Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12m14
(751 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC051812-1|AAH51812.1| 127|Homo sapiens LIMD2 protein protein. 46 2e-04
BC004400-1|AAH04400.1| 127|Homo sapiens LIM domain containing 2... 46 2e-04
AK097519-1|BAC05086.1| 519|Homo sapiens protein ( Homo sapiens ... 46 2e-04
AK092301-1|BAC03855.1| 127|Homo sapiens protein ( Homo sapiens ... 46 2e-04
BC110815-1|AAI10816.1| 759|Homo sapiens LIM domain and actin bi... 41 0.005
BC001247-1|AAH01247.2| 660|Homo sapiens LIMA1 protein protein. 41 0.005
AK222971-1|BAD96691.1| 759|Homo sapiens epithelial protein lost... 41 0.005
AK023649-1|BAB14625.1| 457|Homo sapiens protein ( Homo sapiens ... 41 0.005
AK000372-1|BAA91120.1| 704|Homo sapiens protein ( Homo sapiens ... 41 0.005
AK000335-1|BAA91092.1| 599|Homo sapiens protein ( Homo sapiens ... 41 0.005
AK000057-1|BAA90914.1| 456|Homo sapiens protein ( Homo sapiens ... 41 0.005
AF198455-1|AAF23756.1| 600|Homo sapiens epithelial protein lost... 41 0.005
AF198454-1|AAF23755.1| 759|Homo sapiens epithelial protein lost... 41 0.005
AF157325-1|AAF67491.1| 457|Homo sapiens sterol regulatory eleme... 41 0.005
AB209512-1|BAD92749.1| 769|Homo sapiens epithelial protein lost... 41 0.005
CR456437-1|CAG30323.1| 863|Homo sapiens dJ1014D13.2 protein. 40 0.007
AL022311-1|CAI18864.1| 863|Homo sapiens protein ( Human DNA seq... 40 0.007
AJ496196-1|CAD42713.1| 863|Homo sapiens molecule interacting wi... 40 0.007
AB051455-1|BAB33338.1| 791|Homo sapiens KIAA1668 protein protein. 40 0.007
AY555744-1|AAS66890.1| 166|Homo sapiens LIM-only isoform D prot... 36 0.21
AY555743-1|AAS66889.1| 217|Homo sapiens LIM-only isoform C prot... 36 0.21
AY555742-1|AAS66888.1| 205|Homo sapiens LIM-only isoform B prot... 36 0.21
AY555741-1|AAS66887.1| 204|Homo sapiens LIM-only isoform A prot... 36 0.21
AL583834-11|CAM20552.1| 217|Homo sapiens protein ( amily 22 (or... 36 0.21
AL583834-10|CAI14469.1| 204|Homo sapiens protein ( amily 22 (or... 36 0.21
AL450998-6|CAH70854.1| 373|Homo sapiens filamin binding LIM pro... 36 0.21
U60116-1|AAC04466.2| 280|Homo sapiens skeletal muscle LIM-prote... 35 0.36
M76378-1|AAA58431.1| 193|Homo sapiens cysteine-rich protein pro... 34 0.47
M33146-1|AAA35720.1| 193|Homo sapiens protein ( Human cysteine-... 34 0.47
BT019520-1|AAV38327.1| 193|Homo sapiens cysteine and glycine-ri... 34 0.47
BC101470-1|AAI01471.1| 1478|Homo sapiens FYVE and coiled-coil do... 34 0.47
BC101468-1|AAI01469.1| 1478|Homo sapiens FYVE and coiled-coil do... 34 0.47
BC032493-1|AAH32493.1| 193|Homo sapiens cysteine and glycine-ri... 34 0.47
BC004265-1|AAH04265.1| 168|Homo sapiens Similar to cysteine and... 34 0.47
AL833308-1|CAD89924.1| 878|Homo sapiens hypothetical protein pr... 34 0.47
AL133035-1|CAB61365.1| 200|Homo sapiens hypothetical protein pr... 34 0.47
AK131508-1|BAD18652.1| 191|Homo sapiens protein ( Homo sapiens ... 34 0.47
AJ292348-1|CAC33883.1| 1478|Homo sapiens FYVE and coiled-coil do... 34 0.47
CR457425-1|CAG33706.1| 280|Homo sapiens FHL3 protein. 34 0.63
BT007052-1|AAP35701.1| 280|Homo sapiens four and a half LIM dom... 34 0.63
BC019895-1|AAH19895.1| 373|Homo sapiens FBLIM1 protein protein. 34 0.63
BC011697-1|AAH11697.1| 280|Homo sapiens four and a half LIM dom... 34 0.63
BC001351-1|AAH01351.1| 280|Homo sapiens four and a half LIM dom... 34 0.63
AY180161-1|AAO49012.1| 373|Homo sapiens migfilin protein. 34 0.63
AL603790-6|CAH69931.1| 280|Homo sapiens four and a half LIM dom... 34 0.63
AF459643-1|AAO15549.1| 374|Homo sapiens filamin-binding LIM pro... 34 0.63
AF133732-1|AAF61376.1| 280|Homo sapiens LIM-only protein FHL3 p... 34 0.63
AL450998-5|CAH70853.1| 276|Homo sapiens filamin binding LIM pro... 33 0.83
U63721-3|AAC13886.1| 633|Homo sapiens LIM-kinase protein. 32 1.9
U63721-2|AAC13885.1| 647|Homo sapiens LIM-kinase protein. 32 1.9
U62293-2|AAB17546.1| 633|Homo sapiens alternatively spliced LIM... 32 1.9
U62293-1|AAB17545.1| 647|Homo sapiens LIM-kinase1 protein. 32 1.9
U24169-1|AAC50391.1| 312|Homo sapiens JTV-1 protein. 32 1.9
D26309-1|BAA05371.1| 647|Homo sapiens LIM kinase protein. 32 1.9
BC013630-1|AAH13630.1| 320|Homo sapiens JTV1 gene protein. 32 1.9
BC010156-1|AAH10156.1| 320|Homo sapiens JTV1 gene protein. 32 1.9
BC002853-1|AAH02853.1| 320|Homo sapiens JTV1 gene protein. 32 1.9
AF134379-1|AAD25742.1| 305|Homo sapiens LIM domain kinase 1 spl... 32 1.9
AC005995-2|AAS00389.1| 320|Homo sapiens unknown protein. 32 1.9
AB209560-1|BAD92797.1| 1011|Homo sapiens polymerase (DNA directe... 32 1.9
AL138781-3|CAI16879.1| 397|Homo sapiens LIM homeobox 3 protein. 32 2.5
AK027444-1|BAB55115.1| 276|Homo sapiens protein ( Homo sapiens ... 32 2.5
AF367089-1|AAL26314.1| 397|Homo sapiens LIM homeobox protein 3 ... 32 2.5
AF156888-1|AAF36808.1| 397|Homo sapiens LIM homeobox protein 3 ... 32 2.5
U90654-1|AAB86592.1| 341|Homo sapiens zinc-finger domain-contai... 31 4.4
BC103938-1|AAI03939.1| 362|Homo sapiens LIM homeobox 6 protein. 31 4.4
BC103937-1|AAI03938.1| 363|Homo sapiens LIM homeobox 6 protein. 31 4.4
BC103936-1|AAI03937.1| 348|Homo sapiens LIM homeobox 6 protein. 31 4.4
AL359392-2|CAI40209.1| 1349|Homo sapiens LIM domain 7 protein. 31 4.4
AL162424-5|CAO03566.1| 377|Homo sapiens LIM homeobox 6 protein. 31 4.4
AL162424-4|CAO03565.1| 392|Homo sapiens LIM homeobox 6 protein. 31 4.4
AL162424-3|CAI14704.1| 348|Homo sapiens LIM homeobox 6 protein. 31 4.4
AL162424-2|CAI14703.1| 363|Homo sapiens LIM homeobox 6 protein. 31 4.4
AL137782-3|CAI40007.1| 1349|Homo sapiens LIM domain 7 protein. 31 4.4
AL137244-5|CAI12422.1| 1349|Homo sapiens LIM domain 7 protein. 31 4.4
AL137121-2|CAI39480.1| 1349|Homo sapiens LIM domain 7 protein. 31 4.4
AF330045-1|AAL37480.1| 1349|Homo sapiens LIM domain only 7 protein. 31 4.4
AF144237-1|AAD33924.1| 797|Homo sapiens LOMP protein protein. 31 4.4
AF092557-2|AAC96299.1| 120|Homo sapiens LIM domain only 7 protein. 31 4.4
AB031042-1|BAA83423.1| 348|Homo sapiens LIM-homeodomain (LHX) p... 31 4.4
AB031041-1|BAA83422.1| 363|Homo sapiens LIM-homeodomain (LHX) p... 31 4.4
BC014501-1|AAH14501.1| 172|Homo sapiens FHL3 protein protein. 30 7.7
>BC051812-1|AAH51812.1| 127|Homo sapiens LIMD2 protein protein.
Length = 127
Score = 45.6 bits (103), Expect = 2e-04
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -1
Query: 739 GDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNI 560
G + SKS + K + C+ C + + ++ DK FH+ C C CHT S
Sbjct: 20 GSSTVQRSKSFSLRAQVKET-CAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGS 78
Query: 559 HIC-YGQVFCEPCFQHHVLHRHKDNPNEFF 473
+ +G+ +C+P FQ L + K N +E F
Sbjct: 79 YAALHGEFYCKPHFQQ--LFKSKGNYDEGF 106
>BC004400-1|AAH04400.1| 127|Homo sapiens LIM domain containing 2
protein.
Length = 127
Score = 45.6 bits (103), Expect = 2e-04
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -1
Query: 739 GDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNI 560
G + SKS + K + C+ C + + ++ DK FH+ C C CHT S
Sbjct: 20 GSSTVQRSKSFSLRAQVKET-CAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGS 78
Query: 559 HIC-YGQVFCEPCFQHHVLHRHKDNPNEFF 473
+ +G+ +C+P FQ L + K N +E F
Sbjct: 79 YAALHGEFYCKPHFQQ--LFKSKGNYDEGF 106
>AK097519-1|BAC05086.1| 519|Homo sapiens protein ( Homo sapiens
cDNA FLJ40200 fis, clone TESTI2020071, weakly similar to
Mus musculus epithelial protein lost in neoplasm-a
(Eplin) mRNA. ).
Length = 519
Score = 45.6 bits (103), Expect = 2e-04
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Frame = -1
Query: 685 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPS-SNIHICYGQVFCEPCFQHHV 509
+ +C C + + + DKQ FH C +C+ C++ S N +GQ++C+P F+
Sbjct: 399 KEICILCQKTVYPMECLVADKQNFHKSCFRCHHCNSKLSLGNYASLHGQIYCKPHFKQ-- 456
Query: 508 LHRHKDNPNEFF 473
L + K N +E F
Sbjct: 457 LFKSKGNYDEGF 468
>AK092301-1|BAC03855.1| 127|Homo sapiens protein ( Homo sapiens
cDNA FLJ34982 fis, clone OCBBF2001186, moderately
similar to Mus musculus epithelial protein lost in
neoplasm-a (Eplin) mRNA. ).
Length = 127
Score = 45.6 bits (103), Expect = 2e-04
Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Frame = -1
Query: 739 GDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNI 560
G + SKS + K + C+ C + + ++ DK FH+ C C CHT S
Sbjct: 20 GSSTVQRSKSFSLRAQVKET-CAACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGS 78
Query: 559 HIC-YGQVFCEPCFQHHVLHRHKDNPNEFF 473
+ +G+ +C+P FQ L + K N +E F
Sbjct: 79 YAALHGEFYCKPHFQQ--LFKSKGNYDEGF 106
>BC110815-1|AAI10816.1| 759|Homo sapiens LIM domain and actin
binding 1 protein.
Length = 759
Score = 40.7 bits (91), Expect = 0.005
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 685 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQHHV 509
R C C + + ++ ++Q FH C +C +C+ S + +G+++C+P F
Sbjct: 387 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQ-- 444
Query: 508 LHRHKDNPNEFF 473
L + K N +E F
Sbjct: 445 LFKSKGNYDEGF 456
>BC001247-1|AAH01247.2| 660|Homo sapiens LIMA1 protein protein.
Length = 660
Score = 40.7 bits (91), Expect = 0.005
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 685 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQHHV 509
R C C + + ++ ++Q FH C +C +C+ S + +G+++C+P F
Sbjct: 288 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQ-- 345
Query: 508 LHRHKDNPNEFF 473
L + K N +E F
Sbjct: 346 LFKSKGNYDEGF 357
>AK222971-1|BAD96691.1| 759|Homo sapiens epithelial protein lost in
neoplasm beta variant protein.
Length = 759
Score = 40.7 bits (91), Expect = 0.005
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 685 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQHHV 509
R C C + + ++ ++Q FH C +C +C+ S + +G+++C+P F
Sbjct: 387 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQ-- 444
Query: 508 LHRHKDNPNEFF 473
L + K N +E F
Sbjct: 445 LFKSKGNYDEGF 456
>AK023649-1|BAB14625.1| 457|Homo sapiens protein ( Homo sapiens
cDNA FLJ13587 fis, clone PLACE1009246, weakly similar to
POLLEN SPECIFIC PROTEIN SF3. ).
Length = 457
Score = 40.7 bits (91), Expect = 0.005
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 685 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQHHV 509
R C C + + ++ ++Q FH C +C +C+ S + +G+++C+P F
Sbjct: 85 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQ-- 142
Query: 508 LHRHKDNPNEFF 473
L + K N +E F
Sbjct: 143 LFKSKGNYDEGF 154
>AK000372-1|BAA91120.1| 704|Homo sapiens protein ( Homo sapiens
cDNA FLJ20365 fis, clone HEP17877. ).
Length = 704
Score = 40.7 bits (91), Expect = 0.005
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 685 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQHHV 509
R C C + + ++ ++Q FH C +C +C+ S + +G+++C+P F
Sbjct: 387 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQ-- 444
Query: 508 LHRHKDNPNEFF 473
L + K N +E F
Sbjct: 445 LFKSKGNYDEGF 456
>AK000335-1|BAA91092.1| 599|Homo sapiens protein ( Homo sapiens
cDNA FLJ20328 fis, clone HEP10039. ).
Length = 599
Score = 40.7 bits (91), Expect = 0.005
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 685 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQHHV 509
R C C + + ++ ++Q FH C +C +C+ S + +G+++C+P F
Sbjct: 227 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQ-- 284
Query: 508 LHRHKDNPNEFF 473
L + K N +E F
Sbjct: 285 LFKSKGNYDEGF 296
>AK000057-1|BAA90914.1| 456|Homo sapiens protein ( Homo sapiens
cDNA FLJ20050 fis, clone COL00688. ).
Length = 456
Score = 40.7 bits (91), Expect = 0.005
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 685 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQHHV 509
R C C + + ++ ++Q FH C +C +C+ S + +G+++C+P F
Sbjct: 84 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQ-- 141
Query: 508 LHRHKDNPNEFF 473
L + K N +E F
Sbjct: 142 LFKSKGNYDEGF 153
>AF198455-1|AAF23756.1| 600|Homo sapiens epithelial protein lost in
neoplasm alpha protein.
Length = 600
Score = 40.7 bits (91), Expect = 0.005
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 685 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQHHV 509
R C C + + ++ ++Q FH C +C +C+ S + +G+++C+P F
Sbjct: 228 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQ-- 285
Query: 508 LHRHKDNPNEFF 473
L + K N +E F
Sbjct: 286 LFKSKGNYDEGF 297
>AF198454-1|AAF23755.1| 759|Homo sapiens epithelial protein lost in
neoplasm beta protein.
Length = 759
Score = 40.7 bits (91), Expect = 0.005
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 685 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQHHV 509
R C C + + ++ ++Q FH C +C +C+ S + +G+++C+P F
Sbjct: 387 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQ-- 444
Query: 508 LHRHKDNPNEFF 473
L + K N +E F
Sbjct: 445 LFKSKGNYDEGF 456
>AF157325-1|AAF67491.1| 457|Homo sapiens sterol regulatory element
binding protein 3 protein.
Length = 457
Score = 40.7 bits (91), Expect = 0.005
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 685 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQHHV 509
R C C + + ++ ++Q FH C +C +C+ S + +G+++C+P F
Sbjct: 85 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQ-- 142
Query: 508 LHRHKDNPNEFF 473
L + K N +E F
Sbjct: 143 LFKSKGNYDEGF 154
>AB209512-1|BAD92749.1| 769|Homo sapiens epithelial protein lost in
neoplasm beta variant protein.
Length = 769
Score = 40.7 bits (91), Expect = 0.005
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 685 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQHHV 509
R C C + + ++ ++Q FH C +C +C+ S + +G+++C+P F
Sbjct: 397 RETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKLSLGTYASLHGRIYCKPHFNQ-- 454
Query: 508 LHRHKDNPNEFF 473
L + K N +E F
Sbjct: 455 LFKSKGNYDEGF 466
>CR456437-1|CAG30323.1| 863|Homo sapiens dJ1014D13.2 protein.
Length = 863
Score = 40.3 bits (90), Expect = 0.007
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 748 VRRGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC 584
V +G+ + S SE G T S C+ C Q ++ + D + +H HC +C C
Sbjct: 140 VAQGEELSSGSLSEQGTGQTPSSTCAACQQHVHLVQRYLADGRLYHRHCFRCRRC 194
>AL022311-1|CAI18864.1| 863|Homo sapiens protein ( Human DNA
sequence from clone RP5-1014D13 on chromosome
22q13.1-13.2. ).
Length = 863
Score = 40.3 bits (90), Expect = 0.007
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 748 VRRGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC 584
V +G+ + S SE G T S C+ C Q ++ + D + +H HC +C C
Sbjct: 140 VAQGEELSSGSLSEQGTGQTPSSTCAACQQHVHLVQRYLADGRLYHRHCFRCRRC 194
>AJ496196-1|CAD42713.1| 863|Homo sapiens molecule interacting with
Rab13 protein.
Length = 863
Score = 40.3 bits (90), Expect = 0.007
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 748 VRRGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC 584
V +G+ + S SE G T S C+ C Q ++ + D + +H HC +C C
Sbjct: 140 VAQGEELSSGSLSEQGTGQTPSSTCAACQQHVHLVQRYLADGRLYHRHCFRCRRC 194
>AB051455-1|BAB33338.1| 791|Homo sapiens KIAA1668 protein protein.
Length = 791
Score = 40.3 bits (90), Expect = 0.007
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = -1
Query: 748 VRRGDNPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC 584
V +G+ + S SE G T S C+ C Q ++ + D + +H HC +C C
Sbjct: 68 VAQGEELSSGSLSEQGTGQTPSSTCAACQQHVHLVQRYLADGRLYHRHCFRCRRC 122
>AY555744-1|AAS66890.1| 166|Homo sapiens LIM-only isoform D
protein.
Length = 166
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 676 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICY-GQVFC-EPCF 521
C RC Q + K+ + +H C KC CH++ S H + G+ +C +PC+
Sbjct: 5 CPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCY 58
>AY555743-1|AAS66889.1| 217|Homo sapiens LIM-only isoform C
protein.
Length = 217
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 676 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICY-GQVFC-EPCF 521
C RC Q + K+ + +H C KC CH++ S H + G+ +C +PC+
Sbjct: 5 CPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCY 58
>AY555742-1|AAS66888.1| 205|Homo sapiens LIM-only isoform B
protein.
Length = 205
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 676 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICY-GQVFC-EPCF 521
C RC Q + K+ + +H C KC CH++ S H + G+ +C +PC+
Sbjct: 5 CPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCY 58
>AY555741-1|AAS66887.1| 204|Homo sapiens LIM-only isoform A
protein.
Length = 204
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 676 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICY-GQVFC-EPCF 521
C RC Q + K+ + +H C KC CH++ S H + G+ +C +PC+
Sbjct: 5 CPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCY 58
>AL583834-11|CAM20552.1| 217|Homo sapiens protein ( amily 22
(organic anion ).).
Length = 217
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 676 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICY-GQVFC-EPCF 521
C RC Q + K+ + +H C KC CH++ S H + G+ +C +PC+
Sbjct: 5 CPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCY 58
>AL583834-10|CAI14469.1| 204|Homo sapiens protein ( amily 22
(organic anion ).).
Length = 204
Score = 35.5 bits (78), Expect = 0.21
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = -1
Query: 676 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICY-GQVFC-EPCF 521
C RC Q + K+ + +H C KC CH++ S H + G+ +C +PC+
Sbjct: 5 CPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCY 58
>AL450998-6|CAH70854.1| 373|Homo sapiens filamin binding LIM
protein 1 protein.
Length = 373
Score = 35.5 bits (78), Expect = 0.21
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = -1
Query: 712 SEASEGNTKRSVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHT-VPSSNIHICYGQV 539
+E E +C+ C + ++ +E K+ +H+ C C C + + + G+
Sbjct: 171 AEPVEKGASTDICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRP 230
Query: 538 FCEPCFQ 518
CEPC+Q
Sbjct: 231 LCEPCYQ 237
>U60116-1|AAC04466.2| 280|Homo sapiens skeletal muscle LIM-protein
FHL3 protein.
Length = 280
Score = 34.7 bits (76), Expect = 0.36
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -1
Query: 682 SVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQHHV 509
S CS C + + + K+E Q +H HC C C S + G +C PC++++
Sbjct: 99 SQCSACGETVMPGSRKLEYGGQTWHEHCFLCIGCEQPLGSRPFVPDKGAHYCVPCYENNF 158
Query: 508 LHR 500
R
Sbjct: 159 APR 161
>M76378-1|AAA58431.1| 193|Homo sapiens cysteine-rich protein
protein.
Length = 193
Score = 34.3 bits (75), Expect = 0.47
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 733 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC-HTVPSSNIH 557
NP AS ++ G+ + C RC Q + K+ +++H C +C C + S+ +
Sbjct: 103 NPNASKFAQKIGGSER---CPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLA 159
Query: 556 ICYGQVFCEPCF 521
G+++C+ C+
Sbjct: 160 DKDGEIYCKGCY 171
>M33146-1|AAA35720.1| 193|Homo sapiens protein ( Human
cysteine-rich peptide mRNA, complete cds. ).
Length = 193
Score = 34.3 bits (75), Expect = 0.47
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 733 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC-HTVPSSNIH 557
NP AS ++ G+ + C RC Q + K+ +++H C +C C + S+ +
Sbjct: 103 NPNASKFAQKIGGSER---CPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLA 159
Query: 556 ICYGQVFCEPCF 521
G+++C+ C+
Sbjct: 160 DKDGEIYCKGCY 171
>BT019520-1|AAV38327.1| 193|Homo sapiens cysteine and glycine-rich
protein 1 protein.
Length = 193
Score = 34.3 bits (75), Expect = 0.47
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 733 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC-HTVPSSNIH 557
NP AS ++ G+ + C RC Q + K+ +++H C +C C + S+ +
Sbjct: 103 NPNASKFAQKIGGSER---CPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLA 159
Query: 556 ICYGQVFCEPCF 521
G+++C+ C+
Sbjct: 160 DKDGEIYCKGCY 171
>BC101470-1|AAI01471.1| 1478|Homo sapiens FYVE and coiled-coil domain
containing 1 protein.
Length = 1478
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 610 SHCAKCY--FCHTVPSSNIHICYGQVFCEPCFQHHVLHRHKDNPNEFFKQCFEQFAD 446
+HC C F V + IC G++FC C ++VL +H + CF++ ++
Sbjct: 1177 NHCLDCKREFSWMVRRHHCRIC-GRIFCYYCCNNYVLSKHGGKKERCCRACFQKLSE 1232
>BC101468-1|AAI01469.1| 1478|Homo sapiens FYVE and coiled-coil domain
containing 1 protein.
Length = 1478
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 610 SHCAKCY--FCHTVPSSNIHICYGQVFCEPCFQHHVLHRHKDNPNEFFKQCFEQFAD 446
+HC C F V + IC G++FC C ++VL +H + CF++ ++
Sbjct: 1177 NHCLDCKREFSWMVRRHHCRIC-GRIFCYYCCNNYVLSKHGGKKERCCRACFQKLSE 1232
>BC032493-1|AAH32493.1| 193|Homo sapiens cysteine and glycine-rich
protein 1 protein.
Length = 193
Score = 34.3 bits (75), Expect = 0.47
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 733 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC-HTVPSSNIH 557
NP AS ++ G+ + C RC Q + K+ +++H C +C C + S+ +
Sbjct: 103 NPNASKFAQKIGGSER---CPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLA 159
Query: 556 ICYGQVFCEPCF 521
G+++C+ C+
Sbjct: 160 DKDGEIYCKGCY 171
>BC004265-1|AAH04265.1| 168|Homo sapiens Similar to cysteine and
glycine-rich protein 1 protein.
Length = 168
Score = 34.3 bits (75), Expect = 0.47
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 733 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC-HTVPSSNIH 557
NP AS ++ G+ + C RC Q + K+ +++H C +C C + S+ +
Sbjct: 78 NPNASKFAQKIGGSER---CPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLA 134
Query: 556 ICYGQVFCEPCF 521
G+++C+ C+
Sbjct: 135 DKDGEIYCKGCY 146
>AL833308-1|CAD89924.1| 878|Homo sapiens hypothetical protein
protein.
Length = 878
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 610 SHCAKCY--FCHTVPSSNIHICYGQVFCEPCFQHHVLHRHKDNPNEFFKQCFEQFAD 446
+HC C F V + IC G++FC C ++VL +H + CF++ ++
Sbjct: 577 NHCLDCKREFSWMVRRHHCRIC-GRIFCYYCCNNYVLSKHGGKKERCCRACFQKLSE 632
>AL133035-1|CAB61365.1| 200|Homo sapiens hypothetical protein
protein.
Length = 200
Score = 34.3 bits (75), Expect = 0.47
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -1
Query: 700 EGNTKRSVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHT-VPSSNIHICYGQVFCEP 527
E +C+ C + ++ +E K+ +H+ C C C + + + G+ CEP
Sbjct: 2 EKGASTDICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEP 61
Query: 526 CFQ 518
C+Q
Sbjct: 62 CYQ 64
>AK131508-1|BAD18652.1| 191|Homo sapiens protein ( Homo sapiens
cDNA FLJ16726 fis, clone UTERU3014791. ).
Length = 191
Score = 34.3 bits (75), Expect = 0.47
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = -1
Query: 733 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC-HTVPSSNIH 557
NP AS ++ G+ + C RC Q + K+ +++H C +C C + S+ +
Sbjct: 101 NPNASKFAQKIGGSER---CPRCSQAVYAAEKVIGAGKSWHKACFRCAKCGKGLESTTLA 157
Query: 556 ICYGQVFCEPCF 521
G+++C+ C+
Sbjct: 158 DKDGEIYCKGCY 169
>AJ292348-1|CAC33883.1| 1478|Homo sapiens FYVE and coiled-coil domain
containing 1 protein.
Length = 1478
Score = 34.3 bits (75), Expect = 0.47
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Frame = -1
Query: 610 SHCAKCY--FCHTVPSSNIHICYGQVFCEPCFQHHVLHRHKDNPNEFFKQCFEQFAD 446
+HC C F V + IC G++FC C ++VL +H + CF++ ++
Sbjct: 1177 NHCLDCKREFSWMVRRHHCRIC-GRIFCYYCCNNYVLSKHGGKKERCCRACFQKLSE 1232
>CR457425-1|CAG33706.1| 280|Homo sapiens FHL3 protein.
Length = 280
Score = 33.9 bits (74), Expect = 0.63
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 682 SVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQH 515
S CS C + + + K+E Q +H HC C C S + G +C PC+++
Sbjct: 99 SQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYEN 156
>BT007052-1|AAP35701.1| 280|Homo sapiens four and a half LIM
domains 3 protein.
Length = 280
Score = 33.9 bits (74), Expect = 0.63
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 682 SVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQH 515
S CS C + + + K+E Q +H HC C C S + G +C PC+++
Sbjct: 99 SQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYEN 156
>BC019895-1|AAH19895.1| 373|Homo sapiens FBLIM1 protein protein.
Length = 373
Score = 33.9 bits (74), Expect = 0.63
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -1
Query: 712 SEASEGNTKRSVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHT-VPSSNIHICYGQV 539
+E E +C+ C + + +E K+ +H+ C C C + + + G+
Sbjct: 171 AEPVEKGASTDICAFCHKTVFPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRP 230
Query: 538 FCEPCFQ 518
CEPC+Q
Sbjct: 231 LCEPCYQ 237
>BC011697-1|AAH11697.1| 280|Homo sapiens four and a half LIM
domains 3 protein.
Length = 280
Score = 33.9 bits (74), Expect = 0.63
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 682 SVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQH 515
S CS C + + + K+E Q +H HC C C S + G +C PC+++
Sbjct: 99 SQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYEN 156
>BC001351-1|AAH01351.1| 280|Homo sapiens four and a half LIM
domains 3 protein.
Length = 280
Score = 33.9 bits (74), Expect = 0.63
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 682 SVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQH 515
S CS C + + + K+E Q +H HC C C S + G +C PC+++
Sbjct: 99 SQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYEN 156
>AY180161-1|AAO49012.1| 373|Homo sapiens migfilin protein.
Length = 373
Score = 33.9 bits (74), Expect = 0.63
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -1
Query: 712 SEASEGNTKRSVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHT-VPSSNIHICYGQV 539
+E E +C+ C + + +E K+ +H+ C C C + + + G+
Sbjct: 171 AEPVEKGASTDICAFCHKTVFPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRP 230
Query: 538 FCEPCFQ 518
CEPC+Q
Sbjct: 231 LCEPCYQ 237
>AL603790-6|CAH69931.1| 280|Homo sapiens four and a half LIM
domains 3 protein.
Length = 280
Score = 33.9 bits (74), Expect = 0.63
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 682 SVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQH 515
S CS C + + + K+E Q +H HC C C S + G +C PC+++
Sbjct: 99 SQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYEN 156
>AF459643-1|AAO15549.1| 374|Homo sapiens filamin-binding LIM
protein-1 protein.
Length = 374
Score = 33.9 bits (74), Expect = 0.63
Identities = 16/67 (23%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
Frame = -1
Query: 712 SEASEGNTKRSVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHT-VPSSNIHICYGQV 539
+E E +C+ C + + +E K+ +H+ C C C + + + G+
Sbjct: 171 AEPVEKGASTDICAFCHKTVFPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRP 230
Query: 538 FCEPCFQ 518
CEPC+Q
Sbjct: 231 LCEPCYQ 237
>AF133732-1|AAF61376.1| 280|Homo sapiens LIM-only protein FHL3
protein.
Length = 280
Score = 33.9 bits (74), Expect = 0.63
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 682 SVCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQH 515
S CS C + + + K+E Q +H HC C C S + G +C PC+++
Sbjct: 99 SQCSACGETVMPGSRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYEN 156
>AL450998-5|CAH70853.1| 276|Homo sapiens filamin binding LIM
protein 1 protein.
Length = 276
Score = 33.5 bits (73), Expect = 0.83
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 679 VCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHT-VPSSNIHICYGQVFCEPCFQ 518
+C+ C + ++ +E K+ +H+ C C C + + + G+ CEPC+Q
Sbjct: 85 ICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQ 140
>U63721-3|AAC13886.1| 633|Homo sapiens LIM-kinase protein.
Length = 633
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -1
Query: 700 EGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCE 530
E ++ VC+ C Q I + ++ +H+ C +C C S + GQ+FC+
Sbjct: 3 EEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCK 59
>U63721-2|AAC13885.1| 647|Homo sapiens LIM-kinase protein.
Length = 647
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -1
Query: 700 EGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCE 530
E ++ VC+ C Q I + ++ +H+ C +C C S + GQ+FC+
Sbjct: 17 EEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCK 73
>U62293-2|AAB17546.1| 633|Homo sapiens alternatively spliced
LIM-kinase1 protein.
Length = 633
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -1
Query: 700 EGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCE 530
E ++ VC+ C Q I + ++ +H+ C +C C S + GQ+FC+
Sbjct: 3 EEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCK 59
>U62293-1|AAB17545.1| 647|Homo sapiens LIM-kinase1 protein.
Length = 647
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -1
Query: 700 EGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCE 530
E ++ VC+ C Q I + ++ +H+ C +C C S + GQ+FC+
Sbjct: 17 EEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCK 73
>U24169-1|AAC50391.1| 312|Homo sapiens JTV-1 protein.
Length = 312
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 171 FSIFSTPHVSIS-TLLDSWTSDVSVRFSKDSSKVESSVLQSM 293
FS+F H +++ TL+DSW + + SSK +++V +SM
Sbjct: 218 FSLFGQKHNAVNATLIDSWVDIAIFQLKEGSSKEKAAVFRSM 259
>D26309-1|BAA05371.1| 647|Homo sapiens LIM kinase protein.
Length = 647
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -1
Query: 700 EGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCE 530
E ++ VC+ C Q I + ++ +H+ C +C C S + GQ+FC+
Sbjct: 17 EEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCK 73
>BC013630-1|AAH13630.1| 320|Homo sapiens JTV1 gene protein.
Length = 320
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 171 FSIFSTPHVSIS-TLLDSWTSDVSVRFSKDSSKVESSVLQSM 293
FS+F H +++ TL+DSW + + SSK +++V +SM
Sbjct: 218 FSLFGQKHNAVNATLIDSWVDIAIFQLKEGSSKEKAAVFRSM 259
>BC010156-1|AAH10156.1| 320|Homo sapiens JTV1 gene protein.
Length = 320
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 171 FSIFSTPHVSIS-TLLDSWTSDVSVRFSKDSSKVESSVLQSM 293
FS+F H +++ TL+DSW + + SSK +++V +SM
Sbjct: 218 FSLFGQKHNAVNATLIDSWVDIAIFQLKEGSSKEKAAVFRSM 259
>BC002853-1|AAH02853.1| 320|Homo sapiens JTV1 gene protein.
Length = 320
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 171 FSIFSTPHVSIS-TLLDSWTSDVSVRFSKDSSKVESSVLQSM 293
FS+F H +++ TL+DSW + + SSK +++V +SM
Sbjct: 218 FSLFGQKHNAVNATLIDSWVDIAIFQLKEGSSKEKAAVFRSM 259
>AF134379-1|AAD25742.1| 305|Homo sapiens LIM domain kinase 1 splice
variant protein.
Length = 305
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/57 (26%), Positives = 27/57 (47%)
Frame = -1
Query: 700 EGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCE 530
E ++ VC+ C Q I + ++ +H+ C +C C S + GQ+FC+
Sbjct: 17 EEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCK 73
>AC005995-2|AAS00389.1| 320|Homo sapiens unknown protein.
Length = 320
Score = 32.3 bits (70), Expect = 1.9
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 171 FSIFSTPHVSIS-TLLDSWTSDVSVRFSKDSSKVESSVLQSM 293
FS+F H +++ TL+DSW + + SSK +++V +SM
Sbjct: 218 FSLFGQKHNAVNATLIDSWVDIAIFQLKEGSSKEKAAVFRSM 259
>AB209560-1|BAD92797.1| 1011|Homo sapiens polymerase (DNA directed),
delta 1, catalytic subunit 125kDa variant protein.
Length = 1011
Score = 32.3 bits (70), Expect = 1.9
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = +1
Query: 520 GSKARRRL-DHSRCGCW-TMEPCGKNSTWHSDYGRPAC 627
G +A L + +RC CW T P +++TW S + P+C
Sbjct: 898 GKQAHVELAERTRCSCWSTACPLTRSTTWSSSWPSPSC 935
>AL138781-3|CAI16879.1| 397|Homo sapiens LIM homeobox 3 protein.
Length = 397
Score = 31.9 bits (69), Expect = 2.5
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = -1
Query: 730 PGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHIC 551
PGA++ G + +C+ C Q I + ++ + +HS C KC CHT +
Sbjct: 14 PGAAAVCTLG-GTREIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSR 72
Query: 550 YGQVFCEPCF 521
V+C+ F
Sbjct: 73 GESVYCKDDF 82
>AK027444-1|BAB55115.1| 276|Homo sapiens protein ( Homo sapiens
cDNA FLJ14538 fis, clone NT2RM2001324, weakly similar to
ZYXIN. ).
Length = 276
Score = 31.9 bits (69), Expect = 2.5
Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -1
Query: 679 VCSRCLQMINENN-KIEIDKQAFHSHCAKCYFCHT-VPSSNIHICYGQVFCEPCFQ 518
+C+ C + + +E K+ +H+ C C C + + + G+ CEPC+Q
Sbjct: 85 ICAFCHKTVFPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCYQ 140
>AF367089-1|AAL26314.1| 397|Homo sapiens LIM homeobox protein 3
protein.
Length = 397
Score = 31.9 bits (69), Expect = 2.5
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = -1
Query: 730 PGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHIC 551
PGA++ G + +C+ C Q I + ++ + +HS C KC CHT +
Sbjct: 14 PGAAAVCTLG-GTREIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSR 72
Query: 550 YGQVFCEPCF 521
V+C+ F
Sbjct: 73 GESVYCKDDF 82
>AF156888-1|AAF36808.1| 397|Homo sapiens LIM homeobox protein 3
isoform a protein.
Length = 397
Score = 31.9 bits (69), Expect = 2.5
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = -1
Query: 730 PGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHIC 551
PGA++ G + +C+ C Q I + ++ + +HS C KC CHT +
Sbjct: 14 PGAAAVCTLG-GTREIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSR 72
Query: 550 YGQVFCEPCF 521
V+C+ F
Sbjct: 73 GESVYCKDDF 82
>U90654-1|AAB86592.1| 341|Homo sapiens zinc-finger
domain-containing protein protein.
Length = 341
Score = 31.1 bits (67), Expect = 4.4
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
Frame = -1
Query: 742 RGDNPGASSKSEASEGNTK--RSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCH-- 581
R +P AS + + +CS C ++ + + I+ +H HC KC C
Sbjct: 248 RSHSPSASQSGSQLRNRSVSGKRICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECD 307
Query: 580 ---TVPSSNIHICYGQVFCEPCF 521
+ + + I Q++C C+
Sbjct: 308 LGGSSSGAEVRIRNHQLYCNDCY 330
>BC103938-1|AAI03939.1| 362|Homo sapiens LIM homeobox 6 protein.
Length = 362
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 733 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 560
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 54 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 110
Query: 559 HICYGQVFCE 530
+I ++FC+
Sbjct: 111 YIKNKEIFCK 120
>BC103937-1|AAI03938.1| 363|Homo sapiens LIM homeobox 6 protein.
Length = 363
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 733 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 560
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 54 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 110
Query: 559 HICYGQVFCE 530
+I ++FC+
Sbjct: 111 YIKNKEIFCK 120
>BC103936-1|AAI03937.1| 348|Homo sapiens LIM homeobox 6 protein.
Length = 348
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 733 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 560
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 54 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 110
Query: 559 HICYGQVFCE 530
+I ++FC+
Sbjct: 111 YIKNKEIFCK 120
>AL359392-2|CAI40209.1| 1349|Homo sapiens LIM domain 7 protein.
Length = 1349
Score = 31.1 bits (67), Expect = 4.4
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
Frame = -1
Query: 742 RGDNPGASSKSEASEGNTK--RSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCH-- 581
R +P AS + + +CS C ++ + + I+ +H HC KC C
Sbjct: 1256 RSHSPSASQSGSQLRNRSVSGKRICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECD 1315
Query: 580 ---TVPSSNIHICYGQVFCEPCF 521
+ + + I Q++C C+
Sbjct: 1316 LGGSSSGAEVRIRNHQLYCNDCY 1338
>AL162424-5|CAO03566.1| 377|Homo sapiens LIM homeobox 6 protein.
Length = 377
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 733 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 560
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 83 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 139
Query: 559 HICYGQVFCE 530
+I ++FC+
Sbjct: 140 YIKNKEIFCK 149
>AL162424-4|CAO03565.1| 392|Homo sapiens LIM homeobox 6 protein.
Length = 392
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 733 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 560
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 83 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 139
Query: 559 HICYGQVFCE 530
+I ++FC+
Sbjct: 140 YIKNKEIFCK 149
>AL162424-3|CAI14704.1| 348|Homo sapiens LIM homeobox 6 protein.
Length = 348
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 733 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 560
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 54 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 110
Query: 559 HICYGQVFCE 530
+I ++FC+
Sbjct: 111 YIKNKEIFCK 120
>AL162424-2|CAI14703.1| 363|Homo sapiens LIM homeobox 6 protein.
Length = 363
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 733 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 560
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 54 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 110
Query: 559 HICYGQVFCE 530
+I ++FC+
Sbjct: 111 YIKNKEIFCK 120
>AL137782-3|CAI40007.1| 1349|Homo sapiens LIM domain 7 protein.
Length = 1349
Score = 31.1 bits (67), Expect = 4.4
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
Frame = -1
Query: 742 RGDNPGASSKSEASEGNTK--RSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCH-- 581
R +P AS + + +CS C ++ + + I+ +H HC KC C
Sbjct: 1256 RSHSPSASQSGSQLRNRSVSGKRICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECD 1315
Query: 580 ---TVPSSNIHICYGQVFCEPCF 521
+ + + I Q++C C+
Sbjct: 1316 LGGSSSGAEVRIRNHQLYCNDCY 1338
>AL137244-5|CAI12422.1| 1349|Homo sapiens LIM domain 7 protein.
Length = 1349
Score = 31.1 bits (67), Expect = 4.4
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
Frame = -1
Query: 742 RGDNPGASSKSEASEGNTK--RSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCH-- 581
R +P AS + + +CS C ++ + + I+ +H HC KC C
Sbjct: 1256 RSHSPSASQSGSQLRNRSVSGKRICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECD 1315
Query: 580 ---TVPSSNIHICYGQVFCEPCF 521
+ + + I Q++C C+
Sbjct: 1316 LGGSSSGAEVRIRNHQLYCNDCY 1338
>AL137121-2|CAI39480.1| 1349|Homo sapiens LIM domain 7 protein.
Length = 1349
Score = 31.1 bits (67), Expect = 4.4
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
Frame = -1
Query: 742 RGDNPGASSKSEASEGNTK--RSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCH-- 581
R +P AS + + +CS C ++ + + I+ +H HC KC C
Sbjct: 1256 RSHSPSASQSGSQLRNRSVSGKRICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECD 1315
Query: 580 ---TVPSSNIHICYGQVFCEPCF 521
+ + + I Q++C C+
Sbjct: 1316 LGGSSSGAEVRIRNHQLYCNDCY 1338
>AF330045-1|AAL37480.1| 1349|Homo sapiens LIM domain only 7 protein.
Length = 1349
Score = 31.1 bits (67), Expect = 4.4
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
Frame = -1
Query: 742 RGDNPGASSKSEASEGNTK--RSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCH-- 581
R +P AS + + +CS C ++ + + I+ +H HC KC C
Sbjct: 1256 RSHSPSASQSGSQLRNRSVSGKRICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECD 1315
Query: 580 ---TVPSSNIHICYGQVFCEPCF 521
+ + + I Q++C C+
Sbjct: 1316 LGGSSSGAEVRIRNHQLYCNDCY 1338
>AF144237-1|AAD33924.1| 797|Homo sapiens LOMP protein protein.
Length = 797
Score = 31.1 bits (67), Expect = 4.4
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
Frame = -1
Query: 742 RGDNPGASSKSEASEGNTK--RSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCH-- 581
R +P AS + + +CS C ++ + + I+ +H HC KC C
Sbjct: 704 RSHSPSASQSGSQLRNRSVSGKRICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECD 763
Query: 580 ---TVPSSNIHICYGQVFCEPCF 521
+ + + I Q++C C+
Sbjct: 764 LGGSSSGAEVRIRNHQLYCNDCY 786
>AF092557-2|AAC96299.1| 120|Homo sapiens LIM domain only 7 protein.
Length = 120
Score = 31.1 bits (67), Expect = 4.4
Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
Frame = -1
Query: 742 RGDNPGASSKSEASEGNTK--RSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCH-- 581
R +P AS + + +CS C ++ + + I+ +H HC KC C
Sbjct: 27 RSHSPSASQSGSQLRNRSVSGKRICSYCNNILGKGAAMIIESLGLCYHLHCFKCVACECD 86
Query: 580 ---TVPSSNIHICYGQVFCEPCF 521
+ + + I Q++C C+
Sbjct: 87 LGGSSSGAEVRIRNHQLYCNDCY 109
>AB031042-1|BAA83423.1| 348|Homo sapiens LIM-homeodomain (LHX)
protein 6.1b protein.
Length = 348
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 733 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 560
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 54 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 110
Query: 559 HICYGQVFCE 530
+I ++FC+
Sbjct: 111 YIKNKEIFCK 120
>AB031041-1|BAA83422.1| 363|Homo sapiens LIM-homeodomain (LHX)
protein 6.1a protein.
Length = 363
Score = 31.1 bits (67), Expect = 4.4
Identities = 16/70 (22%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 733 NPGASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTV--PSSNI 560
+P +++ S S G +++CS C I + ++++ +H C +C C T ++
Sbjct: 54 SPPSAASSVPSAG---KNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRTSLRQQNSC 110
Query: 559 HICYGQVFCE 530
+I ++FC+
Sbjct: 111 YIKNKEIFCK 120
>BC014501-1|AAH14501.1| 172|Homo sapiens FHL3 protein protein.
Length = 172
Score = 30.3 bits (65), Expect = 7.7
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -1
Query: 646 NNKIEIDKQAFHSHCAKCYFCHTVPSSNIHI-CYGQVFCEPCFQH 515
+ K+E Q +H HC C C S + G +C PC+++
Sbjct: 4 SRKLEYGGQTWHEHCFLCSGCEQPLGSRSFVPDKGAHYCVPCYEN 48
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,728,792
Number of Sequences: 237096
Number of extensions: 2764504
Number of successful extensions: 7567
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 7010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7563
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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