Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12m23
(693 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY122075-1|AAM52587.1| 503|Drosophila melanogaster AT17506p pro... 31 1.5
AJ252082-1|CAB64385.1| 979|Drosophila melanogaster BAB-I protei... 31 1.5
AE014296-173|AAS64927.1| 526|Drosophila melanogaster CG9097-PA,... 31 1.5
AE014296-172|AAF47439.2| 977|Drosophila melanogaster CG9097-PB,... 31 1.5
X80468-1|CAA56640.1| 805|Drosophila melanogaster serine threoni... 29 7.9
X55759-1|CAA39285.1| 297|Drosophila melanogaster serine/threoni... 29 7.9
L34782-1|AAA28552.1| 805|Drosophila melanogaster serine/threoni... 29 7.9
BT023514-1|AAY84914.1| 827|Drosophila melanogaster LD03657p pro... 29 7.9
BT010228-1|AAQ23546.1| 1008|Drosophila melanogaster RE64686p pro... 29 7.9
AE014298-2752|AAF48871.1| 805|Drosophila melanogaster CG6551-PA... 29 7.9
AE014298-1226|AAF46410.2| 1008|Drosophila melanogaster CG1994-PA... 29 7.9
>AY122075-1|AAM52587.1| 503|Drosophila melanogaster AT17506p
protein.
Length = 503
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -2
Query: 659 TSLGNGVYLSPELSATIPHSHGGFGWGASCIGG 561
+ LG G P L PH HGG G G +GG
Sbjct: 424 SGLGPGPSAEPRLPPPPPHHHGGGGVGGGGVGG 456
>AJ252082-1|CAB64385.1| 979|Drosophila melanogaster BAB-I protein
protein.
Length = 979
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -2
Query: 659 TSLGNGVYLSPELSATIPHSHGGFGWGASCIGG 561
+ LG G P L PH HGG G G +GG
Sbjct: 447 SGLGPGPSAEPRLPPPPPHHHGGGGVGGGGVGG 479
>AE014296-173|AAS64927.1| 526|Drosophila melanogaster CG9097-PA,
isoform A protein.
Length = 526
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -2
Query: 659 TSLGNGVYLSPELSATIPHSHGGFGWGASCIGG 561
+ LG G P L PH HGG G G +GG
Sbjct: 447 SGLGPGPSAEPRLPPPPPHHHGGGGVGGGGVGG 479
>AE014296-172|AAF47439.2| 977|Drosophila melanogaster CG9097-PB,
isoform B protein.
Length = 977
Score = 31.1 bits (67), Expect = 1.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = -2
Query: 659 TSLGNGVYLSPELSATIPHSHGGFGWGASCIGG 561
+ LG G P L PH HGG G G +GG
Sbjct: 447 SGLGPGPSAEPRLPPPPPHHHGGGGVGGGGVGG 479
>X80468-1|CAA56640.1| 805|Drosophila melanogaster serine threonine
kinase protein.
Length = 805
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 650 GNGVYLSPELSATIPHSHGGFGWGASCI 567
G +Y++PEL A P+ H W CI
Sbjct: 162 GTPLYMAPELLADEPYDHHADMWSLGCI 189
>X55759-1|CAA39285.1| 297|Drosophila melanogaster serine/threonine
protein kinase protein.
Length = 297
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 650 GNGVYLSPELSATIPHSHGGFGWGASCI 567
G +Y++PEL A P+ H W CI
Sbjct: 186 GTPLYMAPELLADEPYDHHADMWSLGCI 213
>L34782-1|AAA28552.1| 805|Drosophila melanogaster serine/threonine
kinase protein.
Length = 805
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 650 GNGVYLSPELSATIPHSHGGFGWGASCI 567
G +Y++PEL A P+ H W CI
Sbjct: 162 GTPLYMAPELLADEPYDHHADMWSLGCI 189
>BT023514-1|AAY84914.1| 827|Drosophila melanogaster LD03657p
protein.
Length = 827
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 650 GNGVYLSPELSATIPHSHGGFGWGASCI 567
G +Y++PEL A P+ H W CI
Sbjct: 184 GTPLYMAPELLAEQPYDHHADMWSLGCI 211
>BT010228-1|AAQ23546.1| 1008|Drosophila melanogaster RE64686p
protein.
Length = 1008
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 512 SLRVHQPLRTRLHKISDLRYNSPPIRSLHDCE 607
S+ VH+ RT H+ R+N I SL DC+
Sbjct: 161 SMDVHKRFRTEAHQTVTCRFNERLILSLADCK 192
>AE014298-2752|AAF48871.1| 805|Drosophila melanogaster CG6551-PA
protein.
Length = 805
Score = 28.7 bits (61), Expect = 7.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -2
Query: 650 GNGVYLSPELSATIPHSHGGFGWGASCI 567
G +Y++PEL A P+ H W CI
Sbjct: 162 GTPLYMAPELLAEQPYDHHADMWSLGCI 189
>AE014298-1226|AAF46410.2| 1008|Drosophila melanogaster CG1994-PA
protein.
Length = 1008
Score = 28.7 bits (61), Expect = 7.9
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +2
Query: 512 SLRVHQPLRTRLHKISDLRYNSPPIRSLHDCE 607
S+ VH+ RT H+ R+N I SL DC+
Sbjct: 161 SMDVHKRFRTEAHQTVTCRFNERLILSLADCK 192
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,605,567
Number of Sequences: 53049
Number of extensions: 720091
Number of successful extensions: 1907
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1907
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3026039247
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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