Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12m08
(766 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 5.4
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 5.4
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 22 5.4
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 7.2
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 7.2
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 7.2
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 7.2
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 7.2
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 7.2
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 9.5
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 21 9.5
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 9.5
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 21 9.5
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 230 YEIHKNYFWKNEVNRAKNYEININQVE 310
Y + NY N N K NIN +E
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 230 YEIHKNYFWKNEVNRAKNYEININQVE 310
Y + NY N N K NIN +E
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 230 YEIHKNYFWKNEVNRAKNYEININQVE 310
Y + NY N N K NIN +E
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 230 YEIHKNYFWKNEVNRAKNYEININQVE 310
Y + NY N N K NIN +E
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 230 YEIHKNYFWKNEVNRAKNYEININQVE 310
Y + NY N N K NIN +E
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 230 YEIHKNYFWKNEVNRAKNYEININQVE 310
Y + NY N N K NIN +E
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 230 YEIHKNYFWKNEVNRAKNYEININQVE 310
Y + NY N N K NIN +E
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +2
Query: 230 YEIHKNYFWKNEVNRAKNYEININQVE 310
Y + NY N N K NIN +E
Sbjct: 91 YSNYNNYNNNNNYNNYKKLYYNINYIE 117
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 22.2 bits (45), Expect = 5.4
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +2
Query: 230 YEIHKNYFWKNEVNRAKNYEININQV 307
Y + NY N+ KNY INI Q+
Sbjct: 91 YSNYNNYNNYNKKLYYKNYIINIEQI 116
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 429 QRYEKLHYIKYKF 391
+RYEKLH K KF
Sbjct: 17 RRYEKLHNEKEKF 29
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 429 QRYEKLHYIKYKF 391
+RYEKLH K KF
Sbjct: 17 RRYEKLHNEKEKF 29
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 429 QRYEKLHYIKYKF 391
+RYEKLH K KF
Sbjct: 17 RRYEKLHNEKEKF 29
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 429 QRYEKLHYIKYKF 391
+RYEKLH K KF
Sbjct: 17 RRYEKLHNEKEKF 29
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 429 QRYEKLHYIKYKF 391
+RYEKLH K KF
Sbjct: 17 RRYEKLHNEKEKF 29
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 429 QRYEKLHYIKYKF 391
+RYEKLH K KF
Sbjct: 17 RRYEKLHNEKEKF 29
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/23 (39%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +2
Query: 230 YEIHKNYFWKNEV-NRAKNYEIN 295
YEI+ NYF+ + V A+N +++
Sbjct: 163 YEIYPNYFFDSSVIEEAQNLKMS 185
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/23 (39%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Frame = +2
Query: 230 YEIHKNYFWKNEV-NRAKNYEIN 295
YEI+ NYF+ + V A+N +++
Sbjct: 163 YEIYPNYFFDSSVIEEAQNLKMS 185
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = +1
Query: 19 YYQGVVQYISNIIYVKLFNVILDETR 96
Y GV Y+S + L+N++ ++ R
Sbjct: 331 YMSGVFYYLSTTVNPLLYNIMSNKFR 356
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 637 PPDGKWLPSPMDFSNA 590
PPD W P + F+NA
Sbjct: 104 PPDKVWKPDIVLFNNA 119
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,342
Number of Sequences: 438
Number of extensions: 4319
Number of successful extensions: 21
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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