Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12k10
(471 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07548-1|AAA02852.1| 408|Homo sapiens aminoacylase-1 protein. 143 2e-34
D16307-1|BAA03814.1| 408|Homo sapiens 45kDa protein protein. 143 2e-34
D14524-1|BAA03397.1| 408|Homo sapiens aminoacylase-1 protein. 143 2e-34
BC014112-1|AAH14112.1| 408|Homo sapiens aminoacylase 1 protein. 143 2e-34
BC003023-1|AAH03023.1| 408|Homo sapiens aminoacylase 1 protein. 143 2e-34
BC000545-1|AAH00545.1| 408|Homo sapiens aminoacylase 1 protein. 143 2e-34
BC063477-1|AAH63477.1| 502|Homo sapiens hypothetical protein FL... 32 1.2
BC125099-1|AAI25100.1| 781|Homo sapiens zinc finger protein 616... 30 4.6
BC033199-1|AAH33199.1| 781|Homo sapiens zinc finger protein 616... 30 4.6
BC039170-1|AAH39170.1| 502|Homo sapiens hypothetical protein FL... 29 8.1
>L07548-1|AAA02852.1| 408|Homo sapiens aminoacylase-1 protein.
Length = 408
Score = 143 bits (347), Expect = 2e-34
Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 2/155 (1%)
Frame = -3
Query: 460 NTVSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCTEAGRGVTYE 281
+ S NL + +GG+ NV+P +A+FD R+A +VD K FE +Q WC AG GVT E
Sbjct: 247 SVTSVNLTKL--EGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEGVTLE 304
Query: 280 FEQK--DPYTTPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLRELGIPALGF 107
F QK P TPT DD+N +W AF + +++ ++++P+ TD+RY+R +G+PALGF
Sbjct: 305 FAQKWMHPQVTPT--DDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPALGF 362
Query: 106 SPIHNTTPALHEHNEHLGLDVFINGIAVYQSMIRA 2
SP++ T LH+H+E L VF+ G+ +Y ++ A
Sbjct: 363 SPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPA 397
>D16307-1|BAA03814.1| 408|Homo sapiens 45kDa protein protein.
Length = 408
Score = 143 bits (347), Expect = 2e-34
Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 2/155 (1%)
Frame = -3
Query: 460 NTVSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCTEAGRGVTYE 281
+ S NL + +GG+ NV+P +A+FD R+A +VD K FE +Q WC AG GVT E
Sbjct: 247 SVTSVNLTKL--EGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEGVTLE 304
Query: 280 FEQK--DPYTTPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLRELGIPALGF 107
F QK P TPT DD+N +W AF + +++ ++++P+ TD+RY+R +G+PALGF
Sbjct: 305 FAQKWMHPQVTPT--DDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPALGF 362
Query: 106 SPIHNTTPALHEHNEHLGLDVFINGIAVYQSMIRA 2
SP++ T LH+H+E L VF+ G+ +Y ++ A
Sbjct: 363 SPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPA 397
>D14524-1|BAA03397.1| 408|Homo sapiens aminoacylase-1 protein.
Length = 408
Score = 143 bits (347), Expect = 2e-34
Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 2/155 (1%)
Frame = -3
Query: 460 NTVSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCTEAGRGVTYE 281
+ S NL + +GG+ NV+P +A+FD R+A +VD K FE +Q WC AG GVT E
Sbjct: 247 SVTSVNLTKL--EGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEGVTLE 304
Query: 280 FEQK--DPYTTPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLRELGIPALGF 107
F QK P TPT DD+N +W AF + +++ ++++P+ TD+RY+R +G+PALGF
Sbjct: 305 FAQKWMHPQVTPT--DDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPALGF 362
Query: 106 SPIHNTTPALHEHNEHLGLDVFINGIAVYQSMIRA 2
SP++ T LH+H+E L VF+ G+ +Y ++ A
Sbjct: 363 SPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPA 397
>BC014112-1|AAH14112.1| 408|Homo sapiens aminoacylase 1 protein.
Length = 408
Score = 143 bits (347), Expect = 2e-34
Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 2/155 (1%)
Frame = -3
Query: 460 NTVSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCTEAGRGVTYE 281
+ S NL + +GG+ NV+P +A+FD R+A +VD K FE +Q WC AG GVT E
Sbjct: 247 SVTSVNLTKL--EGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEGVTLE 304
Query: 280 FEQK--DPYTTPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLRELGIPALGF 107
F QK P TPT DD+N +W AF + +++ ++++P+ TD+RY+R +G+PALGF
Sbjct: 305 FAQKWMHPQVTPT--DDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPALGF 362
Query: 106 SPIHNTTPALHEHNEHLGLDVFINGIAVYQSMIRA 2
SP++ T LH+H+E L VF+ G+ +Y ++ A
Sbjct: 363 SPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPA 397
>BC003023-1|AAH03023.1| 408|Homo sapiens aminoacylase 1 protein.
Length = 408
Score = 143 bits (347), Expect = 2e-34
Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 2/155 (1%)
Frame = -3
Query: 460 NTVSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCTEAGRGVTYE 281
+ S NL + +GG+ NV+P +A+FD R+A +VD K FE +Q WC AG GVT E
Sbjct: 247 SVTSVNLTKL--EGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEGVTLE 304
Query: 280 FEQK--DPYTTPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLRELGIPALGF 107
F QK P TPT DD+N +W AF + +++ ++++P+ TD+RY+R +G+PALGF
Sbjct: 305 FAQKWMHPQVTPT--DDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPALGF 362
Query: 106 SPIHNTTPALHEHNEHLGLDVFINGIAVYQSMIRA 2
SP++ T LH+H+E L VF+ G+ +Y ++ A
Sbjct: 363 SPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPA 397
>BC000545-1|AAH00545.1| 408|Homo sapiens aminoacylase 1 protein.
Length = 408
Score = 143 bits (347), Expect = 2e-34
Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 2/155 (1%)
Frame = -3
Query: 460 NTVSTNLFHIISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCTEAGRGVTYE 281
+ S NL + +GG+ NV+P +A+FD R+A +VD K FE +Q WC AG GVT E
Sbjct: 247 SVTSVNLTKL--EGGVAYNVIPATMSASFDFRVAPDVDFKAFEEQLQSWCQAAGEGVTLE 304
Query: 280 FEQK--DPYTTPTQLDDANIYWKAFKQTAEELGMSIKPQTFTGGTDSRYLRELGIPALGF 107
F QK P TPT DD+N +W AF + +++ ++++P+ TD+RY+R +G+PALGF
Sbjct: 305 FAQKWMHPQVTPT--DDSNPWWAAFSRVCKDMNLTLEPEIMPAATDNRYIRAVGVPALGF 362
Query: 106 SPIHNTTPALHEHNEHLGLDVFINGIAVYQSMIRA 2
SP++ T LH+H+E L VF+ G+ +Y ++ A
Sbjct: 363 SPMNRTPVLLHDHDERLHEAVFLRGVDIYTRLLPA 397
>BC063477-1|AAH63477.1| 502|Homo sapiens hypothetical protein
FLJ32569 protein.
Length = 502
Score = 31.9 bits (69), Expect = 1.2
Identities = 30/136 (22%), Positives = 54/136 (39%), Gaps = 6/136 (4%)
Frame = -3
Query: 430 ISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCTEAGRGVTYEFEQKDPYTTP 251
I + G++ NV+P A + RI ++E + + + R + DP
Sbjct: 342 IFKAGVKFNVIPPVAQATVNFRIHPGQTVQEVLELTKNIVAD-NRVQFHVLSAFDPLPVS 400
Query: 250 TQLDDANIYWKAFKQTAEELGMSIK---PQTFTGGTDSRYLRELGIPALGFSPIH---NT 89
DD + ++ +QT + + + P T G TDSR+ L F PI+
Sbjct: 401 PS-DDKALGYQLLRQTVQSVFPEVNITAPVTSIGNTDSRFFTNLTTGIYRFYPIYIQPED 459
Query: 88 TPALHEHNEHLGLDVF 41
+H NE + + +
Sbjct: 460 FKRIHGVNEKISVQAY 475
>BC125099-1|AAI25100.1| 781|Homo sapiens zinc finger protein 616
protein.
Length = 781
Score = 29.9 bits (64), Expect = 4.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -3
Query: 427 SQGGIQNNVVPEQFTANFDLRIA 359
SQG ++NN + Q T+NF+ R+A
Sbjct: 127 SQGDVENNHIENQLTSNFESRLA 149
>BC033199-1|AAH33199.1| 781|Homo sapiens zinc finger protein 616
protein.
Length = 781
Score = 29.9 bits (64), Expect = 4.6
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = -3
Query: 427 SQGGIQNNVVPEQFTANFDLRIA 359
SQG ++NN + Q T+NF+ R+A
Sbjct: 127 SQGDVENNHIENQLTSNFESRLA 149
>BC039170-1|AAH39170.1| 502|Homo sapiens hypothetical protein
FLJ32569 protein.
Length = 502
Score = 29.1 bits (62), Expect = 8.1
Identities = 29/136 (21%), Positives = 53/136 (38%), Gaps = 6/136 (4%)
Frame = -3
Query: 430 ISQGGIQNNVVPEQFTANFDLRIALNVDLKEFENMIQKWCTEAGRGVTYEFEQKDPYTTP 251
I + ++ NV+P A + RI ++E + + + R + DP
Sbjct: 342 IFKARVKFNVIPPVAQATVNFRIHPGQTVQEVLELTKNTVAD-NRVQFHVLSAFDPLPVS 400
Query: 250 TQLDDANIYWKAFKQTAEELGMSIK---PQTFTGGTDSRYLRELGIPALGFSPIH---NT 89
DD + ++ +QT + + + P T G TDSR+ L F PI+
Sbjct: 401 PS-DDKALGYQLLRQTVQSVFPEVNITAPVTSIGNTDSRFFTNLTTGIYRFYPIYIQPED 459
Query: 88 TPALHEHNEHLGLDVF 41
+H NE + + +
Sbjct: 460 FKRIHGVNEKISVQAY 475
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,736,998
Number of Sequences: 237096
Number of extensions: 1399324
Number of successful extensions: 3038
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3038
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4099895856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -