Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12l17
(597 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC112165-1|AAI12166.1| 1444|Homo sapiens Cdc42 GTPase-activating... 33 1.0
BC112163-1|AAI12164.1| 1444|Homo sapiens Cdc42 GTPase-activating... 33 1.0
AB033030-1|BAA86518.1| 1445|Homo sapiens KIAA1204 protein protein. 33 1.0
Z82208-1|CAI42768.1| 1711|Homo sapiens BCL6 co-repressor-like 1 ... 31 2.3
AL136450-3|CAI42884.1| 1711|Homo sapiens BCL6 co-repressor-like ... 31 2.3
AK074089-1|BAB84915.1| 1696|Homo sapiens FLJ00160 protein protein. 31 2.3
BC132801-1|AAI32802.1| 338|Homo sapiens solute carrier family 2... 29 9.5
BC132799-1|AAI32800.1| 338|Homo sapiens solute carrier family 2... 29 9.5
BC015013-1|AAH15013.1| 155|Homo sapiens SLC25A37 protein protein. 29 9.5
AY032628-1|AAK38154.1| 155|Homo sapiens mitochondria solute car... 29 9.5
AK223194-1|BAD96914.1| 155|Homo sapiens Mitochondrial solute ca... 29 9.5
AF223466-1|AAF64141.1| 347|Homo sapiens HT015 protein protein. 29 9.5
>BC112165-1|AAI12166.1| 1444|Homo sapiens Cdc42 GTPase-activating
protein protein.
Length = 1444
Score = 32.7 bits (71), Expect = 1.0
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -2
Query: 446 DRKGNCSCGGFPTVTPDPGSLPLLSQTPSLVVKCDQEGDNT 324
D C C G PT++P+PGS LLS T VV+C + T
Sbjct: 1276 DATAPCMCEG-PTLSPEPGSSNLLS-TQDAVVQCRKRMSET 1314
>BC112163-1|AAI12164.1| 1444|Homo sapiens Cdc42 GTPase-activating
protein protein.
Length = 1444
Score = 32.7 bits (71), Expect = 1.0
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -2
Query: 446 DRKGNCSCGGFPTVTPDPGSLPLLSQTPSLVVKCDQEGDNT 324
D C C G PT++P+PGS LLS T VV+C + T
Sbjct: 1276 DATAPCMCEG-PTLSPEPGSSNLLS-TQDAVVQCRKRMSET 1314
>AB033030-1|BAA86518.1| 1445|Homo sapiens KIAA1204 protein protein.
Length = 1445
Score = 32.7 bits (71), Expect = 1.0
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = -2
Query: 446 DRKGNCSCGGFPTVTPDPGSLPLLSQTPSLVVKCDQEGDNT 324
D C C G PT++P+PGS LLS T VV+C + T
Sbjct: 1277 DATAPCMCEG-PTLSPEPGSSNLLS-TQDAVVQCRKRMSET 1315
>Z82208-1|CAI42768.1| 1711|Homo sapiens BCL6 co-repressor-like 1
protein.
Length = 1711
Score = 31.5 bits (68), Expect = 2.3
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Frame = -2
Query: 344 DQEGDNTCKILCNALATATKAKGPEILCSRLKDVNELKLSAFYKTCDKPWSYANMTAEAP 165
+QE + K + A K + L RL++ N L + D P + E P
Sbjct: 1348 EQEDEQRRKGRADLKARKQKTSSSQSLEHRLRNRNLLLPNKVQGISDSPNGFLPNNLEEP 1407
Query: 164 LCCENSQVKVCSSVVTLK--STVQPEAKTTIIY 72
C ENS+ K +TV EAK ++Y
Sbjct: 1408 ACLENSEKPSGKRKCKTKHMATVSEEAKDVVLY 1440
>AL136450-3|CAI42884.1| 1711|Homo sapiens BCL6 co-repressor-like 1
protein.
Length = 1711
Score = 31.5 bits (68), Expect = 2.3
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Frame = -2
Query: 344 DQEGDNTCKILCNALATATKAKGPEILCSRLKDVNELKLSAFYKTCDKPWSYANMTAEAP 165
+QE + K + A K + L RL++ N L + D P + E P
Sbjct: 1348 EQEDEQRRKGRADLKARKQKTSSSQSLEHRLRNRNLLLPNKVQGISDSPNGFLPNNLEEP 1407
Query: 164 LCCENSQVKVCSSVVTLK--STVQPEAKTTIIY 72
C ENS+ K +TV EAK ++Y
Sbjct: 1408 ACLENSEKPSGKRKCKTKHMATVSEEAKDVVLY 1440
>AK074089-1|BAB84915.1| 1696|Homo sapiens FLJ00160 protein protein.
Length = 1696
Score = 31.5 bits (68), Expect = 2.3
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Frame = -2
Query: 344 DQEGDNTCKILCNALATATKAKGPEILCSRLKDVNELKLSAFYKTCDKPWSYANMTAEAP 165
+QE + K + A K + L RL++ N L + D P + E P
Sbjct: 1333 EQEDEQRRKGRADLKARKQKTSSSQSLEHRLRNRNLLLPNKVQGISDSPNGFLPNNLEEP 1392
Query: 164 LCCENSQVKVCSSVVTLK--STVQPEAKTTIIY 72
C ENS+ K +TV EAK ++Y
Sbjct: 1393 ACLENSEKPSGKRKCKTKHMATVSEEAKDVVLY 1425
>BC132801-1|AAI32802.1| 338|Homo sapiens solute carrier family 25,
member 37 protein.
Length = 338
Score = 29.5 bits (63), Expect = 9.5
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -1
Query: 198 MELRKHDCRSPTLLRKFPSESLFVGGNTKINSATGSKDYHNLLT 67
MELR S + R+ +S GG ATGS+DY NL T
Sbjct: 1 MELRSGSVGSQAVARRMDGDSRDGGGG---KDATGSEDYENLPT 41
>BC132799-1|AAI32800.1| 338|Homo sapiens solute carrier family 25,
member 37 protein.
Length = 338
Score = 29.5 bits (63), Expect = 9.5
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -1
Query: 198 MELRKHDCRSPTLLRKFPSESLFVGGNTKINSATGSKDYHNLLT 67
MELR S + R+ +S GG ATGS+DY NL T
Sbjct: 1 MELRSGSVGSQAVARRMDGDSRDGGGG---KDATGSEDYENLPT 41
>BC015013-1|AAH15013.1| 155|Homo sapiens SLC25A37 protein protein.
Length = 155
Score = 29.5 bits (63), Expect = 9.5
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -1
Query: 198 MELRKHDCRSPTLLRKFPSESLFVGGNTKINSATGSKDYHNLLT 67
MELR S + R+ +S GG ATGS+DY NL T
Sbjct: 1 MELRSGSVGSQAVARRMDGDSRDGGGG---KDATGSEDYENLPT 41
>AY032628-1|AAK38154.1| 155|Homo sapiens mitochondria solute
carrier protein protein.
Length = 155
Score = 29.5 bits (63), Expect = 9.5
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -1
Query: 198 MELRKHDCRSPTLLRKFPSESLFVGGNTKINSATGSKDYHNLLT 67
MELR S + R+ +S GG ATGS+DY NL T
Sbjct: 1 MELRSGSVGSQAVARRMDGDSRDGGGG---KDATGSEDYENLPT 41
>AK223194-1|BAD96914.1| 155|Homo sapiens Mitochondrial solute
carrier variant protein.
Length = 155
Score = 29.5 bits (63), Expect = 9.5
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -1
Query: 198 MELRKHDCRSPTLLRKFPSESLFVGGNTKINSATGSKDYHNLLT 67
MELR S + R+ +S GG ATGS+DY NL T
Sbjct: 1 MELRSGSVGSQAVARRMDGDSRDGGGG---KDATGSEDYENLPT 41
>AF223466-1|AAF64141.1| 347|Homo sapiens HT015 protein protein.
Length = 347
Score = 29.5 bits (63), Expect = 9.5
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = -1
Query: 198 MELRKHDCRSPTLLRKFPSESLFVGGNTKINSATGSKDYHNLLT 67
MELR S + R+ +S GG ATGS+DY NL T
Sbjct: 1 MELRSGSVGSQAVARRMDGDSRDGGGG---KDATGSEDYENLPT 41
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,925,412
Number of Sequences: 237096
Number of extensions: 1690078
Number of successful extensions: 3602
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3602
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6324506272
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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