acetyl-Coenzyme A
acyltransferase 1 (peroxisomal 3-oxoacyl-Coenzyme A
thiolase) protein.
Length = 424
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRG 360
K+N GGA+A+GHP+G +GAR L +EL+RRG
Sbjct: 365 KVNPLGGAVALGHPLGCTGARQVITLLNELKRRG 398
>BC000635-1|AAH00635.1| 424|Homo sapiens acetyl-Coenzyme A
acyltransferase 1 (peroxisomal 3-oxoacyl-Coenzyme A
thiolase) protein.
Length = 424
Score = 44.8 bits (101), Expect = 2e-04
Identities = 19/34 (55%), Positives = 26/34 (76%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRG 360
K+N GGA+A+GHP+G +GAR L +EL+RRG
Sbjct: 365 KVNPLGGAVALGHPLGCTGARQVITLLNELKRRG 398
>D86850-1|BAA22061.1| 410|Homo sapiens 3-ketoacyl-CoA thiolase
beta-subunit of mitochondrial trifunctional protein
protein.
Length = 410
Score = 37.9 bits (84), Expect = 0.017
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRG 360
K N GG++++GHP GA+G R+ A+ LR+ G
Sbjct: 352 KFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEG 385
>D16481-1|BAA03942.1| 474|Homo sapiens 3-ketoacyl-CoA thiolase
beta-subunit of trifunctional protein protein.
Length = 474
Score = 37.9 bits (84), Expect = 0.017
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRG 360
K N GG++++GHP GA+G R+ A+ LR+ G
Sbjct: 416 KFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEG 449
>BC066963-1|AAH66963.1| 475|Homo sapiens hydroxyacyl-Coenzyme A
dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenz
protein.
Length = 475
Score = 37.9 bits (84), Expect = 0.017
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRG 360
K N GG++++GHP GA+G R+ A+ LR+ G
Sbjct: 417 KFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEG 450
>BC030824-1|AAH30824.1| 475|Homo sapiens hydroxyacyl-Coenzyme A
dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenz
protein.
Length = 475
Score = 37.9 bits (84), Expect = 0.017
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRG 360
K N GG++++GHP GA+G R+ A+ LR+ G
Sbjct: 417 KFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEG 450
>BC017564-1|AAH17564.1| 475|Homo sapiens hydroxyacyl-Coenzyme A
dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenz
protein.
Length = 475
Score = 37.9 bits (84), Expect = 0.017
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRG 360
K N GG++++GHP GA+G R+ A+ LR+ G
Sbjct: 417 KFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEG 450
>BC014572-1|AAH14572.1| 475|Homo sapiens hydroxyacyl-Coenzyme A
dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenz
protein.
Length = 475
Score = 37.9 bits (84), Expect = 0.017
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRG 360
K N GG++++GHP GA+G R+ A+ LR+ G
Sbjct: 417 KFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEG 450
>AC010896-2|AAY14644.1| 474|Homo sapiens unknown protein.
Length = 474
Score = 37.9 bits (84), Expect = 0.017
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = -2
Query: 461 KLNVNGGAIAMGHPVGASGARITAHLAHELRRRG 360
K N GG++++GHP GA+G R+ A+ LR+ G
Sbjct: 416 KFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEG 449
>U11313-1|AAB41286.1| 547|Homo sapiens sterol carrier
protein-X/sterol carrier protein-2 protein.
Length = 547
Score = 34.7 bits (76), Expect = 0.16
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 458 LNVNGGAIAMGHPVGASGARITAHLAHELRRRGLKR 351
+N +GG I+ GHP+GA+G A L +LR KR
Sbjct: 344 INPSGGLISKGHPLGATGLAQCAELCWQLRGEAGKR 379
>M75884-1|AAA03558.1| 289|Homo sapiens sterol carrier protein-2
protein.
Length = 289
Score = 34.7 bits (76), Expect = 0.16
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 458 LNVNGGAIAMGHPVGASGARITAHLAHELRRRGLKR 351
+N +GG I+ GHP+GA+G A L +LR KR
Sbjct: 86 INPSGGLISKGHPLGATGLAQCAELCWQLRGEAGKR 121
>M75883-1|AAA03557.1| 547|Homo sapiens sterol carrier
protein-X/sterol carrier protein-2 protein.
Length = 547
Score = 34.7 bits (76), Expect = 0.16
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 458 LNVNGGAIAMGHPVGASGARITAHLAHELRRRGLKR 351
+N +GG I+ GHP+GA+G A L +LR KR
Sbjct: 344 INPSGGLISKGHPLGATGLAQCAELCWQLRGEAGKR 379
>AL445183-3|CAH72590.1| 547|Homo sapiens sterol carrier protein 2
protein.
Length = 547
Score = 34.7 bits (76), Expect = 0.16
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -2
Query: 458 LNVNGGAIAMGHPVGASGARITAHLAHELRRRGLKR 351
+N +GG I+ GHP+GA+G A L +LR KR
Sbjct: 344 INPSGGLISKGHPLGATGLAQCAELCWQLRGEAGKR 379
>AK131080-1|BAC85130.1| 563|Homo sapiens FLJ00279 protein protein.
Length = 563
Score = 29.9 bits (64), Expect = 4.6
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = -1
Query: 447 RRG-HRYGTSCWRVWGQDHSSFSS*AQTSWFEERYRLSMHWRRAR 316
RRG R T+CW W + S+ A+ +W R L+ WRR R
Sbjct: 18 RRGCSRSWTTCWWTW-----TTSARARATWRRSRRSLTSSWRRRR 57
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,541,258
Number of Sequences: 237096
Number of extensions: 1045492
Number of successful extensions: 5960
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 5857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5960
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4042952858
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -