Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12l04
         (281 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024391-1|ABC86453.1|  144|Drosophila melanogaster IP05345p pro...    28   2.0  
BT029055-1|ABJ16988.1|   92|Drosophila melanogaster IP06635p pro...    27   3.6  
AY113570-1|AAM29575.1|   90|Drosophila melanogaster RH16169p pro...    26   6.2  
AE014296-2694|AAF49494.1|   90|Drosophila melanogaster CG13061-P...    26   6.2  
BT030147-1|ABN49286.1|   99|Drosophila melanogaster IP17609p pro...    26   8.2  
BT021350-1|AAX33498.2|  155|Drosophila melanogaster LP19160p pro...    26   8.2  
AE014296-2688|AAF49499.1|  155|Drosophila melanogaster CG13044-P...    26   8.2  

>BT024391-1|ABC86453.1|  144|Drosophila melanogaster IP05345p
           protein.
          Length = 144

 Score = 27.9 bits (59), Expect = 2.0
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = -3

Query: 279 SVTLRRTKQTIKMFKYLIFVALLAFASAKP 190
           S T  + ++++ MFK ++  ALLA A A+P
Sbjct: 4   STTQTKKQKSLNMFKLVVLSALLAVAVARP 33


>BT029055-1|ABJ16988.1|   92|Drosophila melanogaster IP06635p
           protein.
          Length = 92

 Score = 27.1 bits (57), Expect = 3.6
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = -3

Query: 243 MFKYLIFVALLAFASAKPXLV 181
           M+K+L+  AL+A ++AKP +V
Sbjct: 7   MYKFLVLAALIACSAAKPGVV 27


>AY113570-1|AAM29575.1|   90|Drosophila melanogaster RH16169p
           protein.
          Length = 90

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -3

Query: 243 MFKYLIFVALLAFASAKP 190
           MFK  +FVALL+ A+A P
Sbjct: 1   MFKLCVFVALLSLAAAAP 18


>AE014296-2694|AAF49494.1|   90|Drosophila melanogaster CG13061-PA
           protein.
          Length = 90

 Score = 26.2 bits (55), Expect = 6.2
 Identities = 11/18 (61%), Positives = 14/18 (77%)
 Frame = -3

Query: 243 MFKYLIFVALLAFASAKP 190
           MFK  +FVALL+ A+A P
Sbjct: 1   MFKLCVFVALLSLAAAAP 18


>BT030147-1|ABN49286.1|   99|Drosophila melanogaster IP17609p
           protein.
          Length = 99

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = -3

Query: 240 FKYLIFVALLAFASAK 193
           F  ++FVALLAFASA+
Sbjct: 3   FTIIVFVALLAFASAQ 18


>BT021350-1|AAX33498.2|  155|Drosophila melanogaster LP19160p
           protein.
          Length = 155

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 243 MFKYLIFVALLAFASAKP 190
           MFK  +  ALLA A+AKP
Sbjct: 1   MFKLFVLAALLAVAAAKP 18


>AE014296-2688|AAF49499.1|  155|Drosophila melanogaster CG13044-PA
           protein.
          Length = 155

 Score = 25.8 bits (54), Expect = 8.2
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -3

Query: 243 MFKYLIFVALLAFASAKP 190
           MFK  +  ALLA A+AKP
Sbjct: 1   MFKLFVLAALLAVAAAKP 18


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,881,521
Number of Sequences: 53049
Number of extensions: 77536
Number of successful extensions: 231
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 444545640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)