Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12l16
         (158 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S79979-1|AAB47039.2|   97|Homo sapiens ribosomal protein L37 pro...    75   3e-14
L11567-1|AAA62148.1|   97|Homo sapiens ribosomal protein L37 pro...    75   3e-14
D23661-1|BAA04888.1|   97|Homo sapiens ribosomal protein L37 pro...    75   3e-14
CR456890-1|CAG33171.1|   97|Homo sapiens RPL37 protein.                75   3e-14
BC084576-1|AAH84576.1|   97|Homo sapiens RPL37 protein protein.        75   3e-14
BC079477-1|AAH79477.1|   97|Homo sapiens ribosomal protein L37 p...    75   3e-14
AB061834-1|BAB79472.1|   97|Homo sapiens ribosomal protein L37 p...    75   3e-14

>S79979-1|AAB47039.2|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = -2

Query: 130 MTKGTSSFGKRRNKTHTLCXXCGXSSYHIQXSKCAQCXYPAAK 2
           MTKGTSSFGKRRNKTHTLC  CG  +YH+Q S C +C YPA +
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKR 43


>L11567-1|AAA62148.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = -2

Query: 130 MTKGTSSFGKRRNKTHTLCXXCGXSSYHIQXSKCAQCXYPAAK 2
           MTKGTSSFGKRRNKTHTLC  CG  +YH+Q S C +C YPA +
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKR 43


>D23661-1|BAA04888.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = -2

Query: 130 MTKGTSSFGKRRNKTHTLCXXCGXSSYHIQXSKCAQCXYPAAK 2
           MTKGTSSFGKRRNKTHTLC  CG  +YH+Q S C +C YPA +
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKR 43


>CR456890-1|CAG33171.1|   97|Homo sapiens RPL37 protein.
          Length = 97

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = -2

Query: 130 MTKGTSSFGKRRNKTHTLCXXCGXSSYHIQXSKCAQCXYPAAK 2
           MTKGTSSFGKRRNKTHTLC  CG  +YH+Q S C +C YPA +
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKR 43


>BC084576-1|AAH84576.1|   97|Homo sapiens RPL37 protein protein.
          Length = 97

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = -2

Query: 130 MTKGTSSFGKRRNKTHTLCXXCGXSSYHIQXSKCAQCXYPAAK 2
           MTKGTSSFGKRRNKTHTLC  CG  +YH+Q S C +C YPA +
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKR 43


>BC079477-1|AAH79477.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = -2

Query: 130 MTKGTSSFGKRRNKTHTLCXXCGXSSYHIQXSKCAQCXYPAAK 2
           MTKGTSSFGKRRNKTHTLC  CG  +YH+Q S C +C YPA +
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKR 43


>AB061834-1|BAB79472.1|   97|Homo sapiens ribosomal protein L37
           protein.
          Length = 97

 Score = 75.4 bits (177), Expect = 3e-14
 Identities = 30/43 (69%), Positives = 34/43 (79%)
 Frame = -2

Query: 130 MTKGTSSFGKRRNKTHTLCXXCGXSSYHIQXSKCAQCXYPAAK 2
           MTKGTSSFGKRRNKTHTLC  CG  +YH+Q S C +C YPA +
Sbjct: 1   MTKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKR 43


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,205,165
Number of Sequences: 237096
Number of extensions: 161412
Number of successful extensions: 249
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 76,859,062
effective HSP length: 32
effective length of database: 69,271,990
effective search space used: 1385439800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)