Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12m10
(370 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 24 0.50
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 23 1.1
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 22 2.6
L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein. 21 6.1
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 21 6.1
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 20 8.1
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 20 8.1
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 20 8.1
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 20 8.1
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 20 8.1
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 20 8.1
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 20 8.1
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 20 8.1
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 20 8.1
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 24.2 bits (50), Expect = 0.50
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 210 AVKNIPIPSNKKVRCGKTAGFIGDVYRIIDSISRLIF 320
A K I +NKK G + F VY++ID+I + I+
Sbjct: 541 ATKQIKDEANKK---GVSLRFYNVVYKLIDNIKKEIY 574
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 23.0 bits (47), Expect = 1.1
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = -2
Query: 192 KLQVLKPQEICSKSYFYHWWPPYFLVSEFYSCCYG*GFMCDINVRYNLSYE*CNNT 25
K++ LK I + F+ W PY+++S +Y + D ++ L C N+
Sbjct: 255 KIRTLKMTVIII-AVFFICWTPYYVMSLWYWIDRNSAYKIDQRIQKGLFLFACTNS 309
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.8 bits (44), Expect = 2.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 194 VNEEPGREEYSYSEQQKG*MWKNCRVY 274
+ E RE YS S +++ +KN R Y
Sbjct: 263 LEERTSRERYSRSREREQKSYKNEREY 289
>L10710-1|AAA27730.1| 382|Apis mellifera hyaluronidase protein.
Length = 382
Score = 20.6 bits (41), Expect = 6.1
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = +1
Query: 277 ATCTGSLIQFRDSFLWLF*NE 339
A C + +Q D WLF +E
Sbjct: 231 AQCEATTMQENDKMSWLFESE 251
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 20.6 bits (41), Expect = 6.1
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = -1
Query: 343 VFRSKIAIKMSLEIESMIRY 284
+FR + I+ EI+ ++RY
Sbjct: 463 LFRINLGIECGYEIKKLLRY 482
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 8.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 327 ILERNTIKNKTNKT 368
I ER IKN NKT
Sbjct: 170 IFEREEIKNILNKT 183
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 8.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 327 ILERNTIKNKTNKT 368
I ER IKN NKT
Sbjct: 170 IFEREEIKNILNKT 183
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 8.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 327 ILERNTIKNKTNKT 368
I ER IKN NKT
Sbjct: 170 IFEREEIKNILNKT 183
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 8.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 327 ILERNTIKNKTNKT 368
I ER IKN NKT
Sbjct: 170 IFEREEIKNILNKT 183
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 8.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 327 ILERNTIKNKTNKT 368
I ER IKN NKT
Sbjct: 170 IFEREEIKNILNKT 183
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 20.2 bits (40), Expect = 8.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 327 ILERNTIKNKTNKT 368
I ER IKN NKT
Sbjct: 170 IFEREEIKNILNKT 183
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 20.2 bits (40), Expect = 8.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 327 ILERNTIKNKTNKT 368
I ER IKN NKT
Sbjct: 170 IFEREEIKNILNKT 183
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 20.2 bits (40), Expect = 8.1
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +3
Query: 327 ILERNTIKNKTNKT 368
I ER IKN NKT
Sbjct: 170 IFEREEIKNILNKT 183
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 20.2 bits (40), Expect = 8.1
Identities = 11/24 (45%), Positives = 13/24 (54%), Gaps = 2/24 (8%)
Frame = +3
Query: 84 PTHSNKNKIPKPE--NKAATNDKS 149
P S KNK+ KP + AA KS
Sbjct: 429 PPRSKKNKLKKPRQGDGAAVKRKS 452
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,373
Number of Sequences: 438
Number of extensions: 2133
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used: 8804355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)
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