Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12k18
(848 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M84739-1|AAA51916.1| 417|Homo sapiens calreticulin protein. 110 7e-24
M32294-1|AAA36582.1| 417|Homo sapiens protein ( Human Ro ribonu... 110 7e-24
CR457070-1|CAG33351.1| 417|Homo sapiens CALR protein. 110 7e-24
BT007448-1|AAP36116.1| 417|Homo sapiens calreticulin protein. 110 7e-24
BC020493-1|AAH20493.1| 417|Homo sapiens calreticulin protein. 110 7e-24
BC007911-1|AAH07911.1| 417|Homo sapiens calreticulin protein. 110 7e-24
BC002500-1|AAH02500.1| 417|Homo sapiens calreticulin protein. 110 7e-24
AY047586-1|AAL13126.1| 417|Homo sapiens calreticulin protein. 110 7e-24
AK223060-1|BAD96780.1| 406|Homo sapiens calreticulin precursor ... 110 7e-24
AD000092-6|AAB51176.1| 417|Homo sapiens calreticulin protein. 110 7e-24
BC014595-1|AAH14595.1| 384|Homo sapiens calreticulin 3 protein. 64 5e-10
AK058084-1|BAB71655.1| 384|Homo sapiens protein ( Homo sapiens ... 64 5e-10
M94859-1|AAA21749.1| 592|Homo sapiens calnexin protein. 57 9e-08
L18887-1|AAA21013.1| 592|Homo sapiens calnexin protein. 57 9e-08
L10284-1|AAA36125.1| 592|Homo sapiens calnexin protein. 57 9e-08
BC042843-1|AAH42843.1| 592|Homo sapiens calnexin protein. 57 9e-08
BC003552-1|AAH03552.1| 592|Homo sapiens calnexin protein. 57 9e-08
AJ271880-1|CAB72137.1| 592|Homo sapiens calnexin protein. 57 9e-08
D86322-1|BAA22590.1| 610|Homo sapiens calmegin protein. 54 5e-07
BC028357-1|AAH28357.1| 610|Homo sapiens calmegin protein. 54 5e-07
M98452-1|AAA35696.1| 356|Homo sapiens calnexin protein. 54 9e-07
AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens ... 35 0.43
AK129990-1|BAC85269.1| 327|Homo sapiens protein ( Homo sapiens ... 32 3.0
>M84739-1|AAA51916.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 110 bits (264), Expect = 7e-24
Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDP 597
P+QIDNP YKG W+HPEIDNPEY+PD ++Y D +GLDLWQVKSGTIFD+FLIT+D
Sbjct: 277 PRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDE 336
Query: 596 AAAKERG-EVIKKRQEGEKKM 537
A A+E G E + EK+M
Sbjct: 337 AYAEEFGNETWGVTKAAEKQM 357
Score = 49.2 bits (112), Expect = 2e-05
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNPDYKGVW 781
D+EMDGEWEPP+I NP+YKG W
Sbjct: 254 DEEMDGEWEPPVIQNPEYKGEW 275
Score = 39.9 bits (89), Expect = 0.011
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3
Query: 840 EMDGEWEPPMIDNPDYKGVW 781
E GEW+P IDNPDYKG W
Sbjct: 270 EYKGEWKPRQIDNPDYKGTW 289
>M32294-1|AAA36582.1| 417|Homo sapiens protein ( Human Ro
ribonucleoprotein autoantigen (Ro/SS-A), complete cds.
).
Length = 417
Score = 110 bits (264), Expect = 7e-24
Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDP 597
P+QIDNP YKG W+HPEIDNPEY+PD ++Y D +GLDLWQVKSGTIFD+FLIT+D
Sbjct: 277 PRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDE 336
Query: 596 AAAKERG-EVIKKRQEGEKKM 537
A A+E G E + EK+M
Sbjct: 337 AYAEEFGNETWGVTKAAEKQM 357
Score = 49.2 bits (112), Expect = 2e-05
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNPDYKGVW 781
D+EMDGEWEPP+I NP+YKG W
Sbjct: 254 DEEMDGEWEPPVIQNPEYKGEW 275
Score = 39.9 bits (89), Expect = 0.011
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3
Query: 840 EMDGEWEPPMIDNPDYKGVW 781
E GEW+P IDNPDYKG W
Sbjct: 270 EYKGEWKPRQIDNPDYKGTW 289
>CR457070-1|CAG33351.1| 417|Homo sapiens CALR protein.
Length = 417
Score = 110 bits (264), Expect = 7e-24
Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDP 597
P+QIDNP YKG W+HPEIDNPEY+PD ++Y D +GLDLWQVKSGTIFD+FLIT+D
Sbjct: 277 PRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDE 336
Query: 596 AAAKERG-EVIKKRQEGEKKM 537
A A+E G E + EK+M
Sbjct: 337 AYAEEFGNETWGVTKAAEKQM 357
Score = 49.2 bits (112), Expect = 2e-05
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNPDYKGVW 781
D+EMDGEWEPP+I NP+YKG W
Sbjct: 254 DEEMDGEWEPPVIQNPEYKGEW 275
Score = 39.9 bits (89), Expect = 0.011
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3
Query: 840 EMDGEWEPPMIDNPDYKGVW 781
E GEW+P IDNPDYKG W
Sbjct: 270 EYKGEWKPRQIDNPDYKGTW 289
>BT007448-1|AAP36116.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 110 bits (264), Expect = 7e-24
Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDP 597
P+QIDNP YKG W+HPEIDNPEY+PD ++Y D +GLDLWQVKSGTIFD+FLIT+D
Sbjct: 277 PRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDE 336
Query: 596 AAAKERG-EVIKKRQEGEKKM 537
A A+E G E + EK+M
Sbjct: 337 AYAEEFGNETWGVTKAAEKQM 357
Score = 49.2 bits (112), Expect = 2e-05
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNPDYKGVW 781
D+EMDGEWEPP+I NP+YKG W
Sbjct: 254 DEEMDGEWEPPVIQNPEYKGEW 275
Score = 39.9 bits (89), Expect = 0.011
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3
Query: 840 EMDGEWEPPMIDNPDYKGVW 781
E GEW+P IDNPDYKG W
Sbjct: 270 EYKGEWKPRQIDNPDYKGTW 289
>BC020493-1|AAH20493.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 110 bits (264), Expect = 7e-24
Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDP 597
P+QIDNP YKG W+HPEIDNPEY+PD ++Y D +GLDLWQVKSGTIFD+FLIT+D
Sbjct: 277 PRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDE 336
Query: 596 AAAKERG-EVIKKRQEGEKKM 537
A A+E G E + EK+M
Sbjct: 337 AYAEEFGNETWGVTKAAEKQM 357
Score = 49.2 bits (112), Expect = 2e-05
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNPDYKGVW 781
D+EMDGEWEPP+I NP+YKG W
Sbjct: 254 DEEMDGEWEPPVIQNPEYKGEW 275
Score = 39.9 bits (89), Expect = 0.011
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3
Query: 840 EMDGEWEPPMIDNPDYKGVW 781
E GEW+P IDNPDYKG W
Sbjct: 270 EYKGEWKPRQIDNPDYKGTW 289
>BC007911-1|AAH07911.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 110 bits (264), Expect = 7e-24
Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDP 597
P+QIDNP YKG W+HPEIDNPEY+PD ++Y D +GLDLWQVKSGTIFD+FLIT+D
Sbjct: 277 PRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDE 336
Query: 596 AAAKERG-EVIKKRQEGEKKM 537
A A+E G E + EK+M
Sbjct: 337 AYAEEFGNETWGVTKAAEKQM 357
Score = 49.2 bits (112), Expect = 2e-05
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNPDYKGVW 781
D+EMDGEWEPP+I NP+YKG W
Sbjct: 254 DEEMDGEWEPPVIQNPEYKGEW 275
Score = 39.9 bits (89), Expect = 0.011
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3
Query: 840 EMDGEWEPPMIDNPDYKGVW 781
E GEW+P IDNPDYKG W
Sbjct: 270 EYKGEWKPRQIDNPDYKGTW 289
>BC002500-1|AAH02500.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 110 bits (264), Expect = 7e-24
Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDP 597
P+QIDNP YKG W+HPEIDNPEY+PD ++Y D +GLDLWQVKSGTIFD+FLIT+D
Sbjct: 277 PRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDE 336
Query: 596 AAAKERG-EVIKKRQEGEKKM 537
A A+E G E + EK+M
Sbjct: 337 AYAEEFGNETWGVTKAAEKQM 357
Score = 49.2 bits (112), Expect = 2e-05
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNPDYKGVW 781
D+EMDGEWEPP+I NP+YKG W
Sbjct: 254 DEEMDGEWEPPVIQNPEYKGEW 275
Score = 39.9 bits (89), Expect = 0.011
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3
Query: 840 EMDGEWEPPMIDNPDYKGVW 781
E GEW+P IDNPDYKG W
Sbjct: 270 EYKGEWKPRQIDNPDYKGTW 289
>AY047586-1|AAL13126.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 110 bits (264), Expect = 7e-24
Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDP 597
P+QIDNP YKG W+HPEIDNPEY+PD ++Y D +GLDLWQVKSGTIFD+FLIT+D
Sbjct: 277 PRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDE 336
Query: 596 AAAKERG-EVIKKRQEGEKKM 537
A A+E G E + EK+M
Sbjct: 337 AYAEEFGNETWGVTKAAEKQM 357
Score = 49.2 bits (112), Expect = 2e-05
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNPDYKGVW 781
D+EMDGEWEPP+I NP+YKG W
Sbjct: 254 DEEMDGEWEPPVIQNPEYKGEW 275
Score = 39.9 bits (89), Expect = 0.011
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3
Query: 840 EMDGEWEPPMIDNPDYKGVW 781
E GEW+P IDNPDYKG W
Sbjct: 270 EYKGEWKPRQIDNPDYKGTW 289
>AK223060-1|BAD96780.1| 406|Homo sapiens calreticulin precursor
variant protein.
Length = 406
Score = 110 bits (264), Expect = 7e-24
Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDP 597
P+QIDNP YKG W+HPEIDNPEY+PD ++Y D +GLDLWQVKSGTIFD+FLIT+D
Sbjct: 266 PRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDE 325
Query: 596 AAAKERG-EVIKKRQEGEKKM 537
A A+E G E + EK+M
Sbjct: 326 AYAEEFGNETWGVTKAAEKQM 346
Score = 49.2 bits (112), Expect = 2e-05
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNPDYKGVW 781
D+EMDGEWEPP+I NP+YKG W
Sbjct: 243 DEEMDGEWEPPVIQNPEYKGEW 264
Score = 39.9 bits (89), Expect = 0.011
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3
Query: 840 EMDGEWEPPMIDNPDYKGVW 781
E GEW+P IDNPDYKG W
Sbjct: 259 EYKGEWKPRQIDNPDYKGTW 278
>AD000092-6|AAB51176.1| 417|Homo sapiens calreticulin protein.
Length = 417
Score = 110 bits (264), Expect = 7e-24
Identities = 50/81 (61%), Positives = 61/81 (75%), Gaps = 1/81 (1%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDP 597
P+QIDNP YKG W+HPEIDNPEY+PD ++Y D +GLDLWQVKSGTIFD+FLIT+D
Sbjct: 277 PRQIDNPDYKGTWIHPEIDNPEYSPDPSIYAYDNFGVLGLDLWQVKSGTIFDNFLITNDE 336
Query: 596 AAAKERG-EVIKKRQEGEKKM 537
A A+E G E + EK+M
Sbjct: 337 AYAEEFGNETWGVTKAAEKQM 357
Score = 49.2 bits (112), Expect = 2e-05
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNPDYKGVW 781
D+EMDGEWEPP+I NP+YKG W
Sbjct: 254 DEEMDGEWEPPVIQNPEYKGEW 275
Score = 39.9 bits (89), Expect = 0.011
Identities = 14/20 (70%), Positives = 15/20 (75%)
Frame = -3
Query: 840 EMDGEWEPPMIDNPDYKGVW 781
E GEW+P IDNPDYKG W
Sbjct: 270 EYKGEWKPRQIDNPDYKGTW 289
>BC014595-1|AAH14595.1| 384|Homo sapiens calreticulin 3 protein.
Length = 384
Score = 64.5 bits (150), Expect = 5e-10
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = -1
Query: 752 YKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKERGE 573
+K W+H ++ N +Y +L + + I A+GL+LWQV+SGTIFD+FLITDD A G+
Sbjct: 271 HKDVWLHRKMKNTDYLTQYDLSEFENIGAIGLELWQVRSGTIFDNFLITDDEEYADNFGK 330
Query: 572 VIKKRQEGEKK 540
+G ++
Sbjct: 331 ATWGETKGPER 341
>AK058084-1|BAB71655.1| 384|Homo sapiens protein ( Homo sapiens
cDNA FLJ25355 fis, clone TST01593. ).
Length = 384
Score = 64.5 bits (150), Expect = 5e-10
Identities = 29/71 (40%), Positives = 45/71 (63%)
Frame = -1
Query: 752 YKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDPAAAKERGE 573
+K W+H ++ N +Y +L + + I A+GL+LWQV+SGTIFD+FLITDD A G+
Sbjct: 271 HKDVWLHRKMKNTDYLTQYDLSEFENIGAIGLELWQVRSGTIFDNFLITDDEEYADNFGK 330
Query: 572 VIKKRQEGEKK 540
+G ++
Sbjct: 331 ATWGETKGPER 341
>M94859-1|AAA21749.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 56.8 bits (131), Expect = 9e-08
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDD 600
P IDNP+Y+G W +I NP++ D ++ A+GL+LW + S FD+F+I D
Sbjct: 385 PPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICAD 443
Score = 39.9 bits (89), Expect = 0.011
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVW 781
G+W+PPMIDNP Y+G+W
Sbjct: 381 GKWKPPMIDNPSYQGIW 397
Score = 34.3 bits (75), Expect = 0.57
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVWGTKTD**PSLQRPMGPSRNRQP 715
G W+ P+IDNP+YKG W PS Q P + P
Sbjct: 367 GVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNP 405
Score = 31.9 bits (69), Expect = 3.0
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNP 799
D++MDGEWE P I NP
Sbjct: 343 DEDMDGEWEAPQIANP 358
>L18887-1|AAA21013.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 56.8 bits (131), Expect = 9e-08
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDD 600
P IDNP+Y+G W +I NP++ D ++ A+GL+LW + S FD+F+I D
Sbjct: 385 PPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICAD 443
Score = 39.9 bits (89), Expect = 0.011
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVW 781
G+W+PPMIDNP Y+G+W
Sbjct: 381 GKWKPPMIDNPSYQGIW 397
Score = 34.3 bits (75), Expect = 0.57
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVWGTKTD**PSLQRPMGPSRNRQP 715
G W+ P+IDNP+YKG W PS Q P + P
Sbjct: 367 GVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNP 405
Score = 31.9 bits (69), Expect = 3.0
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNP 799
D++MDGEWE P I NP
Sbjct: 343 DEDMDGEWEAPQIANP 358
>L10284-1|AAA36125.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 56.8 bits (131), Expect = 9e-08
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDD 600
P IDNP+Y+G W +I NP++ D ++ A+GL+LW + S FD+F+I D
Sbjct: 385 PPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICAD 443
Score = 39.9 bits (89), Expect = 0.011
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVW 781
G+W+PPMIDNP Y+G+W
Sbjct: 381 GKWKPPMIDNPSYQGIW 397
Score = 34.3 bits (75), Expect = 0.57
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVWGTKTD**PSLQRPMGPSRNRQP 715
G W+ P+IDNP+YKG W PS Q P + P
Sbjct: 367 GVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNP 405
Score = 31.9 bits (69), Expect = 3.0
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNP 799
D++MDGEWE P I NP
Sbjct: 343 DEDMDGEWEAPQIANP 358
>BC042843-1|AAH42843.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 56.8 bits (131), Expect = 9e-08
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDD 600
P IDNP+Y+G W +I NP++ D ++ A+GL+LW + S FD+F+I D
Sbjct: 385 PPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICAD 443
Score = 39.9 bits (89), Expect = 0.011
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVW 781
G+W+PPMIDNP Y+G+W
Sbjct: 381 GKWKPPMIDNPSYQGIW 397
Score = 34.3 bits (75), Expect = 0.57
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVWGTKTD**PSLQRPMGPSRNRQP 715
G W+ P+IDNP+YKG W PS Q P + P
Sbjct: 367 GVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNP 405
Score = 31.9 bits (69), Expect = 3.0
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNP 799
D++MDGEWE P I NP
Sbjct: 343 DEDMDGEWEAPQIANP 358
>BC003552-1|AAH03552.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 56.8 bits (131), Expect = 9e-08
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDD 600
P IDNP+Y+G W +I NP++ D ++ A+GL+LW + S FD+F+I D
Sbjct: 385 PPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICAD 443
Score = 39.9 bits (89), Expect = 0.011
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVW 781
G+W+PPMIDNP Y+G+W
Sbjct: 381 GKWKPPMIDNPSYQGIW 397
Score = 34.3 bits (75), Expect = 0.57
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVWGTKTD**PSLQRPMGPSRNRQP 715
G W+ P+IDNP+YKG W PS Q P + P
Sbjct: 367 GVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNP 405
Score = 31.9 bits (69), Expect = 3.0
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNP 799
D++MDGEWE P I NP
Sbjct: 343 DEDMDGEWEAPQIANP 358
>AJ271880-1|CAB72137.1| 592|Homo sapiens calnexin protein.
Length = 592
Score = 56.8 bits (131), Expect = 9e-08
Identities = 23/59 (38%), Positives = 35/59 (59%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDD 600
P IDNP+Y+G W +I NP++ D ++ A+GL+LW + S FD+F+I D
Sbjct: 385 PPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTSDIFFDNFIICAD 443
Score = 39.9 bits (89), Expect = 0.011
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVW 781
G+W+PPMIDNP Y+G+W
Sbjct: 381 GKWKPPMIDNPSYQGIW 397
Score = 34.3 bits (75), Expect = 0.57
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVWGTKTD**PSLQRPMGPSRNRQP 715
G W+ P+IDNP+YKG W PS Q P + P
Sbjct: 367 GVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNP 405
Score = 31.9 bits (69), Expect = 3.0
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNP 799
D++MDGEWE P I NP
Sbjct: 343 DEDMDGEWEAPQIANP 358
>D86322-1|BAA22590.1| 610|Homo sapiens calmegin protein.
Length = 610
Score = 54.4 bits (125), Expect = 5e-07
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDP 597
P +DNP Y+G W +I NP+Y D + + A+GL+LW + S FD+F+I +
Sbjct: 374 PPLVDNPNYQGIWSPRKIPNPDYFEDDHPFLLTSFSALGLELWSMTSDIYFDNFIICSEK 433
Query: 596 AAA 588
A
Sbjct: 434 EVA 436
Score = 43.2 bits (97), Expect = 0.001
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVW 781
GEW+PPMIDNP YKGVW
Sbjct: 356 GEWKPPMIDNPKYKGVW 372
Score = 37.5 bits (83), Expect = 0.061
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVWGTK 772
G W PP++DNP+Y+G+W +
Sbjct: 370 GVWRPPLVDNPNYQGIWSPR 389
>BC028357-1|AAH28357.1| 610|Homo sapiens calmegin protein.
Length = 610
Score = 54.4 bits (125), Expect = 5e-07
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDDP 597
P +DNP Y+G W +I NP+Y D + + A+GL+LW + S FD+F+I +
Sbjct: 374 PPLVDNPNYQGIWSPRKIPNPDYFEDDHPFLLTSFSALGLELWSMTSDIYFDNFIICSEK 433
Query: 596 AAA 588
A
Sbjct: 434 EVA 436
Score = 43.2 bits (97), Expect = 0.001
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVW 781
GEW+PPMIDNP YKGVW
Sbjct: 356 GEWKPPMIDNPKYKGVW 372
Score = 37.5 bits (83), Expect = 0.061
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVWGTK 772
G W PP++DNP+Y+G+W +
Sbjct: 370 GVWRPPLVDNPNYQGIWSPR 389
>M98452-1|AAA35696.1| 356|Homo sapiens calnexin protein.
Length = 356
Score = 53.6 bits (123), Expect = 9e-07
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = -1
Query: 776 PKQIDNPAYKGPWVHPEIDNPEYTPDSNLYKRDEICAVGLDLWQVKSGTIFDDFLITDD 600
P IDNP+Y+G W +I NP++ D ++ A+GL+LW + FD+F+I D
Sbjct: 149 PPMIDNPSYQGIWKPRKIPNPDFFEDLEPFRMTPFSAIGLELWSMTLTFFFDNFIICAD 207
Score = 39.9 bits (89), Expect = 0.011
Identities = 12/17 (70%), Positives = 16/17 (94%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVW 781
G+W+PPMIDNP Y+G+W
Sbjct: 145 GKWKPPMIDNPSYQGIW 161
Score = 34.3 bits (75), Expect = 0.57
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = -3
Query: 831 GEWEPPMIDNPDYKGVWGTKTD**PSLQRPMGPSRNRQP 715
G W+ P+IDNP+YKG W PS Q P + P
Sbjct: 131 GVWQRPVIDNPNYKGKWKPPMIDNPSYQGIWKPRKIPNP 169
Score = 31.9 bits (69), Expect = 3.0
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNP 799
D++MDGEWE P I NP
Sbjct: 107 DEDMDGEWEAPQIANP 122
>AK123631-1|BAC85667.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ41637 fis, clone FEBRA1000030, weakly similar
to T-CELL RECEPTOR BETA CHAIN ANA 11. ).
Length = 207
Score = 34.7 bits (76), Expect = 0.43
Identities = 22/88 (25%), Positives = 34/88 (38%), Gaps = 4/88 (4%)
Frame = +2
Query: 17 LYNNNHNHTKH*GYYIECYCTVKLYIHVPAHGARPITKH*----IITYINSERNPHLHGH 184
L+ + H HT + I Y + H H + H ++T + H H H
Sbjct: 56 LHTHTHTHTLSLYWLISLYIHTHTHTHTHTHAVLYLPTHTHTHAVLTLAYLPIHTHTHTH 115
Query: 185 QYETTDTYLLTHNMSLRIGKIRAKHTHS 268
+ + T L TH +SL HTH+
Sbjct: 116 THTLSCTSLYTHTLSLHWLTCLYTHTHA 143
>AK129990-1|BAC85269.1| 327|Homo sapiens protein ( Homo sapiens
cDNA FLJ26480 fis, clone KDN05071, highly similar to
Calnexin precursor. ).
Length = 327
Score = 31.9 bits (69), Expect = 3.0
Identities = 11/16 (68%), Positives = 13/16 (81%)
Frame = -3
Query: 846 DDEMDGEWEPPMIDNP 799
D++MDGEWE P I NP
Sbjct: 279 DEDMDGEWEAPQIANP 294
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,718,414
Number of Sequences: 237096
Number of extensions: 2258968
Number of successful extensions: 4844
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 4458
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4839
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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