Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12l14
(290 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X81900-1|CAA57489.1| 70|Homo sapiens NADH oxidoreductase subun... 39 0.003
U54993-1|AAD00084.1| 70|Homo sapiens mitochondrial complex I h... 39 0.003
CR456889-1|CAG33170.1| 70|Homo sapiens ZNF183 protein. 39 0.003
BC000266-1|AAH00266.1| 70|Homo sapiens NADH dehydrogenase (ubi... 39 0.003
BC115376-1|AAI15377.1| 954|Homo sapiens C2orf16 protein protein. 29 3.6
AL834384-1|CAD39047.1| 845|Homo sapiens hypothetical protein pr... 29 3.6
AC074091-7|AAX93198.1| 939|Homo sapiens unknown protein. 29 3.6
AK131539-1|BAD18675.1| 1086|Homo sapiens protein ( Homo sapiens ... 28 6.3
L13738-1|AAA53570.2| 1036|Homo sapiens activated p21cdc42Hs kina... 27 8.3
>X81900-1|CAA57489.1| 70|Homo sapiens NADH oxidoreductase subunit
MWFE protein.
Length = 70
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = -1
Query: 221 MWYEILPTVAIITASIGLPGWGLWWCHNYFLGNHYRRSLTDRWSRALYQRDMRLTG--NP 48
MW+EILP ++++ + +PG + H + G +R + +L +RD R++G
Sbjct: 1 MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISGVDRY 60
Query: 47 YEVNGLEAI 21
Y GLE I
Sbjct: 61 YVSKGLENI 69
>U54993-1|AAD00084.1| 70|Homo sapiens mitochondrial complex I
hMWFE subunit protein.
Length = 70
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = -1
Query: 221 MWYEILPTVAIITASIGLPGWGLWWCHNYFLGNHYRRSLTDRWSRALYQRDMRLTG--NP 48
MW+EILP ++++ + +PG + H + G +R + +L +RD R++G
Sbjct: 1 MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISGVDRY 60
Query: 47 YEVNGLEAI 21
Y GLE I
Sbjct: 61 YVSKGLENI 69
>CR456889-1|CAG33170.1| 70|Homo sapiens ZNF183 protein.
Length = 70
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = -1
Query: 221 MWYEILPTVAIITASIGLPGWGLWWCHNYFLGNHYRRSLTDRWSRALYQRDMRLTG--NP 48
MW+EILP ++++ + +PG + H + G +R + +L +RD R++G
Sbjct: 1 MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISGVDRY 60
Query: 47 YEVNGLEAI 21
Y GLE I
Sbjct: 61 YVSKGLENI 69
>BC000266-1|AAH00266.1| 70|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 1, 7.5kDa protein.
Length = 70
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/69 (30%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = -1
Query: 221 MWYEILPTVAIITASIGLPGWGLWWCHNYFLGNHYRRSLTDRWSRALYQRDMRLTG--NP 48
MW+EILP ++++ + +PG + H + G +R + +L +RD R++G
Sbjct: 1 MWFEILPGLSVMGVCLLIPGLATAYIHRFTNGGKEKRVAHFGYHWSLMERDRRISGVDRY 60
Query: 47 YEVNGLEAI 21
Y GLE I
Sbjct: 61 YVSKGLENI 69
>BC115376-1|AAI15377.1| 954|Homo sapiens C2orf16 protein protein.
Length = 954
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 14 YPG*LPSHSLHKDYQ*ASYPSGTTH 88
+PG PSHSL +D++ + GTTH
Sbjct: 915 FPGERPSHSLSRDFKNQTTLLGTTH 939
>AL834384-1|CAD39047.1| 845|Homo sapiens hypothetical protein
protein.
Length = 845
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 14 YPG*LPSHSLHKDYQ*ASYPSGTTH 88
+PG PSHSL +D++ + GTTH
Sbjct: 806 FPGERPSHSLSRDFKNQTTLLGTTH 830
>AC074091-7|AAX93198.1| 939|Homo sapiens unknown protein.
Length = 939
Score = 28.7 bits (61), Expect = 3.6
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 14 YPG*LPSHSLHKDYQ*ASYPSGTTH 88
+PG PSHSL +D++ + GTTH
Sbjct: 900 FPGERPSHSLSRDFKNQTTLLGTTH 924
>AK131539-1|BAD18675.1| 1086|Homo sapiens protein ( Homo sapiens
cDNA FLJ16772 fis, clone BRAWH3043827, highly similar
to Homo sapiens activated p21cdc42Hs kinase (ACK1). ).
Length = 1086
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 18 RDSFQAIHFIRITSKPHIPLVQRTTPSISKRASIMIA*KII-MTPPQSPTR 167
R S + I +P +P ++ PS+++ A M A ++ TPPQSPTR
Sbjct: 640 RGSGAEVTLIDFGEEPVVPALRPCAPSLAQLA--MDACSLLDETPPQSPTR 688
>L13738-1|AAA53570.2| 1036|Homo sapiens activated p21cdc42Hs kinase
protein.
Length = 1036
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 18 RDSFQAIHFIRITSKPHIPLVQRTTPSISKRASIMIA*KII-MTPPQSPTR 167
R S + I +P +P ++ PS+++ A M A ++ TPPQSPTR
Sbjct: 562 RGSGAEVTLIDFGEEPVVPALRPCPPSLAQLA--MDACSLLDETPPQSPTR 610
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,476,232
Number of Sequences: 237096
Number of extensions: 697001
Number of successful extensions: 1227
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1227
length of database: 76,859,062
effective HSP length: 73
effective length of database: 59,551,054
effective search space used: 1369674242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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