Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12m04
(746 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 92 4e-21
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 91 8e-21
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 62 7e-12
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 62 7e-12
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 55 6e-10
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 54 1e-09
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 54 1e-09
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 24 1.3
U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein. 21 9.3
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 21 9.3
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 92.3 bits (219), Expect = 4e-21
Identities = 58/161 (36%), Positives = 86/161 (53%), Gaps = 8/161 (4%)
Frame = -2
Query: 580 KQLVEAVDYCHERGVVHRDIKCENLLM---DHGLNIKLSDFGFARGHMKPKNGVFALSET 410
+Q++E+V +CH GVVHRD+K ENLL+ G +KL+DFG A F
Sbjct: 16 QQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFG---- 71
Query: 409 FCGSYAYASPEILKGVPYRPQDSDVWSMGVVLYAIVYGRLPFDDTNYTQLLKQVQN---K 239
F G+ Y SPE+LK PY + D+W+ GV+LY ++ G PF D + +L Q++
Sbjct: 72 FAGTPGYLSPEVLKKEPY-GKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKTGSYD 130
Query: 238 VSFPREPKVSAECRKLITRILA--PLKMRVKIPQILADPWL 122
P V+ E + LI ++L P K R+ + L PW+
Sbjct: 131 YPSPEWDTVTPEAKNLINQMLTVNPSK-RITASEALKHPWI 170
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 91.5 bits (217), Expect = 8e-21
Identities = 53/155 (34%), Positives = 87/155 (56%), Gaps = 4/155 (2%)
Frame = -2
Query: 676 VYIVMEYAENGSLLDIIRKDQHIDETRGRRWFKQLVEAVDYCHERGVVHRDIKCENLLMD 497
+Y++ME G L ++R H D+ R + +VEA DY H R +++RD+K ENLL+D
Sbjct: 441 LYMLMEACLGGELWTVLRDKGHFDDGTTRFYTACVVEAFDYLHSRNIIYRDLKPENLLLD 500
Query: 496 HGLNIKLSDFGFARGHMKPKNGVFALSETFCGSYAYASPEILKGVPYRPQDSDVWSMGVV 317
+KL DFGFA+ + +G + TFCG+ Y +PE++ + +D WS+GV+
Sbjct: 501 SQGYVKLVDFGFAK---RLDHG--RKTWTFCGTPEYVAPEVILNKGH-DISADYWSLGVL 554
Query: 316 LYAIVYGRLPFDD----TNYTQLLKQVQNKVSFPR 224
++ ++ G PF Y +LK + + + FPR
Sbjct: 555 MFELLTGTPPFTGGDPMKTYNIILKGI-DAIEFPR 588
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 61.7 bits (143), Expect = 7e-12
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Frame = -2
Query: 676 VYIVMEYAENGSLLDIIR-KDQHIDETRGRRWFKQLVEAVDYCHERGVVHRDIKCENLLM 500
V I+ E+ ENGSL +R D + + + + Y E VHRD+ N+L+
Sbjct: 709 VMIITEFMENGSLDTFLRANDGKFQVLQLVGMLRGIASGMQYLAEMNYVHRDLAARNVLV 768
Query: 499 DHGLNIKLSDFGFARGHMKPKNGVFALSETFCGSYAYASPEILKGVPYRPQDSDVWSMGV 320
+ L K++DFG +R G + + +PE + + SDVWSMG+
Sbjct: 769 NAALVCKIADFGLSREIESATEGAYTTRGGKI-PVRWTAPEAIAFRKF-TSASDVWSMGI 826
Query: 319 VLYAIV-YGRLPFDDTNYTQLLKQVQNKVSFP 227
V + ++ YG P+ + + ++K ++ P
Sbjct: 827 VCWEVMSYGERPYWNWSNQDVIKSIEKGYRLP 858
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 61.7 bits (143), Expect = 7e-12
Identities = 32/99 (32%), Positives = 56/99 (56%)
Frame = -2
Query: 580 KQLVEAVDYCHERGVVHRDIKCENLLMDHGLNIKLSDFGFARGHMKPKNGVFALSETFCG 401
K + A+ +CH G+VH D+K +N+LM KL+DFG + P + F G
Sbjct: 162 KSITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAPNE-----IDKFYG 216
Query: 400 SYAYASPEILKGVPYRPQDSDVWSMGVVLYAIVYGRLPF 284
+ Y +PE++K P +D++S+G+V + +++ +LPF
Sbjct: 217 TPGYTAPEVIKQNRPTPA-ADIYSLGIVAWQMLFRKLPF 254
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 55.2 bits (127), Expect = 6e-10
Identities = 28/93 (30%), Positives = 51/93 (54%)
Frame = -2
Query: 676 VYIVMEYAENGSLLDIIRKDQHIDETRGRRWFKQLVEAVDYCHERGVVHRDIKCENLLMD 497
+Y VMEY G L+ I++ E + ++ + + H RG+V+RD+K +N+L+D
Sbjct: 60 LYFVMEYVNGGDLMYQIQQCGKFKEPVAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLD 119
Query: 496 HGLNIKLSDFGFARGHMKPKNGVFALSETFCGS 398
+IK++DFG + + ++TFCG+
Sbjct: 120 QDGHIKIADFGMCKEGISGDK----TTKTFCGT 148
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 54.0 bits (124), Expect = 1e-09
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Frame = -2
Query: 634 DIIRKDQHIDETRGRRWFKQL------VEAVDYCHERGVVHRDIKCENLLMDHGLNIKLS 473
D + +D + G W +++ +E + Y H +G+VHRD+K +N+L+D KL+
Sbjct: 680 DRLSRDLYCGIRAGLSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLT 739
Query: 472 DFGFARGHMKPKNGVFALSETFCGSYAYASPEILKGVPYRPQDSDVWSMGVVLYAIVYG- 296
DFGF + + + G+ + +PE+L G + DV++ G++ + + G
Sbjct: 740 DFGFCITEV-------MMLGSIVGTPVHMAPELLSG--HYDSSVDVYAFGILFWYLCAGH 790
Query: 295 -RLPF 284
RLP+
Sbjct: 791 VRLPY 795
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 54.0 bits (124), Expect = 1e-09
Identities = 34/125 (27%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Frame = -2
Query: 634 DIIRKDQHIDETRGRRWFKQL------VEAVDYCHERGVVHRDIKCENLLMDHGLNIKLS 473
D + +D + G W +++ +E + Y H +G+VHRD+K +N+L+D KL+
Sbjct: 718 DRLSRDLYCGIRAGLSWLERIQIALDVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLT 777
Query: 472 DFGFARGHMKPKNGVFALSETFCGSYAYASPEILKGVPYRPQDSDVWSMGVVLYAIVYG- 296
DFGF + + + G+ + +PE+L G + DV++ G++ + + G
Sbjct: 778 DFGFCITEV-------MMLGSIVGTPVHMAPELLSG--HYDSSVDVYAFGILFWYLCAGH 828
Query: 295 -RLPF 284
RLP+
Sbjct: 829 VRLPY 833
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 24.2 bits (50), Expect = 1.3
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 1/63 (1%)
Frame = -2
Query: 643 SLLDIIRKDQHIDETRGRRWFKQLVEAVDYCHERGVVHRDIKCENLLMD-HGLNIKLSDF 467
SL +I D +D + + K+ ++ +E + D+ +MD H ++KLSDF
Sbjct: 1358 SLSEIDNLDVSLDVSNPKNAGKKKIDVRAKLNEY-LDKADVIVNTPIMDAHFKDVKLSDF 1416
Query: 466 GFA 458
GF+
Sbjct: 1417 GFS 1419
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = -2
Query: 442 PKNGVFALSETFCGSYAYAS 383
PKN +F E F SYA S
Sbjct: 1612 PKNCLFRKPEHFVASYALIS 1631
>U15954-1|AAA67442.1| 53|Apis mellifera abaecin precursor protein.
Length = 53
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/14 (50%), Positives = 10/14 (71%)
Frame = -2
Query: 430 VFALSETFCGSYAY 389
+FAL T C ++AY
Sbjct: 7 IFALLATICAAFAY 20
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.4 bits (43), Expect = 9.3
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 632 HYTKRSAHR*DPW 594
HY K S H+ PW
Sbjct: 323 HYRKPSTHKMAPW 335
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,315
Number of Sequences: 438
Number of extensions: 5220
Number of successful extensions: 35
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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