Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12m11
(840 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 42 1e-04
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 40 3e-04
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 37 0.004
SPBC3D6.04c |mad1||mitotic spindle checkpoint protein Mad1|Schiz... 36 0.005
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 34 0.022
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 33 0.038
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 33 0.050
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 32 0.088
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 31 0.15
SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyc... 31 0.20
SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces ... 31 0.20
SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomy... 31 0.27
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 31 0.27
SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|c... 30 0.36
SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|ch... 29 0.82
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 29 0.82
SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces pomb... 29 1.1
SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3 B... 29 1.1
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 28 1.4
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 28 1.9
SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces pombe... 28 1.9
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 28 1.9
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 27 2.5
SPBC36.08c |cog2||Golgi transport complex subunit Cog2 |Schizosa... 27 2.5
SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyc... 27 2.5
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 27 2.5
SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 3.3
SPAC977.06 |||S. pombe specific DUF999 family protein 3|Schizosa... 27 3.3
SPBPB2B2.07c |||S. pombe specific DUF999 protein family 7|Schizo... 27 3.3
SPBC1348.07 |||S. pombe specific DUF999 protein family 6|Schizos... 27 3.3
SPAC212.01c |||S. pombe specific DUF999 family protein 2|Schizos... 27 4.4
SPBCPT2R1.04c |||S. pombe specific DUF999 protein family 10|Schi... 27 4.4
SPAC212.04c |||S. pombe specific DUF999 family protein 1|Schizos... 27 4.4
SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein fa... 27 4.4
SPBC1348.01 |||S. pombe specific DUF999 protein family 5|Schizos... 27 4.4
SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces po... 27 4.4
SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 27 4.4
SPAC750.06c |||S. pombe specific DUF999 protein family 4|Schizos... 27 4.4
SPBC354.14c |vac8||vacuolar protein Vac8|Schizosaccharomyces pom... 27 4.4
SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces p... 26 5.8
SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces pombe... 26 5.8
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 26 5.8
SPBC11C11.04c |alp1||tubulin specific chaperone cofactor D |Schi... 26 5.8
SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66 |... 26 5.8
SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces p... 26 7.6
SPBC1677.02 |dpm3||dolichol-phosphate mannosyltransferase subuni... 26 7.6
SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces pomb... 26 7.6
SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr 3|||Ma... 26 7.6
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 41.5 bits (93), Expect = 1e-04
Identities = 50/201 (24%), Positives = 93/201 (46%), Gaps = 26/201 (12%)
Frame = -3
Query: 616 LEKYSSLHKMSTADENTSTLLGVLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQ 437
LEK + L K E + L + + +EQ+ ++ +Q + ++L + +QLEQ
Sbjct: 722 LEKLNDLEKSLVLSERSKDELD-----ESYKSLQEQLASKKIEVQNVSSQLSICNSQLEQ 776
Query: 436 LK------LSRHTSNESKKEKIKALKESIDTKLNKLK----------DQENEKVELMMEW 305
S + S K+K+KA ++++KL+ L+ + N++ ++
Sbjct: 777 SNHIVDNLKSENLLLTSVKDKLKADLSNLESKLSSLQQDNFHMKAQIESSNQEYTATVDS 836
Query: 304 LNHRLLEV--------SKFNDDSSEL--LTLKTRVLELKSKILHLQILQNIFTETNQSIK 155
+N R+LE+ SK ++ S ++ LTL+ + + L LQ+ NI TE Q I
Sbjct: 837 MNSRILELSNDLRVANSKLSECSDDVRRLTLQNSFDLREHQTLVLQLQSNI-TELKQDIT 895
Query: 154 AYTEVHKDIKECITETEERIK 92
V ++ TE +ER+K
Sbjct: 896 LQRTVRNQLEIQTTELKERLK 916
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/105 (18%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Frame = -3
Query: 406 SKKEKIKALKESIDTKLNKLKDQENEKVELMMEWLNHRLLEVSKFNDDSSELLTLKTRVL 227
+ ++K+ E D ++ K ENE ++ E+L + D S L ++ +
Sbjct: 68 NSEKKLLQSNERYDLLEDERKLLENELSQIK-EYLREKSSSYDTVLHDCSSLKSVNEALK 126
Query: 226 ELKSKILHLQI-LQNIFTETNQSIKAYTEVHKDIKECITETEERI 95
+ + + L LQN+ ++ + ++ + KD+K+ + + ++
Sbjct: 127 QAQDQNLKQTAQLQNLLSDKEKEVEKKITIIKDLKDALASSTHQV 171
Score = 26.2 bits (55), Expect = 5.8
Identities = 38/179 (21%), Positives = 77/179 (43%), Gaps = 11/179 (6%)
Frame = -3
Query: 535 STELTFEEQIELN---EVFLQKIQNKLPVLVTQLE-QLKLSRHTSNESKKEKIKALKESI 368
+ + +FEEQ+E + E L+ N L V+ LE QLKL+ + +I + E
Sbjct: 328 AAQSSFEEQLESHKEAEASLKSQINFLEKEVSSLESQLKLANERLRHYDEIEISDMSELK 387
Query: 367 DTKL--NKLKDQENEKVELMMEWLNHRLLEVSKFNDDSSELLTLK---TRVLELKSKILH 203
+ L N +K + + + + + RL K+ E+ L+ V+E ++ + H
Sbjct: 388 YSNLLNNSMKGFKGQ--SSVSDLYSERLYYKQKYEQTCQEVERLQRSYNHVME-EANLQH 444
Query: 202 LQILQNI--FTETNQSIKAYTEVHKDIKECITETEERIKHFRSIIESDCA*NSDEDRLT 32
+ + F + I A +E ++ E + + R + ++ + C N ++ T
Sbjct: 445 PLVKEQFKRFAHMQREIVAMSEQYQKSLEDCQKAKSRYEQLETLFKDKCTENKHYEQET 503
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 40.3 bits (90), Expect = 3e-04
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 7/185 (3%)
Frame = -3
Query: 619 NLEKYSSLHKMSTADENTSTLLGVLKHISTELTFEEQI------ELNEVFLQKIQNKLPV 458
NL+KYSS + A TS L VL+H+ +E + E + N VF Q +
Sbjct: 286 NLKKYSSFLALKEAVSMTSEQLRVLEHLLSECSHEINVLSQQSKNFNGVFESSYQPLIND 345
Query: 457 LVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLKDQENEKVELMMEWLNHRLLEVS 278
L Q+ ++ N +K E L S++ KL K +E + + E N + +
Sbjct: 346 LDHQISVMQNDEKRINNAKTE----LSLSLEKKLEAKKQKEKVYKDKLDELANLETMVLE 401
Query: 277 KFNDDSSELLTLKTRVLELKSKILHLQILQNIFTETNQSIKAYTEV-HKDIKECITETEE 101
K ++ K R+++L L + + E + KA+ V + +K + +E
Sbjct: 402 KKKAVATREAANKIRLVDLNDLELQKDLSTYLSKELASTEKAFRLVKQQTVKSSHSHYQE 461
Query: 100 RIKHF 86
I F
Sbjct: 462 LITKF 466
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 36.7 bits (81), Expect = 0.004
Identities = 39/170 (22%), Positives = 83/170 (48%), Gaps = 10/170 (5%)
Frame = -3
Query: 550 VLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQ-LEQLKLSRHTSNESKKEKIKALKE 374
+++ +ST ++ + ++ L KL L+ + LK SR TSN +E++ LKE
Sbjct: 320 LIEDLSTRISEFDNLKSERDTLSIKNEKLEKLLRNTIGSLKDSR-TSNSQLEEEMVELKE 378
Query: 373 SIDTKLNKLKDQENEKVELMMEWLNHRLL-EVSKFNDDSSE----LLTLKTRVLELKSKI 209
S T ++L D E++ E N L + ++ ++ S + + +++ E +S +
Sbjct: 379 SNRTIHSQLTDAESKLSSFEQE--NKSLKGSIDEYQNNLSSKDKMVKQVSSQLEEARSSL 436
Query: 208 LHLQ-ILQNIFTE---TNQSIKAYTEVHKDIKECITETEERIKHFRSIIE 71
H L I +E N+ IK + ++ +D++ C+ + +K ++I+
Sbjct: 437 AHATGKLAEINSERDFQNKKIKDFEKIEQDLRACLNSSSNELKEKSALID 486
Score = 27.1 bits (57), Expect = 3.3
Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 13/181 (7%)
Frame = -3
Query: 568 TSTLLGVLKHISTELTFEEQ---------IELNEVFLQKIQNKLPVL--VTQLEQLKLSR 422
T+ L L H++ E+ +E I L E + Q + +L +LE +
Sbjct: 1392 TNKLKNQLDHLNQEIRLKEDVLKEKESLIISLEESLSNQRQKESSLLDAKNELEHMLDDT 1451
Query: 421 HTSNESKKEKIKALKESIDTKLNKLKDQENEKVELMMEWLNHRLLEVSKFNDDSSELL-T 245
N S EKI+++ S+D K +L VE +L + K + +S L+
Sbjct: 1452 SRKNSSLMEKIESINSSLDDKSFELA----SAVE--------KLGALQKLHSESLSLMEN 1499
Query: 244 LKTRVLELKSKI-LHLQILQNIFTETNQSIKAYTEVHKDIKECITETEERIKHFRSIIES 68
+K+++ E K KI + +Q + E S Y D I + E I+ +++
Sbjct: 1500 IKSQLQEAKEKIQVDESTIQELDHEITASKNNYEGKLNDKDSIIRDLSENIEQLNNLLAE 1559
Query: 67 D 65
+
Sbjct: 1560 E 1560
>SPBC3D6.04c |mad1||mitotic spindle checkpoint protein
Mad1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 689
Score = 36.3 bits (80), Expect = 0.005
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 2/118 (1%)
Frame = -3
Query: 514 EQIELNEVFLQKIQNKLPVLVTQLEQLKLS-RHTSNESKKEKIKALKESIDTKLNKLKDQ 338
EQ+E L + +L L +QL+ S + S+ + EKI A + ++L KLK
Sbjct: 193 EQLETKCKELAAAEQQLQELSVHNQQLEESIKQVSSSIELEKINAEQRLQISELEKLKAA 252
Query: 337 ENEKVELMMEWLNHRLLEVSKFNDDSSELLTLKTRVLELKSKILHLQI-LQNIFTETN 167
+ E++E + N+R +E+ K ++ ++L + R E + K+ L++ + I TE N
Sbjct: 253 QEERIEKLSS--NNRNVEILK--EEKNDLESKLYRFEEYRDKVATLELENEKIQTELN 306
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 34.3 bits (75), Expect = 0.022
Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 2/116 (1%)
Frame = -3
Query: 523 TFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLK 344
T E I N+ L + + +L LV+ L+ + S+ ++K K ++ KES+ L KLK
Sbjct: 767 TQERLISENDKLLAE-RERLMSLVSDLQTFLNQQQLSDAARKVKFESEKESLSLSLQKLK 825
Query: 343 DQENEKVELMMEWLNHRLLEVS--KFNDDSSELLTLKTRVLELKSKILHLQILQNI 182
+ NEK+ + L + LE S +++ L+ K + E K+L Q + I
Sbjct: 826 -ESNEKMSNDLHSL-QKSLEKSGIEYSSRIKTLMLEKQSLSEDNRKLLDNQQMMEI 879
Score = 30.3 bits (65), Expect = 0.36
Identities = 28/128 (21%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Frame = -3
Query: 532 TELTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLN 353
TE+ EE++E +V Q++ + +L++ +L R N+ ++++KAL+E++ +
Sbjct: 1493 TEIPNEEEMERKKVMQQEVLRLRSRIAKELQKNELLR-KQNQVLQDQVKALQETVVSSEE 1551
Query: 352 --------KLKDQEN-EKVELMMEWLNHRLL--EVSKFNDDSSELLTLKTRVLELKSKIL 206
KD EN +K E M+ + +S F+ +++ T + E + +IL
Sbjct: 1552 AESASVHADTKDLENLKKTEEMLSVTFQVIFNESISDFSTSTADFTTFVQKEWEKRREIL 1611
Query: 205 HLQILQNI 182
+ + +
Sbjct: 1612 QKDVEEQV 1619
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 33.5 bits (73), Expect = 0.038
Identities = 37/152 (24%), Positives = 70/152 (46%), Gaps = 6/152 (3%)
Frame = -3
Query: 592 KMSTADENTSTLLGVLKHISTELT-FEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHT 416
KM D +L L+ + TE + ++ L + L K Q + ++L HT
Sbjct: 793 KMEATDMLNVSLHESLRSVQTENSELVTEMALLKAELVKKQAIIDANANIYDKLTAD-HT 851
Query: 415 SNESKKEKIKA-LKESIDTKLNKLKDQENEKVELMMEWL---NHRLLEVSKFNDDSSELL 248
+ E+ I LKE++D LN D +N ++EL+ + + N +L + K + S +
Sbjct: 852 NYETVSADINQNLKETLDKLLNGSSDFKNNEIELLHDQIRITNAKLEKREKLINASKYIE 911
Query: 247 -TLKTRVLELKSKILHLQILQNIFTETNQSIK 155
TL++ + E K+ +L+ E N +++
Sbjct: 912 DTLRSEIQEAAEKVSNLEFSNFNLKEENSNMQ 943
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 33.1 bits (72), Expect = 0.050
Identities = 31/136 (22%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Frame = -3
Query: 457 LVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLKDQENEKVELMMEWLNHRLLEVS 278
L+ QL + K E + + +K+++ + NKL+ NE+ + + N +S
Sbjct: 241 LIDQLCKQKEVFSAEKEKRSDHLKSIQSEVSNLWNKLQVSPNEQSQ-FGDSSNINQENIS 299
Query: 277 KFNDDSSELLTLKTRVLELKSKILHLQILQ---NIFTETNQSIKAYTEVHKDI--KECIT 113
+ + +L LK L + + QILQ ++F Q K++T +++DI ++ +T
Sbjct: 300 LWETELEKLHQLKKEHLPIFLEDCRQQILQLWDSLFYSEEQR-KSFTPMYEDIITEQVLT 358
Query: 112 ETEERIKHFRSIIESD 65
E IK + + ++
Sbjct: 359 AHENYIKQLEAEVSAN 374
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 32.3 bits (70), Expect = 0.088
Identities = 39/174 (22%), Positives = 83/174 (47%), Gaps = 7/174 (4%)
Frame = -3
Query: 517 EEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLKDQ 338
EE ++L+ L +Q + L +L L L + + SK ++ L++ I
Sbjct: 1929 EENLQLHRQ-LGVLQKEKKDLELKLFDLDLKTYPISTSKD--VRMLQKQISDLEASFAAS 1985
Query: 337 ENEKVELMMEWLNH----RLLE--VSKFNDDSSELLTLKTRVLELKSKILH-LQILQNIF 179
+ E+++ + E N R LE +SKF+DD + + +R+ E +++ + L+ +Q
Sbjct: 1986 DIERIKGIDECRNRDRTIRQLEAQISKFDDDKKRIQSSVSRLEERNAQLRNQLEDVQASE 2045
Query: 178 TETNQSIKAYTEVHKDIKECITETEERIKHFRSIIESDCA*NSDEDRLTVK*NK 17
T+ +++ ++ +E + E +RS++E S E RL+++ N+
Sbjct: 2046 TQWKFALRRTEHALQEERERVKSLETDFDKYRSLLEGQRVKRS-ESRLSMRSNR 2098
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 31.5 bits (68), Expect = 0.15
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 5/112 (4%)
Frame = -3
Query: 346 KDQENEKVELMMEWLNHRLL--EVSKFNDDSSELLTLKTRVLELKSKILHLQI---LQNI 182
K E+ K+ L E N LL ++S +N +++L K + LE + IL ++ N
Sbjct: 928 KTIEDLKLALQDELKNRNLLMDDISSYNKQTTKLQE-KIKWLERERSILIDELESYRSNQ 986
Query: 181 FTETNQSIKAYTEVHKDIKECITETEERIKHFRSIIESDCA*NSDEDRLTVK 26
F N ++ E+ + +KE E E HF E + +DE +L +K
Sbjct: 987 FNYQNNLVQDKNELEERLKEIQKELEVYNNHFMKQAELMTSNVTDESQLMLK 1038
Score = 28.7 bits (61), Expect = 1.1
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 9/151 (5%)
Frame = -3
Query: 574 ENTSTLLGVLKHISTELTFEEQIELNEVFLQKIQN-----KLPVLVTQLEQLKLSRHTSN 410
E L V K + T L + +LNE+ + +N K+ + + ++L
Sbjct: 496 ETNIRLQEVTKELET-LRMKNSNDLNEIHDLREENEGLTLKIDSITKEKDRLINELEQRI 554
Query: 409 ESKKEKIKALKESIDTKLNKLKDQENEKVELMMEWLNHRLLEVSKFNDDSSELLTLK--- 239
+S + + L +ID NKLKD+E E +M ++ ++ +F++ ++L +
Sbjct: 555 KSYEVNVSELNGTIDEYRNKLKDKE-ETYNEVMNAFQYKDNDLRRFHESINKLQDREKEL 613
Query: 238 TRVLELKSKIL-HLQILQNIFTETNQSIKAY 149
T LE K+ ++ L+ + + +SIK Y
Sbjct: 614 TSNLEKKNLVISSLRETVAMLEKERESIKKY 644
>SPAC25G10.07c |cut7||kinesin-like protein Cut7|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 31.1 bits (67), Expect = 0.20
Identities = 30/139 (21%), Positives = 60/139 (43%), Gaps = 7/139 (5%)
Frame = -3
Query: 496 EVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLKDQENEKVEL 317
E L N+L + +T++ + S + +S + S+D +++LKD +N ++
Sbjct: 637 EELLNTHSNQLLISMTKITEHFQSLDEALQSARSSCAVPNSSLDLIVSELKDSKNSLLDA 696
Query: 316 MMEWLNHRLLEVSKF-NDDSSELLTL----KTRVLELKSKILHLQILQNIFTETNQSIK- 155
+ L + K N SSEL+ L K +L ++ L LQ+ E+ + +
Sbjct: 697 LEHSLQDISMSSQKLGNGISSELIELQKDMKESYRQLVQELRSLYNLQHTHEESQKELMY 756
Query: 154 -AYTEVHKDIKECITETEE 101
++ +K C T +
Sbjct: 757 GVRNDIDALVKTCTTSLND 775
>SPCC1020.02 |spc7||kinetochore protein Spc7|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1364
Score = 31.1 bits (67), Expect = 0.20
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = -3
Query: 436 LKLSRHTSNESKKEKIKALKESIDTKLNKLKDQENEKVELM 314
+KL + SNE +KE+I + T L +L+ QE + EL+
Sbjct: 766 VKLPQQPSNEDEKERITTADYADSTSLERLESQEPNRNELV 806
>SPCP25A2.02c |rhp26||SNF2 family helicase Rhp26|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 973
Score = 30.7 bits (66), Expect = 0.27
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Frame = -3
Query: 448 QLEQLKLSRHTSN-ESKKEKIKALKESIDTKLNKLKDQENEKVEL 317
++E+ +L + S KEKI+ L E ID++L K+ +EN + +L
Sbjct: 38 EIEKKRLQKVRKEISSVKEKIRRLDERIDSRLTKISVKENFRKQL 82
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 30.7 bits (66), Expect = 0.27
Identities = 26/122 (21%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Frame = -3
Query: 454 VTQLEQLKLSRHTSN---ESKKEKIKALKESIDTKLNKLKDQENEKVELMMEWLNHRLLE 284
++++E L+ S SN +S K +++ALK + K K++ + E + E + +
Sbjct: 227 LSRIEMLESSLAKSNSLLDSSKSEMEALKAKSISDATKHKNEIFQLEEKLHEASHEAEIS 286
Query: 283 VSKFNDDSSELLTLKTR-VLELKSKI-LHLQILQNIFTETNQSIKAYTEVHKDIKECITE 110
+ K ND + + L+ L ++ +L+++Q + + + E+ I E
Sbjct: 287 IKKLNDAENRIKELENNPTLSFNPELEKNLKLMQELIVAESSKTQHIVELESCIDSLKAE 346
Query: 109 TE 104
TE
Sbjct: 347 TE 348
>SPAC2C4.09 |||DUF1640 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 216
Score = 30.3 bits (65), Expect = 0.36
Identities = 18/83 (21%), Positives = 34/83 (40%)
Frame = -3
Query: 550 VLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKES 371
V H E F + L F ++ N QL +L+ + S+ K++ L
Sbjct: 115 VALHSQVEQLFSDVERLKTSFRDQLNNSTSEARLQLNIDRLNHYDETASQDLKLRELSAE 174
Query: 370 IDTKLNKLKDQENEKVELMMEWL 302
IDT+++ + Q ++W+
Sbjct: 175 IDTEMSNFRTQLASFKTQTLQWV 197
>SPAC2G11.05c |||BRO1 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 701
Score = 29.1 bits (62), Expect = 0.82
Identities = 31/179 (17%), Positives = 75/179 (41%), Gaps = 1/179 (0%)
Frame = -3
Query: 598 LHKMSTADENTSTLLGVLKHISTE-LTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSR 422
+ ++S E + L K+ +T+ L + L + L K + + + + +S
Sbjct: 503 IFELSAQSERILSNLAEKKNPNTDQLLLQANSYLAQWDLLKDERNMLKKLGSNDYFNISM 562
Query: 421 HTSNESKKEKIKALKESIDTKLNKLKDQENEKVELMMEWLNHRLLEVSKFNDDSSELLTL 242
++++ +K +E++D K N + +E +++ + L K + SE+ +
Sbjct: 563 YSNHTDIHSLLKCFREAVDAKWNFRRQRERQEIIIQNVEKLKSYLNSFKVQAECSEISKI 622
Query: 241 KTRVLELKSKILHLQILQNIFTETNQSIKAYTEVHKDIKECITETEERIKHFRSIIESD 65
+ E + K L Q+++ TE+ +++ I EER + + E++
Sbjct: 623 LSFSQETEKKYKFLL----------QTVRNETEIARELYNIICRAEERYSQYENRYENE 671
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 29.1 bits (62), Expect = 0.82
Identities = 27/110 (24%), Positives = 55/110 (50%), Gaps = 3/110 (2%)
Frame = -3
Query: 484 QKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESI---DTKLNKLKDQENEKVELM 314
+ ++++L TQ++ S TSN K++I +LK+++ + + +L EK M
Sbjct: 424 ESLKSRLLQSRTQMQTELDSYITSNSQLKDEITSLKQTVSESEAERKRLFSSAQEKQLQM 483
Query: 313 MEWLNHRLLEVSKFNDDSSELLTLKTRVLELKSKILHLQILQNIFTETNQ 164
E +N +L + + N++ LK + +L++K L L+ + E Q
Sbjct: 484 KETVN-KLTSLQEQNNEFDR--QLKEQEEDLQNKEEELTELRKLLREQTQ 530
>SPBC336.15 |pic1|SPBC685.01|INCENP-like|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1018
Score = 28.7 bits (61), Expect = 1.1
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = -3
Query: 313 MEWLNHRLLEVSK--FNDDSSELLTLKTRVLE 224
M+WLN +LEVSK D EL+ T++ E
Sbjct: 36 MDWLNEHMLEVSKLQLESDIYELVRTPTKIKE 67
>SPCC1919.15 |brl1|SPCC790.01, rfp2|ubiquitin-protein ligase E3
Brl1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 692
Score = 28.7 bits (61), Expect = 1.1
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 1/129 (0%)
Frame = -3
Query: 505 ELNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLKDQENEK 326
E E+ KL + LE S + + + + ++ E ++TK K + EK
Sbjct: 426 EKEEISASSALEKLIKNNSCLEAELPSMYAAFDQSQSRLLKKYEELETKEKKALEMHYEK 485
Query: 325 VELMMEWLNHRLLEVSKFNDD-SSELLTLKTRVLELKSKILHLQILQNIFTETNQSIKAY 149
++ K D +E TLK + I LQ ++ T+ S+KA
Sbjct: 486 ARATQKYF-----AAMKARDILMTEKKTLKLAENKEHDYIGKLQEREHALTKYESSLKAE 540
Query: 148 TEVHKDIKE 122
EV+K IKE
Sbjct: 541 LEVYKQIKE 549
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 28.3 bits (60), Expect = 1.4
Identities = 23/90 (25%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = -3
Query: 583 TADENTSTLLGVLKH-ISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNE 407
++++ T+ ++ LK I+T EE+ E EV Q IQ+ + +++ R +
Sbjct: 2 SSNKVTAAIIDYLKQAITTGSISEEEKESLEVAAQCIQDSFKIKPEEIKPKSGDRLVAAF 61
Query: 406 SKKEKIKALKESIDTKLNKLKDQENEKVEL 317
+ EK+ ++E +NK +E EK++L
Sbjct: 62 EEYEKLHPVEEDSTAHVNK---EEAEKLKL 88
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 27.9 bits (59), Expect = 1.9
Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 5/158 (3%)
Frame = -3
Query: 496 EVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLKDQENEKVEL 317
E FL ++ + LEQL+ + E K K +K ++ E+
Sbjct: 1136 EAFLVDLKAIPEISRFNLEQLEQDCNDICERMKNVEKDFSNEGIFSNHKALHPDDHICEV 1195
Query: 316 MMEWLNHRLLEVSKFNDDSSEL-LTLKTRVLELKSKILHLQILQNIFTETNQSIKAYTEV 140
M+ W+ V + N D +EL TLKT +L F N+ I Y +
Sbjct: 1196 MVPWIPSGKSMVDELNSDITELKTTLKTTLLMYGENPDEPTSSARFFNNLNEIILEYKKA 1255
Query: 139 HKDIKECITETEE----RIKHFRSIIESDCA*NSDEDR 38
+ + + + EE R++ ++ ++S+ A NS +
Sbjct: 1256 -STVNQKMEKEEELAFLRLQALKASVKSNNAENSGSSK 1292
>SPCC584.03c |||RanGTP-binding protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 551
Score = 27.9 bits (59), Expect = 1.9
Identities = 18/79 (22%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = -3
Query: 268 DDSSELLTLKTRVLELKSKIL-HLQILQNIFTETNQSIKAYTEVHKDIKECITETEERIK 92
DD SEL ++KT++LE+ + +++++ + N++ K+ ++ + + E+ K
Sbjct: 45 DDQSELESVKTQLLEMIRVVTPAIELIEIMSVGENENFKSTKQL---VDSLHADIEQFTK 101
Query: 91 HFRSIIESDCA*NSDEDRL 35
H S S+ +S+++ L
Sbjct: 102 HVLSAAHSEFPPSSEKETL 120
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 27.9 bits (59), Expect = 1.9
Identities = 29/119 (24%), Positives = 56/119 (47%), Gaps = 5/119 (4%)
Frame = -3
Query: 448 QLEQLKLSRHTSNESKKEKI---KALKESIDTKLNKLKDQENEKV--ELMMEWLNHRLLE 284
++E + NES K K+ KAL+ESI + K++ + ++V + + N++
Sbjct: 8 EVELYSIDLKNRNESAKIKLAYAKALEESILCETRKIEQEIKDQVVQKENKTYFNNKFDN 67
Query: 283 VSKFNDDSSELLTLKTRVLELKSKILHLQILQNIFTETNQSIKAYTEVHKDIKECITET 107
K D L + R+ E+ L +Q Q+I E ++ ++E + + +TET
Sbjct: 68 RYKLRDLEKNLAEEEVRITEM----LTIQ-RQDIAIERRKNTNCFSESSQVDQYSVTET 121
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 27.5 bits (58), Expect = 2.5
Identities = 20/71 (28%), Positives = 38/71 (53%)
Frame = -3
Query: 307 WLNHRLLEVSKFNDDSSELLTLKTRVLELKSKILHLQILQNIFTETNQSIKAYTEVHKDI 128
WLN +L + +D ++ L+TR+L+L SK++ L ++I E + K T++H +
Sbjct: 296 WLN--ILSSQRADDKEFDVNQLETRILQLFSKVVQLCKSEDI--EGSILNKDMTQLHHLL 351
Query: 127 KECITETEERI 95
+ E+ I
Sbjct: 352 ENLSKESRLHI 362
>SPBC36.08c |cog2||Golgi transport complex subunit Cog2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 191
Score = 27.5 bits (58), Expect = 2.5
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Frame = -3
Query: 451 TQLEQLKLSRHTSNESKKEKIKAL---KESIDTKLNKLKDQENEKVELMMEWLNHRLLEV 281
T++ L S H S E K ++L I L +D ENEK+ L ++L+
Sbjct: 88 TKVSTLISSIHRSEEQLKNSKQSLIGHSTEIQNNLKHKQDVENEKLIASNLLLLDQILKF 147
Query: 280 SKFNDDSSEL 251
K ND S L
Sbjct: 148 LKSNDSSHPL 157
>SPCC188.07 |ccq1||telomere maintenence protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 735
Score = 27.5 bits (58), Expect = 2.5
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 14/143 (9%)
Frame = -3
Query: 547 LKHISTELT-FEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKES 371
+ ++ ELT +Q E ++Q+ N+ L+ + + N + +K KE
Sbjct: 593 IANLKKELTHLAKQQEFGFKYVQEFSNE------DLQGKLIEANEKNYKLTQLLKTQKED 646
Query: 370 IDTKLNKLK-------DQENEKVELMMEW-----LNHRLLE-VSKFNDDSSELLTLKTRV 230
D N+ + +Q E +L E +N +++E V +ND E L K
Sbjct: 647 ADFITNQYQNASTFAAEQSKEVAKLQAECKRLQAINSKVMEEVKVYNDSRVEALLAKVSS 706
Query: 229 LELKSKILHLQILQNIFTETNQS 161
LE KIL + L FT NQS
Sbjct: 707 LEETLKILEQKSLPK-FTPHNQS 728
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 27.5 bits (58), Expect = 2.5
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Frame = -3
Query: 517 EEQIELNEVFLQKIQNKLPVL-VTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLKD 341
EE + E K N L L +T+ E L + NE K+ I ALKES K N K
Sbjct: 634 EENNKAKEDSTSKTSNLLEQLKMTEAEVDSLRKE--NEENKQVI-ALKESELVKSNDNKL 690
Query: 340 QENEKVELMMEWLNHRLLEVSKFNDDSSELL----TLKTRVL-ELKSKILHLQILQNIFT 176
NE++E + + L+ E+ L LK R EL S L+ + I +
Sbjct: 691 LLNEQIESLNDQLSQLKTEMESVTTSKESLADYLSNLKERHNDELDSLNKKLREFEGILS 750
Query: 175 ETNQSIKAYTE 143
+N S+K+ E
Sbjct: 751 -SNSSLKSEIE 760
>SPBC713.09 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 395
Score = 27.1 bits (57), Expect = 3.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -3
Query: 448 QLEQLKLSRHTSNESKKEKIKALKESID 365
+LE+ + H NE K +KIK LKE I+
Sbjct: 148 ELEKQVKTLHDLNEQKDKKIKELKERIN 175
>SPAC977.06 |||S. pombe specific DUF999 family protein
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 189
Score = 27.1 bits (57), Expect = 3.3
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = -3
Query: 403 KKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKFNDDSSELLTLKTRVL 227
K EK+ K+++ T + K KD+ N K + + +LN+ E SKF+D + TR
Sbjct: 18 KPEKVN--KQNLFTNIIKPQKDKINIKTDKIKFFLNNLFTEFSKFHDSCYPDGRISTR-S 74
Query: 226 ELKSKILHLQILQNIFT-ETNQSIKAYTEV 140
+L+ +L + + +F + N +K + +
Sbjct: 75 KLRWPLLIIWCILIVFAIDKNFEVKDFLSI 104
>SPBPB2B2.07c |||S. pombe specific DUF999 protein family
7|Schizosaccharomyces pombe|chr 2|||Manual
Length = 165
Score = 27.1 bits (57), Expect = 3.3
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = -3
Query: 403 KKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKFNDDSSELLTLKTRVL 227
K EK+ K+++ T + K KD+ N K + + +LN+ E SKF+D + TR
Sbjct: 38 KPEKVN--KQNLFTNIIKPQKDKINIKTDKIKFFLNNLFTEFSKFHDSCYPDGRISTR-S 94
Query: 226 ELKSKILHLQILQNIFT-ETNQSIKAYTEV 140
+L+ +L + + +F + N +K + +
Sbjct: 95 KLRWPLLIIWCILIVFAIDKNFEVKDFLSI 124
>SPBC1348.07 |||S. pombe specific DUF999 protein family
6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 230
Score = 27.1 bits (57), Expect = 3.3
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = -3
Query: 403 KKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKFNDDSSELLTLKTRVL 227
K EK+ K+++ T + K KD+ N K + + +LN+ E SKF+D + TR
Sbjct: 18 KPEKVN--KQNLFTNIVKPQKDKINIKTDKIKFFLNNLFTEFSKFHDSCYPDGRISTR-S 74
Query: 226 ELKSKILHLQILQNIFT-ETNQSIKAYTEV 140
+L+ +L + + +F + N +K + +
Sbjct: 75 KLRWPLLIIWCILIVFAIDKNFEVKDFLSI 104
>SPAC212.01c |||S. pombe specific DUF999 family protein
2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = -3
Query: 445 LEQ-LKLSRHTSNESKKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKF 272
LEQ L L + + ++ + ++S+ T K KD+ N K + E+LN E SKF
Sbjct: 30 LEQGLDLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEFLNDLFTEFSKF 89
Query: 271 ND 266
++
Sbjct: 90 HN 91
>SPBCPT2R1.04c |||S. pombe specific DUF999 protein family
10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 280
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = -3
Query: 445 LEQ-LKLSRHTSNESKKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKF 272
LEQ L L + + ++ + ++S+ T K KD+ N K + E+LN E SKF
Sbjct: 30 LEQGLDLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEFLNDLFTEFSKF 89
Query: 271 ND 266
++
Sbjct: 90 HN 91
>SPAC212.04c |||S. pombe specific DUF999 family protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 288
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = -3
Query: 445 LEQ-LKLSRHTSNESKKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKF 272
LEQ L L + + ++ + ++S+ T K KD+ N K + E+LN E SKF
Sbjct: 30 LEQGLDLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEFLNDLFTEFSKF 89
Query: 271 ND 266
++
Sbjct: 90 HN 91
>SPBCPT2R1.01c ||SPBPB2B2.20c|S. pombe specific DUF999 protein
family 9|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = -3
Query: 445 LEQ-LKLSRHTSNESKKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKF 272
LEQ L L + + ++ + ++S+ T K KD+ N K + E+LN E SKF
Sbjct: 30 LEQGLDLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEFLNDLFTEFSKF 89
Query: 271 ND 266
++
Sbjct: 90 HN 91
>SPBC1348.01 |||S. pombe specific DUF999 protein family
5|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = -3
Query: 445 LEQ-LKLSRHTSNESKKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKF 272
LEQ L L + + ++ + ++S+ T K KD+ N K + E+LN E SKF
Sbjct: 30 LEQGLDLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEFLNDLFTEFSKF 89
Query: 271 ND 266
++
Sbjct: 90 HN 91
>SPAC57A7.11 |mip1||WD repeat protein Mip1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1313
Score = 26.6 bits (56), Expect = 4.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = -3
Query: 373 SIDTKLNKLKDQENEKVELMMEW 305
S D + +D ENEKVEL+ W
Sbjct: 1056 SSDGTIKLYRDYENEKVELVTSW 1078
>SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 433
Score = 26.6 bits (56), Expect = 4.4
Identities = 14/68 (20%), Positives = 35/68 (51%)
Frame = -3
Query: 496 EVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLKDQENEKVEL 317
++ L+++ ++ V+ Q EQL L + ++++E ++ ++ + ++QE E
Sbjct: 24 QMALEELNQQIEVIQRQEEQLALRKKAIEDARQEVLQQIQHRKFRQYLHEREQEARLQEY 83
Query: 316 MMEWLNHR 293
+E L R
Sbjct: 84 YLEQLQER 91
>SPAC750.06c |||S. pombe specific DUF999 protein family
4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 280
Score = 26.6 bits (56), Expect = 4.4
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = -3
Query: 445 LEQ-LKLSRHTSNESKKEKIKALKESIDTKLNK-LKDQENEKVELMMEWLNHRLLEVSKF 272
LEQ L L + + ++ + ++S+ T K KD+ N K + E+LN E SKF
Sbjct: 30 LEQGLDLCKPEKVNKQSQRSRQSRQSLFTNTIKPQKDKMNIKTNKIKEFLNDPFTEFSKF 89
Query: 271 ND 266
++
Sbjct: 90 HN 91
>SPBC354.14c |vac8||vacuolar protein Vac8|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 550
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 84 LKCLIRSSVSVIHSLMSLCTSV*ALIDWLVSVKMFCSICRCSILDFSSSTLVFRVNSS 257
L+CLI + + S M+ C +V AL D S + IC I S ++ + NS+
Sbjct: 381 LRCLILDAPVSVQSEMTACLAVLALSDEFKSYLLNFGICNVLIPLTDSMSIEVQGNSA 438
>SPBC106.13 |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 404
Score = 26.2 bits (55), Expect = 5.8
Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -3
Query: 514 EQIELN-EVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLK 344
EQ+ +N + L+ ++++ V+ + L L + S + K EKI +L + T K+K
Sbjct: 21 EQLRINFKHILRHLEHESHVINSTLTTLISQENASMDEKIEKIDSLLSRVSTVKKKMK 78
>SPAC1687.05 |pli1||SUMO E3 ligase Pli1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 727
Score = 26.2 bits (55), Expect = 5.8
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = -3
Query: 559 LLGVLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKEKIKAL 380
L VLK + T L + ++ VF ++ L+T+++Q L + E+ +AL
Sbjct: 10 LPNVLKRLETGLIIPQLKDILRVFGLRLSGTKAELITRIKQ--LIERIAIENNTTSWEAL 67
Query: 379 KESID 365
K++ID
Sbjct: 68 KKAID 72
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -3
Query: 502 LNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNES 404
LNE+ + I K+PVL + + L + +T++ S
Sbjct: 955 LNELLIDDIDGKMPVLFKRFKNLSSAENTTSFS 987
>SPBC11C11.04c |alp1||tubulin specific chaperone cofactor D
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1107
Score = 26.2 bits (55), Expect = 5.8
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = -1
Query: 198 KYYRTSSQKPTSLSKPILKCTRTLRSVLLKQKNGLNILGASSRVTVL 58
KY + +PT L K + K L S LLK KN +G + +TV+
Sbjct: 48 KYLQFCQFQPTLLDKLLSKYVPNLASYLLKVKN----IGKCNSITVI 90
>SPAC167.03c |snu66||U4/U6 x U5 tri-snRNP complex subunit Snu66
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 649
Score = 26.2 bits (55), Expect = 5.8
Identities = 18/88 (20%), Positives = 40/88 (45%)
Frame = -3
Query: 574 ENTSTLLGVLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTSNESKKE 395
E+T T +G ++ T E+ N+ + + + +T EQ + +SKK+
Sbjct: 235 EDTFTTIGPQNSLTVNSTIEKHKSDNKKTFGTLVSFVEPTITGSEQSDYRQIKIKKSKKK 294
Query: 394 KIKALKESIDTKLNKLKDQENEKVELMM 311
K K+ + +L+ + EN+ + ++
Sbjct: 295 KSKSDRRKRLVELDAENENENDPSDFVL 322
>SPBC31E1.05 |gle1||RNA export factor Gle1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 25.8 bits (54), Expect = 7.6
Identities = 27/133 (20%), Positives = 57/133 (42%), Gaps = 7/133 (5%)
Frame = -3
Query: 475 QNKLPVLVTQLEQLKLSRHTSNESKKEKIKALKESIDTKLNKLKD-QENEKVELM----M 311
QN + +T+ +++ + + + + K+ I+ + +LKD +E K ELM
Sbjct: 88 QNLIEQSITESQRIFSEKQRLEQERFNRELLEKKRIEAERQRLKDEEERRKKELMEKEKK 147
Query: 310 EWLNHRLLEVSKFNDDSSELLTLKTRVLELKSKILHLQILQNIFTE--TNQSIKAYTEVH 137
E RL+E K ++ L + + K + + ++ F + S A++ +H
Sbjct: 148 EKERIRLIEEQKHKENEQRRLKQEQIDAKRKEEEAREKRMKETFKDDPEEDSNMAWSIIH 207
Query: 136 KDIKECITETEER 98
K E + E+
Sbjct: 208 KIKTEVVAPISEK 220
>SPBC1677.02 |dpm3||dolichol-phosphate mannosyltransferase subunit
3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 90
Score = 25.8 bits (54), Expect = 7.6
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -3
Query: 208 LHLQILQNIFTETNQSIKAYTEVHKDIKE 122
L + +L N+ T TN +AY ++ KDIKE
Sbjct: 49 LGITLLYNVAT-TNDKPEAYVDLVKDIKE 76
>SPAC13C5.07 |rad32|mre11|Rad32 nuclease|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 649
Score = 25.8 bits (54), Expect = 7.6
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = -3
Query: 514 EQIELNEVFLQKIQNKLPVLVTQLEQL---KLSRHTSNESKKEKIKALKESIDTKLNK 350
E I++N + ++ + N+ + +LE L L N +K+ A+KE ++T+LNK
Sbjct: 430 EDIKINSLRVESLVNEY-LKTNRLECLPEDSLGEAVVNFVEKDDRDAIKECVETQLNK 486
>SPCC1682.04 |cdc31||centrin|Schizosaccharomyces pombe|chr
3|||Manual
Length = 176
Score = 25.8 bits (54), Expect = 7.6
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Frame = -3
Query: 592 KMSTADENTSTLLGVLKHISTELTFEEQIELNEVFLQKIQNKLPVLVTQLEQLKLSRHTS 413
+ S A T LG + E+T E++ ++NE F +K + + +
Sbjct: 9 RRSRASSPTPARLGGYAPLRVEITEEQRQDINEAFKLFDSDKDNAIDYHELRAAMRALGF 68
Query: 412 NESKKEKIKALKESIDTKLNKLKDQENEKVELMMEWLNHR--LLEVSK----FNDDSSEL 251
N K E +K L++ T L Q + V +M E + R L E+ + F+DD +
Sbjct: 69 NAEKSEVLKILRDFDKTGKGYL--QMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGK 126
Query: 250 LTLK 239
++L+
Sbjct: 127 ISLR 130
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,604,957
Number of Sequences: 5004
Number of extensions: 44029
Number of successful extensions: 226
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 208
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 414453330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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