Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12m14
(751 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical pr... 38 0.008
L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein pr... 38 0.008
Z69659-1|CAA93483.1| 329|Caenorhabditis elegans Hypothetical pr... 36 0.023
U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated p... 35 0.071
AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein. 35 0.071
U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeo... 34 0.094
AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox ... 34 0.094
Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical pr... 33 0.16
M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein ( C.ele... 33 0.16
AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical... 33 0.16
U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain fami... 33 0.22
Z47811-3|CAA87787.2| 723|Caenorhabditis elegans Hypothetical pr... 31 0.66
AF489839-1|AAN09795.1| 723|Caenorhabditis elegans lim and trans... 31 0.66
AF000266-9|AAC71169.1| 566|Caenorhabditis elegans Hypothetical ... 31 0.66
U41550-4|AAP31434.3| 412|Caenorhabditis elegans Hypothetical pr... 31 0.87
AL022288-5|CAA18366.1| 301|Caenorhabditis elegans Hypothetical ... 31 0.87
AL022288-1|CAA18362.1| 301|Caenorhabditis elegans Hypothetical ... 31 0.87
Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical ... 31 1.2
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 30 1.5
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 30 1.5
AF125445-1|AAD12803.2| 550|Caenorhabditis elegans Hypothetical ... 30 1.5
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 30 2.0
Z71261-2|CAA95805.1| 813|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 29 2.7
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 29 2.7
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 29 2.7
Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical p... 29 2.7
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 29 2.7
U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily ass... 29 2.7
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 29 2.7
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 29 2.7
AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical ... 29 3.5
AF016683-8|AAM97998.1| 480|Caenorhabditis elegans Hypothetical ... 29 3.5
Z78417-10|CAB01688.2| 745|Caenorhabditis elegans Hypothetical p... 29 4.7
AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical ... 29 4.7
Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical p... 28 6.2
Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical p... 28 6.2
Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical p... 28 6.2
Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical p... 28 6.2
U20861-6|AAA62294.1| 256|Caenorhabditis elegans Temporarily ass... 28 6.2
AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical ... 28 6.2
AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical ... 28 6.2
AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical ... 28 6.2
Z81456-2|CAB03811.2| 309|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z72504-6|CAA96604.2| 906|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical pr... 28 8.1
U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of pr... 28 8.1
U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein. 28 8.1
U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of fu... 28 8.1
U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of fu... 28 8.1
U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion... 28 8.1
U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion... 28 8.1
U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin iso... 28 8.1
AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger p... 28 8.1
AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain fa... 28 8.1
AC103567-8|AAL35729.1| 305|Caenorhabditis elegans Hypothetical ... 28 8.1
>Z81054-4|CAB02885.3| 321|Caenorhabditis elegans Hypothetical
protein F01D4.6a protein.
Length = 321
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -1
Query: 676 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFC-EPCFQHHVLHR 500
C+ C + I + +D +++H +C KC C + + G+++C + ++ H +HR
Sbjct: 29 CNCCNEQIYDRYIYRMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHYYKDHSIHR 88
>L02877-1|AAA50614.1| 321|Caenorhabditis elegans homeoprotein
protein.
Length = 321
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/60 (23%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = -1
Query: 676 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFC-EPCFQHHVLHR 500
C+ C + I + +D +++H +C KC C + + G+++C + ++ H +HR
Sbjct: 29 CNCCNEQIYDRYIYRMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHYYKDHSIHR 88
>Z69659-1|CAA93483.1| 329|Caenorhabditis elegans Hypothetical
protein F07C6.1 protein.
Length = 329
Score = 36.3 bits (80), Expect = 0.023
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = -1
Query: 676 CSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCEPCF 521
C++C Q ++ ++ + + +H++ KC C V S+ +FC CF
Sbjct: 143 CNKCKQHVDNSDLLTYQENPYHAYHFKCTTCKKVLESDARTIKDDLFCPRCF 194
>U41021-4|AAA82334.1| 348|Caenorhabditis elegans Uncoordinated
protein 97 protein.
Length = 348
Score = 34.7 bits (76), Expect = 0.071
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -1
Query: 685 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCEPC 524
R VC +C MI++ I+ +FH + KC C+ ++ G+++C C
Sbjct: 143 RYVCHKCHAMIDDGQHIKFRGDSFHPYHFKCKRCNNELTTASREVNGELYCLRC 196
>AF035583-1|AAD09435.1| 348|Caenorhabditis elegans UNC-97 protein.
Length = 348
Score = 34.7 bits (76), Expect = 0.071
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = -1
Query: 685 RSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFCEPC 524
R VC +C MI++ I+ +FH + KC C+ ++ G+++C C
Sbjct: 143 RYVCHKCHAMIDDGQHIKFRGDSFHPYHFKCKRCNNELTTASREVNGELYCLRC 196
>U41624-2|AAF99943.2| 351|Caenorhabditis elegans C.elegans homeobox
protein 14 protein.
Length = 351
Score = 34.3 bits (75), Expect = 0.094
Identities = 14/66 (21%), Positives = 29/66 (43%)
Frame = -1
Query: 718 SKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQV 539
S A N + ++CS C + I + +++ + +HS C +C C + + +
Sbjct: 34 SNVNAGHPNNEEAICSLCDKKIRDRFVSKVNGRCYHSSCLRCSTCKDELGATCFLREDSM 93
Query: 538 FCEPCF 521
+C F
Sbjct: 94 YCRAHF 99
>AF244368-1|AAF77181.1| 351|Caenorhabditis elegans LIM homeobox
protein CEH-14 protein.
Length = 351
Score = 34.3 bits (75), Expect = 0.094
Identities = 14/66 (21%), Positives = 29/66 (43%)
Frame = -1
Query: 718 SKSEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICYGQV 539
S A N + ++CS C + I + +++ + +HS C +C C + + +
Sbjct: 34 SNVNAGHPNNEEAICSLCDKKIRDRFVSKVNGRCYHSSCLRCSTCKDELGATCFLREDSM 93
Query: 538 FCEPCF 521
+C F
Sbjct: 94 YCRAHF 99
>Z81054-5|CAE17755.1| 313|Caenorhabditis elegans Hypothetical
protein F01D4.6b protein.
Length = 313
Score = 33.5 bits (73), Expect = 0.16
Identities = 11/46 (23%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -1
Query: 634 EIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFC-EPCFQHHVLHR 500
++D +++H +C KC C + + G+++C + ++ H +HR
Sbjct: 35 QMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHYYKDHSIHR 80
>M20244-1|AAA28108.1| 313|Caenorhabditis elegans protein (
C.elegans mec-3 geneencoding differentiation of the six
touch receptor neurons,complete cds. ).
Length = 313
Score = 33.5 bits (73), Expect = 0.16
Identities = 11/46 (23%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -1
Query: 634 EIDKQAFHSHCAKCYFCHTVPSSNIHICYGQVFC-EPCFQHHVLHR 500
++D +++H +C KC C + + G+++C + ++ H +HR
Sbjct: 35 QMDNRSYHENCVKCTICESPLAEKCFWKNGRIYCSQHYYKDHSIHR 80
>AL132952-10|CAB63384.1| 591|Caenorhabditis elegans Hypothetical
protein Y51H4A.13 protein.
Length = 591
Score = 33.5 bits (73), Expect = 0.16
Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 9/126 (7%)
Frame = -1
Query: 580 TVPSS-NIHI--CYGQVFCEPCFQH-HVLHRHKDNPNEFFKQCFEQFADPRFAENMKQFM 413
TVPS+ NIH C GQ +P H H H H NP++ Q +++ PR Q
Sbjct: 274 TVPSNTNIHNDHCSGQAPPDPYQPHGHPAH-HIPNPHQLHHQHRRRYSSPRRFHGNHQPR 332
Query: 412 AGKDGAPFVFMQGQQPPFCRCGTGPQEWFGNSEP---KKSTTTIDCRTD--DSTLELSFE 248
V G PP G G + G+ + ++ T+ TD +ST
Sbjct: 333 RNPSSTRLVIRYGSSPPEV-VGRGGVDGGGHQQQHQHQRRTSKHSATTDSVESTASTQSG 391
Query: 247 NRTDTS 230
RT++S
Sbjct: 392 ERTESS 397
>U55375-4|AAC69042.3| 287|Caenorhabditis elegans Lim domain family
protein 6 protein.
Length = 287
Score = 33.1 bits (72), Expect = 0.22
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = -1
Query: 712 SEASEGNTKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFCHTVPSSNIHICY---GQ 542
S + T+ +CS C +I + + + ++H C +C C + S+ C+ G
Sbjct: 7 SATTSSTTEDKLCSGCGCLIKDRYIYRVMEDSYHESCLRCSCCQ-LSLSSFKKCFSRHGN 65
Query: 541 VFCEPCFQHHVLH 503
++CE H +L+
Sbjct: 66 IYCE--HDHQMLY 76
>Z47811-3|CAA87787.2| 723|Caenorhabditis elegans Hypothetical
protein K02C4.4 protein.
Length = 723
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -1
Query: 694 NTKRSVCSRCLQMINENNKIEI--DKQAFHSHCAKCYFCHT 578
N+K+ C+RC + + +K+ D FH C KCY C T
Sbjct: 2 NSKQH-CNRCGKQVYPTDKVGPLKDSTFFHQGCFKCYICGT 41
>AF489839-1|AAN09795.1| 723|Caenorhabditis elegans lim and
transglutaminase domainprotein protein.
Length = 723
Score = 31.5 bits (68), Expect = 0.66
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -1
Query: 694 NTKRSVCSRCLQMINENNKIEI--DKQAFHSHCAKCYFCHT 578
N+K+ C+RC + + +K+ D FH C KCY C T
Sbjct: 2 NSKQH-CNRCGKQVYPTDKVGPLKDSTFFHQGCFKCYICGT 41
>AF000266-9|AAC71169.1| 566|Caenorhabditis elegans Hypothetical
protein W08F4.2 protein.
Length = 566
Score = 31.5 bits (68), Expect = 0.66
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 12/101 (11%)
Frame = -1
Query: 337 QEWFGNSEPKKSTTTIDC------RTDDSTL--ELSFENRTDTSD--VQESSNVEIETCG 188
++W G S P + TI R D+ TL E+ + T D +++S +E
Sbjct: 458 RQWVGGSNPSLKSITISFPHININRFDECTLFKEIEYTRITKEIDQPIKDSFMIERHDGT 517
Query: 187 VEKIE--KLTKYLQATGAGEREWKNFDGNVISESLNGWIDL 71
+ I T++ GE EW +D N+ +N +IDL
Sbjct: 518 IANIMFYPTTRFYFTLVVGEYEWIGYDTNMWINVMNNFIDL 558
>U41550-4|AAP31434.3| 412|Caenorhabditis elegans Hypothetical
protein R04A9.5 protein.
Length = 412
Score = 31.1 bits (67), Expect = 0.87
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -1
Query: 376 GQQPPFCRCGTGPQEWFGNSEPKKSTTTIDCRTDDSTLEL-SFENR-TDTSDVQESSNVE 203
G Q RCG + F N E + I+C T+D+ + F +R TDT+ E +N E
Sbjct: 217 GMQKLSERCGIRYKTIFDNFETIRKDGKIECETNDACCRIREFLSRETDTTSYIEITN-E 275
Query: 202 IETCGVEKIE 173
++T ++IE
Sbjct: 276 VQTVLEDEIE 285
>AL022288-5|CAA18366.1| 301|Caenorhabditis elegans Hypothetical
protein ZK1025.8 protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 362 WRLLPLHKNKRGTILASHKLLHILGKSGVRE-LLEALLEEFI 484
W LLP+ + + I ++ KL IL K GVR+ L+E + ++ +
Sbjct: 193 WELLPMDSDLKDRISSAAKLADILRKQGVRDTLVEQIYKDIL 234
>AL022288-1|CAA18362.1| 301|Caenorhabditis elegans Hypothetical
protein ZK1025.2 protein.
Length = 301
Score = 31.1 bits (67), Expect = 0.87
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +2
Query: 362 WRLLPLHKNKRGTILASHKLLHILGKSGVRE-LLEALLEEFI 484
W LLP+ + + I ++ KL IL K GVR+ L+E + ++ +
Sbjct: 193 WELLPMDSDLKDRISSAAKLADILRKQGVRDTLVEQIYKDIL 234
>Z81519-6|CAB04220.2| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +2
Query: 305 FLWFAITEPLLRAGTTATEWRLLPLH----KNKRGTILASHKLLHILGKSGVR 451
FL F++TEPLL T+W + L ++R +LASH L+ L +R
Sbjct: 228 FLEFSLTEPLLVLEMAGTDWLVKALTGVSCMSRRIVLLASHVLISWLDSPTIR 280
>AL034543-6|CAJ43443.1| 1631|Caenorhabditis elegans Hypothetical
protein F29C12.3 protein.
Length = 1631
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +2
Query: 305 FLWFAITEPLLRAGTTATEWRLLPLH----KNKRGTILASHKLLHILGKSGVR 451
FL F++TEPLL T+W + L ++R +LASH L+ L +R
Sbjct: 228 FLEFSLTEPLLVLEMAGTDWLVKALTGVSCMSRRIVLLASHVLISWLDSPTIR 280
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 14/107 (13%)
Frame = -1
Query: 739 GDNPGASSKSEASEGNTKR--SVCSRCLQMINENNKIEIDKQAFHS----------HCAK 596
G + E S+ N +R S ++ N ++ID + S +C +
Sbjct: 1093 GSESDIEYEKERSQENKRRFDDALSAMHELGRANQSLQIDADRYSSRKWLDDAEAINCTE 1152
Query: 595 C--YFCHTVPSSNIHICYGQVFCEPCFQHHVLHRHKDNPNEFFKQCF 461
C F TV + +C G+++C PC V NP CF
Sbjct: 1153 CGKVFSLTVRKHHCRVC-GKIYCNPCSSKSVRIASAKNPVRACNTCF 1198
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 14/107 (13%)
Frame = -1
Query: 739 GDNPGASSKSEASEGNTKR--SVCSRCLQMINENNKIEIDKQAFHS----------HCAK 596
G + E S+ N +R S ++ N ++ID + S +C +
Sbjct: 1095 GSESDIEYEKERSQENKRRFDDALSAMHELGRANQSLQIDADRYSSRKWLDDAEAINCTE 1154
Query: 595 C--YFCHTVPSSNIHICYGQVFCEPCFQHHVLHRHKDNPNEFFKQCF 461
C F TV + +C G+++C PC V NP CF
Sbjct: 1155 CGKVFSLTVRKHHCRVC-GKIYCNPCSSKSVRIASAKNPVRACNTCF 1200
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 14/107 (13%)
Frame = -1
Query: 739 GDNPGASSKSEASEGNTKR--SVCSRCLQMINENNKIEIDKQAFHS----------HCAK 596
G + E S+ N +R S ++ N ++ID + S +C +
Sbjct: 1095 GSESDIEYEKERSQENKRRFDDALSAMHELGRANQSLQIDADRYSSRKWLDDAEAINCTE 1154
Query: 595 C--YFCHTVPSSNIHICYGQVFCEPCFQHHVLHRHKDNPNEFFKQCF 461
C F TV + +C G+++C PC V NP CF
Sbjct: 1155 CGKVFSLTVRKHHCRVC-GKIYCNPCSSKSVRIASAKNPVRACNTCF 1200
>AF125445-1|AAD12803.2| 550|Caenorhabditis elegans Hypothetical
protein Y24D9B.1 protein.
Length = 550
Score = 30.3 bits (65), Expect = 1.5
Identities = 35/126 (27%), Positives = 52/126 (41%), Gaps = 9/126 (7%)
Frame = -1
Query: 580 TVPSS-NIHICYG--QVFCEPCFQH-HVLHRHKDNPNEFFKQCFEQFADPRFAENMKQFM 413
TVPS+ NIH +G Q +P H H H H NP++ Q +++ PR Q
Sbjct: 274 TVPSNTNIHNDHGPGQAPPDPYQPHGHPAH-HIPNPHQLHHQHRRRYSSPRRFHGNHQPR 332
Query: 412 AGKDGAPFVFMQGQQPPFCRCGTGPQEWFGNSEP---KKSTTTIDCRTD--DSTLELSFE 248
V G PP G G + G+ + ++ T+ TD +ST
Sbjct: 333 RNPSSTRLVIRYGSSPPEV-VGRGGVDGGGHQQQHQHQRRTSKHSATTDSVESTASTQSG 391
Query: 247 NRTDTS 230
RT++S
Sbjct: 392 ERTESS 397
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 29.9 bits (64), Expect = 2.0
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -2
Query: 654 STRITKLKLTSRPSIVTVPSAIFATRFHRPTSTS-AMVKSSASLASNITSCTDIRTTPM 481
++ IT ++ PS TVPS +T +P+S S A ++ L SN+TS T+P+
Sbjct: 283 TSTITSTGSSNPPSTSTVPSTTTSTTTPKPSSPSTAEASTTPVLTSNLTSAL-TSTSPL 340
>Z71261-2|CAA95805.1| 813|Caenorhabditis elegans Hypothetical
protein F21C3.2 protein.
Length = 813
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +1
Query: 547 HSRCGCWTME-PCGKNSTWHSDYGRPACQ 630
H+ C W+ C KN W S+ R +CQ
Sbjct: 640 HTNCAMWSRSGECNKNPLWMSENCRSSCQ 668
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -1
Query: 676 CSRCLQMINENNK-IEIDKQAFHSHCAKCYFC-HTVPSSNIHICYGQVFC 533
C C I ++ +E AFHS+C C C H + + GQ FC
Sbjct: 631 CVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAKNGQPFC 680
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical protein
T11B7.4d protein.
Length = 1424
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -1
Query: 676 CSRCLQMINENNK-IEIDKQAFHSHCAKCYFC-HTVPSSNIHICYGQVFC 533
C C I ++ +E AFHS+C C C H + + GQ FC
Sbjct: 1371 CVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAKNGQPFC 1420
>Z54237-8|CAE52902.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -1
Query: 676 CSRCLQMINENNK-IEIDKQAFHSHCAKCYFC-HTVPSSNIHICYGQVFC 533
C C I ++ +E AFHS+C C C H + + GQ FC
Sbjct: 718 CVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAKNGQPFC 767
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -1
Query: 676 CSRCLQMINENNK-IEIDKQAFHSHCAKCYFC-HTVPSSNIHICYGQVFC 533
C C I ++ +E AFHS+C C C H + + GQ FC
Sbjct: 592 CVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAKNGQPFC 641
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -1
Query: 676 CSRCLQMINENNK-IEIDKQAFHSHCAKCYFC-HTVPSSNIHICYGQVFC 533
C C I ++ +E AFHS+C C C H + + GQ FC
Sbjct: 631 CVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAKNGQPFC 680
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -1
Query: 676 CSRCLQMINENNK-IEIDKQAFHSHCAKCYFC-HTVPSSNIHICYGQVFC 533
C C I ++ +E AFHS+C C C H + + GQ FC
Sbjct: 1371 CVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAKNGQPFC 1420
>Z54235-10|CAE52905.1| 771|Caenorhabditis elegans Hypothetical
protein T11B7.4c protein.
Length = 771
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -1
Query: 676 CSRCLQMINENNK-IEIDKQAFHSHCAKCYFC-HTVPSSNIHICYGQVFC 533
C C I ++ +E AFHS+C C C H + + GQ FC
Sbjct: 718 CVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAKNGQPFC 767
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 2/50 (4%)
Frame = -1
Query: 676 CSRCLQMINENNK-IEIDKQAFHSHCAKCYFC-HTVPSSNIHICYGQVFC 533
C C I ++ +E AFHS+C C C H + + GQ FC
Sbjct: 592 CVSCRYPIEAGDRWVEALGNAFHSNCFTCARCNHNLEGESFFAKNGQPFC 641
>U00045-3|AAL02502.1| 868|Caenorhabditis elegans Temporarily assigned
gene nameprotein 204, isoform b protein.
Length = 868
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Frame = -1
Query: 724 ASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCHT-----VPSS 566
+S K ++ + + C+ C + + + ++ +H C KCY C T +
Sbjct: 784 SSQKDDSVVAVSGKHRCAHCNEELGRGAAMIVESLNLFYHLACFKCYVCKTSLGSGATGA 843
Query: 565 NIHICYGQVFCEPCFQH 515
++ + G++ C+ C+ +
Sbjct: 844 DVRVRDGRLHCQTCYSN 860
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily assigned
gene nameprotein 204, isoform a protein.
Length = 1004
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Frame = -1
Query: 724 ASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCHT-----VPSS 566
+S K ++ + + C+ C + + + ++ +H C KCY C T +
Sbjct: 920 SSQKDDSVVAVSGKHRCAHCNEELGRGAAMIVESLNLFYHLACFKCYVCKTSLGSGATGA 979
Query: 565 NIHICYGQVFCEPCFQH 515
++ + G++ C+ C+ +
Sbjct: 980 DVRVRDGRLHCQTCYSN 996
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily assigned
gene nameprotein 204, isoform c protein.
Length = 1099
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 7/77 (9%)
Frame = -1
Query: 724 ASSKSEASEGNTKRSVCSRCLQMINENNKIEIDKQA--FHSHCAKCYFCHT-----VPSS 566
+S K ++ + + C+ C + + + ++ +H C KCY C T +
Sbjct: 1015 SSQKDDSVVAVSGKHRCAHCNEELGRGAAMIVESLNLFYHLACFKCYVCKTSLGSGATGA 1074
Query: 565 NIHICYGQVFCEPCFQH 515
++ + G++ C+ C+ +
Sbjct: 1075 DVRVRDGRLHCQTCYSN 1091
>AF022974-9|AAC48035.3| 566|Caenorhabditis elegans Hypothetical
protein F26G5.1 protein.
Length = 566
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/53 (32%), Positives = 24/53 (45%)
Frame = +3
Query: 192 HVSISTLLDSWTSDVSVRFSKDSSKVESSVLQSMVVVDFFGSLLPNHSCGPVP 350
H S +LDS +SVR ++VES+ D G +P+ S P P
Sbjct: 391 HQSEKYMLDSILKSLSVRIDLGPAEVESTPRNHPAKKDQLGEPIPSRSSVPTP 443
>AF016683-8|AAM97998.1| 480|Caenorhabditis elegans Hypothetical
protein K09F6.10 protein.
Length = 480
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/34 (35%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -1
Query: 613 HSHCAKCYFCHTVPS--SNIHICYGQVFCEPCFQ 518
+ C KC F H S +H C+ FC+ C Q
Sbjct: 400 YEKCKKCGFIHRKDSYSKTVHKCHDNAFCKICRQ 433
>Z78417-10|CAB01688.2| 745|Caenorhabditis elegans Hypothetical
protein C35C5.2 protein.
Length = 745
Score = 28.7 bits (61), Expect = 4.7
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -1
Query: 415 MAGKDGAPFVFMQGQQPPFCRCGTGPQEWFGNSEPKKSTT 296
MA K GA + GTGP E +GN++ S T
Sbjct: 199 MAVKKGAKACLVYSDPKQVASLGTGPNETYGNTDKMPSNT 238
>AL132904-7|CAC35838.1| 430|Caenorhabditis elegans Hypothetical
protein Y111B2A.10a protein.
Length = 430
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Frame = -1
Query: 289 DCRTDDSTLELSFENRTDTSDVQESSNVEIETCGVEKIEKLTKYLQA-TGAGEREWKNFD 113
D +D ++ +E + D+QE + G EK+E+ K LQ+ + +WK
Sbjct: 69 DEEEEDVQIKYPYERKDAYQDLQERIERRLNDSGDEKLEQKAKELQSLIRMSQSQWKVEQ 128
Query: 112 GNVISESL 89
+ +SL
Sbjct: 129 KQQLEDSL 136
>Z71181-9|CAD44140.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = +3
Query: 456 CSKHCL----KNSLGLSLCRCK 509
C KHCL NS G SLC+C+
Sbjct: 463 CHKHCLYGFETNSAGCSLCKCR 484
>Z71178-18|CAH04640.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = +3
Query: 456 CSKHCL----KNSLGLSLCRCK 509
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>Z71178-17|CAD44089.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = +3
Query: 456 CSKHCL----KNSLGLSLCRCK 509
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>Z71178-15|CAD44087.1| 960|Caenorhabditis elegans Hypothetical
protein B0024.14b protein.
Length = 960
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = +3
Query: 456 CSKHCL----KNSLGLSLCRCK 509
C KHCL NS G SLC+C+
Sbjct: 463 CHKHCLYGFETNSAGCSLCKCR 484
>Z71178-14|CAA94886.3| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = +3
Query: 456 CSKHCL----KNSLGLSLCRCK 509
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>U20861-6|AAA62294.1| 256|Caenorhabditis elegans Temporarily
assigned gene nameprotein 327, isoform a protein.
Length = 256
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -1
Query: 691 TKRSVCSRCLQMINENNKIEIDKQAFHSHCAKCYFC-HTVPSSNIHICYGQVFCEPCFQH 515
++ S+CS+C IN + ++ FH +C +C H + + FC C+ +
Sbjct: 191 SRGSICSQCRGAINGRCVAAMGRK-FHPEHFRCSYCNHQLTKGTFKEVDRRPFCHKCYNN 249
>AL021478-4|CAJ26240.1| 671|Caenorhabditis elegans Hypothetical
protein B0024.14e protein.
Length = 671
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = +3
Query: 456 CSKHCL----KNSLGLSLCRCK 509
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>AL021478-3|CAF32233.1| 898|Caenorhabditis elegans Hypothetical
protein B0024.14d protein.
Length = 898
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = +3
Query: 456 CSKHCL----KNSLGLSLCRCK 509
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>AL021478-1|CAC35857.2| 894|Caenorhabditis elegans Hypothetical
protein B0024.14a protein.
Length = 894
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/22 (54%), Positives = 14/22 (63%), Gaps = 4/22 (18%)
Frame = +3
Query: 456 CSKHCL----KNSLGLSLCRCK 509
C KHCL NS G SLC+C+
Sbjct: 397 CHKHCLYGFETNSAGCSLCKCR 418
>Z81456-2|CAB03811.2| 309|Caenorhabditis elegans Hypothetical
protein B0462.3 protein.
Length = 309
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +3
Query: 156 KYFVSFSIFSTPHVSISTLLDSWTSDVSVRFSKDSSKVESSVLQSMVVVDFFG 314
K+FV FS +ST H + S + +SV F D+ + + ++ S +++ G
Sbjct: 162 KFFVLFSSYSTHHQAFSMNFER----LSVTFWSDNLNLNTLLISSSPIIEILG 210
>Z72504-6|CAA96604.2| 906|Caenorhabditis elegans Hypothetical
protein C29E6.4 protein.
Length = 906
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = -2
Query: 615 SIVTVPSAIFATRFHRPTSTSAMVKSSASLASNIT 511
S VP++I +T RPT+ S VKSS + S T
Sbjct: 453 STTHVPTSIRSTSSARPTTYSTTVKSSTTTVSTST 487
>Z66499-2|CAA91297.1| 183|Caenorhabditis elegans Hypothetical
protein T01B7.4 protein.
Length = 183
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 15/52 (28%)
Frame = -1
Query: 502 RHKDNPNEFFKQC----------FEQFAD--PRFAENMKQFMAG---KDGAP 392
RH DNP F + E FAD PR AEN +QF G KDG P
Sbjct: 12 RHPDNPIVFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVP 63
>U93842-1|AAB52421.1| 1409|Caenorhabditis elegans regulator of
presynaptic activity protein.
Length = 1409
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +2
Query: 431 LGKSGVRELLEALLEEFIGVVLMSVQDVMLEARLAEDLTIADVDVGRWNRVAKIALGTVT 610
+G +L + +E + ++ S ++ LE +L+ED + +V + + A + +
Sbjct: 801 VGMFSAPKLKRLMEDESLRELVCSKLNLGLEVKLSEDEYVKEVQLTKGQFKAYVKILKAC 860
Query: 611 MEGLLVNFN 637
+EG+ V+FN
Sbjct: 861 LEGIEVSFN 869
>U73946-1|AAB18328.1| 452|Caenorhabditis elegans CeLIM-7 protein.
Length = 452
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = -1
Query: 718 SKSEASEGNTKRSVCSRCLQMINENNKIEIDKQA-FHSHCAKCYFCHTVPSSN--IHICY 548
S E + +VC+ C I++ + ++ FH+ C KC C N +
Sbjct: 42 SPVEQRQHQPPMAVCAGCRLEISDRYFLRVNPNLEFHAQCLKCVQCSRPLDENQTAFVKN 101
Query: 547 GQVFC 533
GQ +C
Sbjct: 102 GQTYC 106
>U67951-2|AAB07570.2| 302|Caenorhabditis elegans Regulator of
fusion protein 2,isoform a protein.
Length = 302
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 520 QH-HVLHRHKDNPNEFFKQCFEQFADPRF 437
QH H +H D PN F + QF++P +
Sbjct: 264 QHLHTMHTFMDRPNPFMQMYQNQFSNPTY 292
>U67951-1|AAQ65207.1| 315|Caenorhabditis elegans Regulator of
fusion protein 2,isoform b protein.
Length = 315
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 520 QH-HVLHRHKDNPNEFFKQCFEQFADPRF 437
QH H +H D PN F + QF++P +
Sbjct: 277 QHLHTMHTFMDRPNPFMQMYQNQFSNPTY 305
>U49945-3|AAM51509.1| 1408|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform b protein.
Length = 1408
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +2
Query: 431 LGKSGVRELLEALLEEFIGVVLMSVQDVMLEARLAEDLTIADVDVGRWNRVAKIALGTVT 610
+G +L + +E + ++ S ++ LE +L+ED + +V + + A + +
Sbjct: 801 VGMFSAPKLKRLMEDESLRELVCSKLNLGLEVKLSEDEYVKEVQLTKGQFKAYVKILKAC 860
Query: 611 MEGLLVNFN 637
+EG+ V+FN
Sbjct: 861 LEGIEVSFN 869
>U49945-2|AAC47926.1| 1409|Caenorhabditis elegans Aboc, expulsion
defective protein3, isoform a protein.
Length = 1409
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +2
Query: 431 LGKSGVRELLEALLEEFIGVVLMSVQDVMLEARLAEDLTIADVDVGRWNRVAKIALGTVT 610
+G +L + +E + ++ S ++ LE +L+ED + +V + + A + +
Sbjct: 801 VGMFSAPKLKRLMEDESLRELVCSKLNLGLEVKLSEDEYVKEVQLTKGQFKAYVKILKAC 860
Query: 611 MEGLLVNFN 637
+EG+ V+FN
Sbjct: 861 LEGIEVSFN 869
>U34955-1|AAC47115.1| 183|Caenorhabditis elegans cyclophilin
isoform 11 (CYP-11) protein.
Length = 183
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/52 (42%), Positives = 24/52 (46%), Gaps = 15/52 (28%)
Frame = -1
Query: 502 RHKDNPNEFFKQC----------FEQFAD--PRFAENMKQFMAG---KDGAP 392
RH DNP F + E FAD PR AEN +QF G KDG P
Sbjct: 12 RHPDNPIVFLEVTAGGAPIGTIVIELFADVTPRTAENFRQFCTGEYKKDGVP 63
>AY115477-1|AAM55473.1| 303|Caenorhabditis elegans zinc finger
protein REF-2 protein.
Length = 303
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -1
Query: 520 QH-HVLHRHKDNPNEFFKQCFEQFADPRF 437
QH H +H D PN F + QF++P +
Sbjct: 265 QHLHTMHTFMDRPNPFMQMYQNQFSNPTY 293
>AF067210-1|AAC16985.1| 452|Caenorhabditis elegans Lim domain
family protein 7 protein.
Length = 452
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 3/65 (4%)
Frame = -1
Query: 718 SKSEASEGNTKRSVCSRCLQMINENNKIEIDKQA-FHSHCAKCYFCHTVPSSN--IHICY 548
S E + +VC+ C I++ + ++ FH+ C KC C N +
Sbjct: 42 SPVEQRQHQPPMAVCAGCRLEISDRYFLRVNPNLEFHAQCLKCVQCSRPLDENQTAFVKN 101
Query: 547 GQVFC 533
GQ +C
Sbjct: 102 GQTYC 106
>AC103567-8|AAL35729.1| 305|Caenorhabditis elegans Hypothetical
protein Y51F10.2 protein.
Length = 305
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
Frame = -1
Query: 682 SVCSRCLQMINENNKIE-----IDKQAFHSHCAKCYFCHTVPSSNIHICY 548
+VC RC+ +++E ++I ID+ H C C P + I Y
Sbjct: 41 TVCERCIGLLDEQSRINHNRPPIDRSFVHIRCPVCRAVTQTPRNYIRSNY 90
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,213,459
Number of Sequences: 27780
Number of extensions: 443412
Number of successful extensions: 1609
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1609
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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