Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12k05
(767 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0352 + 2799748-2799865,2800368-2800412,2800890-2801121,280... 142 2e-34
09_06_0350 + 22461592-22461935,22462788-22462867,22463171-224632... 110 1e-24
04_03_0214 + 12713865-12713973,12715780-12716011,12716556-127166... 104 9e-23
06_01_0199 + 1538124-1538485,1538997-1539076,1539198-1539357,153... 103 1e-22
11_01_0520 + 4078075-4078198,4078726-4078957,4079068-4079147,407... 100 1e-21
03_01_0109 - 863381-863575,863749-863795,863893-863980,864078-86... 99 4e-21
10_08_0835 - 20916364-20916462,20916503-20916549,20916750-209168... 96 2e-20
04_03_0215 + 12722394-12722581,12722992-12723071,12723315-127235... 83 3e-16
02_01_0118 + 870911-871203,872559-872679,872975-873092,873218-87... 75 5e-14
11_01_0519 + 4066776-4066892,4067042-4067099,4067322-4067608,406... 71 1e-12
06_03_0618 + 22798419-22798588,22798672-22798771,22798891-227989... 68 1e-11
09_02_0572 - 10796997-10797152,10797259-10797412,10798023-107980... 64 9e-11
04_04_1598 + 34698260-34698316,34698438-34699544 53 3e-07
10_08_0505 + 18384392-18384454,18384593-18384679,18385878-183864... 46 4e-05
04_04_0605 + 26549904-26551939,26553931-26554180,26554764-265548... 36 0.027
11_04_0145 + 14082864-14082946,14083060-14083267,14083383-140835... 34 0.14
04_04_1139 + 31173271-31173462,31173928-31174087,31174318-311744... 33 0.19
11_04_0128 + 13752727-13752809,13752922-13753129,13753238-137533... 33 0.25
03_02_0501 - 8920458-8920646,8920918-8921024,8921136-8921352,892... 32 0.44
02_05_0093 + 25753021-25753061,25753159-25753402,25753843-257539... 32 0.58
04_03_0100 + 11232801-11232889,11233417-11233624,11233907-112341... 31 1.0
05_06_0257 + 26723858-26724049,26724073-26724230,26724886-267250... 30 2.3
04_03_0745 + 19244089-19244521,19244638-19244723,19245090-192452... 30 2.3
10_08_0832 - 20905189-20905347,20905793-20905877,20906385-20906458 29 3.1
02_04_0478 - 23261273-23261530,23262243-23262312,23263304-23263953 29 3.1
12_02_1230 - 27204881-27205765 29 4.1
04_03_0746 + 19247529-19247723,19247808-19248000,19248145-192482... 29 5.4
08_02_1003 + 23457092-23457403,23457498-23457591,23457695-234578... 28 7.1
01_07_0056 - 40787723-40788124,40788236-40788430,40788914-40789309 28 7.1
05_06_0223 - 26525618-26526112,26526203-26526370,26526649-265274... 28 9.4
>01_01_0352 +
2799748-2799865,2800368-2800412,2800890-2801121,
2801242-2801321,2801417-2801570,2801655-2801733,
2801900-2801984,2802121-2802167,2802301-2802471
Length = 336
Score = 142 bits (345), Expect = 2e-34
Identities = 81/222 (36%), Positives = 129/222 (58%), Gaps = 5/222 (2%)
Frame = -3
Query: 750 SLKSVKEFADNVLHKYPKINLLVNNAGIMYGKYELTTDGFESQLAVNHLGHFYLTHLLLP 571
SLKSV+ FAD +N+L+NNAG+M+ + L+ DG E Q A NHLGHF LT+LLL
Sbjct: 110 SLKSVRAFADQFNSMNLPLNILINNAGVMFCPFGLSEDGVEMQFATNHLGHFLLTNLLLD 169
Query: 570 ALK-KAGNLCEPSRFINVTSCGH---YPGQIYFDDINMKEHYDETAAYAQSKLAQLMMAR 403
+K A + R +N++S H YP I FD +N ++ YD+ AY QSKLA ++ A+
Sbjct: 170 NMKATAKSTGIEGRIVNLSSVAHLHTYPKGIEFDKLNDEKTYDDKMAYGQSKLANILHAK 229
Query: 402 YINKIMEENNIPVKGYSVHPGIVNTDLFDGTVF-KRVFPWAMKLFFKTPEKGAVSILFAC 226
+++ ++E + VHPG++ T+L + F RV +A + +K+ +GA + +
Sbjct: 230 ELSRRLKEEGANITINCVHPGLIMTNLMRHSFFLMRVLQFATYILWKSVPQGAATTCYVG 289
Query: 225 FNEELQKRGGLYISNCIEGISNRFSKNLEYQKILXELSCQLV 100
N +L+ G Y ++C ++RF++N K L E S +L+
Sbjct: 290 LNPQLKGVTGQYFADCNVEKTSRFARNDALAKQLWEFSEKLI 331
>09_06_0350 +
22461592-22461935,22462788-22462867,22463171-22463273,
22463423-22463501,22464208-22464292,22464639-22464685,
22465217-22465375
Length = 298
Score = 110 bits (264), Expect = 1e-24
Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 2/219 (0%)
Frame = -3
Query: 750 SLKSVKEFADNVLHKYPKINLLVNNAGIMYGKYELTTDGFESQLAVNHLGHFYLTHLLLP 571
S+ SV+ FA + K +N+L+NNAG+M + L+ DG E Q A NH+GHF LTHLLL
Sbjct: 93 SMDSVRAFASDFAAKGLPLNILINNAGVMATPFSLSKDGIELQFATNHVGHFLLTHLLLE 152
Query: 570 ALKKAGNLCE-PSRFINVTSCGHYPGQIYFDDINMKEHYDETAAYAQSKLAQLMMARYIN 394
+KK R +NV+S GH Y+ AY QSKLA ++ A +
Sbjct: 153 TMKKTSRESNVEGRIVNVSSEGH--------------RYNSIGAYGQSKLANILHANELA 198
Query: 393 KIMEENNIPVKGYSVHPGIVNTDLF-DGTVFKRVFPWAMKLFFKTPEKGAVSILFACFNE 217
+ ++ + + S+HPG + T+L ++ + KL K ++GA + + +
Sbjct: 199 RRFKDEGVNITANSLHPGSIITNLLRHHSILDVLHRTLGKLVLKNAQQGAATTCYVALHP 258
Query: 216 ELQKRGGLYISNCIEGISNRFSKNLEYQKILXELSCQLV 100
+++ G Y S+ ++ ++E K L E S +L+
Sbjct: 259 QVKGVSGKYFSDSNVNEASEKGNDMELAKRLWEYSIELI 297
>04_03_0214 +
12713865-12713973,12715780-12716011,12716556-12716635,
12716930-12717083,12717213-12717291,12717654-12717738,
12718420-12718466,12720123-12720281
Length = 314
Score = 104 bits (249), Expect = 9e-23
Identities = 64/196 (32%), Positives = 101/196 (51%), Gaps = 5/196 (2%)
Frame = -3
Query: 750 SLKSVKEFADNVLHKYPKINLLVNNAGIMYGKYELTTDGFESQLAVNHLGHFYLTHLLLP 571
S+ SV+ FA+ +N+L+NNAG+ + ++L+ D E A NH+GHF LT LL+
Sbjct: 92 SMSSVRRFAEIFKALNLPLNILINNAGVCFVPFKLSEDDIELHFATNHIGHFLLTDLLIE 151
Query: 570 ALK-KAGNLCEPSRFINVTSCGH---YPGQIYFDDINMKEHYDETAAYAQSKLAQLMMAR 403
+K A + R + V S + YPG I FD IN + Y+ AY QSKLA ++ +
Sbjct: 152 KMKVTAIESGKEGRVVIVASVSYSLSYPGGICFDKINDESGYNRFLAYGQSKLANILHSN 211
Query: 402 YINKIMEENNIPVKGYSVHPGIVNTD-LFDGTVFKRVFPWAMKLFFKTPEKGAVSILFAC 226
++ ++E + V S+HPG V T+ L K F K E+GA ++ +
Sbjct: 212 LLSSHLKEQDAKVIVNSLHPGAVATNILHHWCPLYGAIRAIGKYFVKGVEQGAATVCYVA 271
Query: 225 FNEELQKRGGLYISNC 178
+ ++ G Y S+C
Sbjct: 272 LHPQVAGVTGKYFSDC 287
>06_01_0199 +
1538124-1538485,1538997-1539076,1539198-1539357,
1539497-1539578,1540080-1540167,1540256-1540302,
1540623-1540865
Length = 353
Score = 103 bits (248), Expect = 1e-22
Identities = 75/214 (35%), Positives = 105/214 (49%), Gaps = 10/214 (4%)
Frame = -3
Query: 750 SLKSVKEFADNVLHKYPKINLLVNNAGIMYGKYELTTDGFESQLAVNHLGHFYLTHLLLP 571
SL SV+ FA L +NLL+NNAG ++ L+ DG E A N+LGHF LT LL+
Sbjct: 99 SLASVRRFAARFLALGLPLNLLINNAGKFADRFALSDDGVEMTFATNYLGHFLLTKLLME 158
Query: 570 AL-KKAGNLCEPSRFINVTSCGH--YPGQI---YFDDINMKE-HYDETAAYAQSKLAQLM 412
+ + A R +NV+S H + G Y D + ++ YD T AYA SKLA ++
Sbjct: 159 KMAETAAATGVEGRIVNVSSTIHSWFAGDDAVGYIDAVTRRKIPYDPTRAYALSKLANVL 218
Query: 411 MARYINKIMEENNIPVKGYSVHPGIVNTDLF---DGTVFKRVFPWAMKLFFKTPEKGAVS 241
R + ++E V VHPGIV T L DG V VF A KL KT + A +
Sbjct: 219 HTRALADRLKEMKANVTANCVHPGIVRTRLIRERDGLVTNTVFFLASKL-LKTIPQAAAT 277
Query: 240 ILFACFNEELQKRGGLYISNCIEGISNRFSKNLE 139
+ + + G Y ++C E +R N +
Sbjct: 278 TCYVAVHPAVAGVSGKYFADCNEASPSRLGSNAD 311
>11_01_0520 +
4078075-4078198,4078726-4078957,4079068-4079147,
4079256-4079409,4079438-4079494,4080733-4080811,
4081013-4081094,4081168-4081223,4081310-4081492
Length = 348
Score = 100 bits (240), Expect = 1e-21
Identities = 76/247 (30%), Positives = 116/247 (46%), Gaps = 27/247 (10%)
Frame = -3
Query: 750 SLKSVKEFADNVLHKYPKINLLVNNAGIMYGKYELTTDGFESQLAVNHLGHFYLTHLLLP 571
SL SV+ FA + Y +N+L+NNAG+M + L+ DG E Q A NH+GHF LT+LLL
Sbjct: 97 SLDSVRSFAKSFNSSYRHLNVLINNAGVMSCPFGLSKDGIELQFATNHVGHFLLTNLLLD 156
Query: 570 ALK-KAGNLCEPSRFINVTSCGH--YPGQIY-FDDINMKE-------------------H 460
+K A R INV+S H G + D +N K
Sbjct: 157 KMKATAKETGLQGRIINVSSISHRGSDGSCFDLDKLNDKSKLTQYSKLNQRSYYFIKLGR 216
Query: 459 YDETAAYAQSKLAQLMMARYINKIMEENNIPVKGYSVHPGIVNTDL----FDGTVFKRVF 292
Y AY SKLA ++ A +++ +E + S+HPG++ T+L ++ +F
Sbjct: 217 YRPFKAYGHSKLANILHANELSRRFQEEGCNLTANSLHPGVIATNLPRHILTNSLIISIF 276
Query: 291 PWAMKLFFKTPEKGAVSILFACFNEELQKRGGLYISNCIEGISNRFSKNLEYQKILXELS 112
MK F K+ +GA + + + L+ G Y ++C E +++ E K L E S
Sbjct: 277 S-VMKPFLKSIPQGAATNCYLALHPGLKDVSGKYFADCNEATPTAVARDAELAKKLWEFS 335
Query: 111 CQLVGID 91
+L D
Sbjct: 336 EELTSGD 342
>03_01_0109 -
863381-863575,863749-863795,863893-863980,864078-864159,
864264-864420,864501-864583,864724-864955,865032-865146
Length = 332
Score = 98.7 bits (235), Expect = 4e-21
Identities = 77/223 (34%), Positives = 111/223 (49%), Gaps = 10/223 (4%)
Frame = -3
Query: 750 SLKSVKEFADNVLHKYPKINLLVNNAG-IMYGKYELTTDGFESQLAVNHLGHFYLTHLLL 574
SL SV+ FAD L ++LL+NNAG +G+ L+ DG E A N+LGHF LT LLL
Sbjct: 94 SLASVRAFADRFLSLGLPLHLLINNAGKFSHGQLALSEDGVEMTFATNYLGHFLLTKLLL 153
Query: 573 PAL-KKAGNLCEPSRFINVTSCGH--YPGQ--IYFDDINMKE-HYDETAAYAQSKLAQLM 412
+ + A R +NV+S H + G Y D + ++ YD T AYA SKLA ++
Sbjct: 154 GRMAETAAATGVQGRIVNVSSSVHSWFAGDWAEYLDLVTRRKIAYDATQAYAVSKLANVL 213
Query: 411 MARYINKIMEENNIPVKGYSVHPGIVNTDL---FDGTVFKRVFPWAMKLFFKTPEKGAVS 241
+ + ++E V VHPGIV T L DG V VF KL KT + A +
Sbjct: 214 HTKELAVRLKEMGANVTVNCVHPGIVRTRLNRDRDGLVTDLVFLLLSKL-LKTIPQAAAT 272
Query: 240 ILFACFNEELQKRGGLYISNCIEGISNRFSKNLEYQKILXELS 112
+ + L G Y ++C E + + + N + L ++S
Sbjct: 273 TCYVAAHPRLAGVSGRYFADCNEALPSPAATNRHEAERLWQIS 315
>10_08_0835 -
20916364-20916462,20916503-20916549,20916750-20916864,
20916933-20917011,20917365-20917518,20917660-20917739,
20918170-20918401,20918755-20918860
Length = 303
Score = 96.3 bits (229), Expect = 2e-20
Identities = 55/158 (34%), Positives = 85/158 (53%), Gaps = 14/158 (8%)
Frame = -3
Query: 750 SLKSVKEFADNVLHKYPKINLLVNNAGIMYGKYELTTDGFESQLAVNHLGHFYLTHLLLP 571
S+ SV+ FA +N+L+NNAGIM + DG E Q A NH+GHF LT+LLL
Sbjct: 91 SMDSVRRFATEFEALNLPLNILINNAGIMTRNCTRSIDGLELQFATNHIGHFLLTNLLLE 150
Query: 570 ALKKAGNLC-EPSRFINVTSCGH---YPGQIYFDDINMKEHYDETAAYAQSKLAQLMMAR 403
+K+ + R +NV+S H YP I FD + + AY QSKLA ++ +
Sbjct: 151 NMKRTSSKTGVEGRIVNVSSSAHFVTYPKGICFDKVKEPSRFISLIAYGQSKLANILHST 210
Query: 402 YINKIM----------EENNIPVKGYSVHPGIVNTDLF 319
+++++ +E+ + + +VHPG+V T+LF
Sbjct: 211 ELSRVLKNNRETVEYEQEDGVNISANAVHPGVVTTNLF 248
>04_03_0215 +
12722394-12722581,12722992-12723071,12723315-12723532,
12724084-12724168,12724679-12724725,12725378-12725536
Length = 258
Score = 82.6 bits (195), Expect = 3e-16
Identities = 65/221 (29%), Positives = 102/221 (46%), Gaps = 5/221 (2%)
Frame = -3
Query: 747 LKSVKEFADNVLHKYPKINLLVNNAGIMYGKYELTTDGFESQLAVNHLGHFYLTHLLLPA 568
+ SV+ FA+N +N+LVNNAGI + ++L+ +G E + NHLGHF LT LLL
Sbjct: 42 MSSVRRFAENFNALNLPLNILVNNAGIAFVPFKLSEEGIELHFSTNHLGHFLLTDLLLEK 101
Query: 567 LK-KAGNLCEPSRFINVTSCGH---YPGQIYFDDINMKEHYDETAAYAQSKLAQLMMARY 400
+K A R + V S + Y I FD IN DE+ Y ++ L Y
Sbjct: 102 MKVTAIESGIEGRVVIVASNSYKHPYREGIRFDKIN-----DESGYYFLTQRILLFTFVY 156
Query: 399 INKIMEENNIPVKGYSVHPGIVNTDLFDGTVF-KRVFPWAMKLFFKTPEKGAVSILFACF 223
+ +E + V S+HPG V T++ F + K F K E+GA ++ +
Sbjct: 157 LFNRSKEQDAKVTVNSLHPGAVVTNIMRHWYFVNGMLSTLGKFFVKGVEQGAATVCYVAL 216
Query: 222 NEELQKRGGLYISNCIEGISNRFSKNLEYQKILXELSCQLV 100
+ ++ G Y +C + ++ K L + S L+
Sbjct: 217 HPQVAGVTGKYFVDCNVTELKSHALDMGLAKRLWDFSLNLI 257
>02_01_0118 +
870911-871203,872559-872679,872975-873092,873218-873354,
873583-873684,873862-873954,875047-875119,875213-875478
Length = 400
Score = 75.4 bits (177), Expect = 5e-14
Identities = 71/237 (29%), Positives = 115/237 (48%), Gaps = 18/237 (7%)
Frame = -3
Query: 750 SLKSVKEFADNVLHKYPKINLLVNNAGIM-YGKYE-LTTDGFESQLAVNHLGHFYLTHLL 577
SL SV +FAD + +++L+NNAGI G+ + + DG+E + VNHL L LL
Sbjct: 146 SLDSVVKFADAWNARMAPLHVLINNAGIFSIGEPQRFSKDGYEEHMQVNHLAPALLAVLL 205
Query: 576 LPALKKAGNLCEPSRFINVTSCGHYPGQIYFDDINM---KEHYDETAAYAQSKLAQLMMA 406
LP+L + PSR +NV S H G + +D+N+ K + Y+ SKLAQ+ +
Sbjct: 206 LPSLLRG----SPSRIVNVNSVMHTVGFVDAEDMNLTSGKRKFTSLMGYSNSKLAQIKFS 261
Query: 405 RYIN-KIMEENNIPVKGYSVHPGIVNTDLFDGTVFKRVFPW-AMKLFFKTPEKGAVSILF 232
++ +I E I V PGIV+T++ V + + F ++G+ S LF
Sbjct: 262 SMLHRRIPAEAEINV--ICASPGIVHTNVARDLPKLVVAAYHLIPYFIFDAQEGSRSTLF 319
Query: 231 ACFNE------ELQKRGGLYISNCIEGISNRF-----SKNLEYQKILXELSCQLVGI 94
A + E+ K + CI N S NLE +++ E + +++G+
Sbjct: 320 AASDPQVPDYCEMLKSEDWPVCACISYDCNPMNASEESHNLETSQLVWEKTLEMIGL 376
>11_01_0519 + 4066776-4066892,4067042-4067099,4067322-4067608,
4067706-4067822,4067898-4067958,4068042-4068133,
4068547-4068632,4068926-4068975,4069077-4069117,
4069222-4069392,4069875-4069942,4070088-4070148,
4070471-4070757,4072008-4072172,4072759-4072760,
4072829-4073139,4073600-4073787,4075231-4075482,
4076035-4076114,4076199-4076399,4076959-4077014,
4077137-4077328
Length = 980
Score = 70.9 bits (166), Expect = 1e-12
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = -3
Query: 750 SLKSVKEFADNVLHKYPKINLLVNNAGIMYGKYELTTDGFESQLAVNHLGHFYLTHLLLP 571
SL SV+ FA + +N+L+NNAGIM ++L+ DG E Q A NH+GHF LT+LLL
Sbjct: 783 SLDSVRRFATAFDSSHTHLNILINNAGIMGCPFKLSKDGIELQFATNHVGHFLLTNLLLD 842
Query: 570 ALKK-AGNLCEPSRFINVTSCGH 505
+K A R +NV+S H
Sbjct: 843 KMKSTARKTGVQGRIVNVSSIAH 865
>06_03_0618 +
22798419-22798588,22798672-22798771,22798891-22798971,
22799131-22799180,22799302-22799452,22800027-22800083,
22800171-22800292,22800397-22800601
Length = 311
Score = 67.7 bits (158), Expect = 1e-11
Identities = 48/142 (33%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Frame = -3
Query: 750 SLKSVKEFADNVLHKYPKINLLVNNAGIMYGKYELTTDGFESQLAVNHLGHFYLTHLLLP 571
S+ VK FA +++LVNNAG++ K T +G E AVN + LT L++P
Sbjct: 96 SISEVKSFATKFSSTDKPLHVLVNNAGLLEHKRVTTPEGLELNFAVNVAATYTLTELVMP 155
Query: 570 ALKKAGNLCEPSRFINVTSCGHYPGQIYFDDINMKEHYDETAAYAQSKLAQLMMA-RYIN 394
L+KA +R I V+S G Y + D + ++D T YA++K Q+ + R+
Sbjct: 156 LLEKA---APDARVITVSSGGMYTEPLNKDLQFGENNFDGTQQYARNKRVQVALTERWSE 212
Query: 393 KIMEENNIPVKGYSVHPGIVNT 328
K +N V YS+HPG +T
Sbjct: 213 KC---SNKGVGFYSMHPGWADT 231
>09_02_0572 -
10796997-10797152,10797259-10797412,10798023-10798065,
10798470-10798588,10798718-10798926,10799534-10799583,
10799610-10799718
Length = 279
Score = 64.5 bits (150), Expect = 9e-11
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 7/89 (7%)
Frame = -3
Query: 750 SLKSVKEFADNVLHKYPK-------INLLVNNAGIMYGKYELTTDGFESQLAVNHLGHFY 592
S KS+K+F + L+++ K I LLVNNAGI+ Y +T DG + + N++G F
Sbjct: 76 SYKSIKKF-ETSLNQWIKDSNMEHSIQLLVNNAGILAKSYRITEDGLDEMIQANYIGPFV 134
Query: 591 LTHLLLPALKKAGNLCEPSRFINVTSCGH 505
LT++LLP LK N PSR +N+TS H
Sbjct: 135 LTNILLPLLK---NSSTPSRVVNLTSFTH 160
>04_04_1598 + 34698260-34698316,34698438-34699544
Length = 387
Score = 52.8 bits (121), Expect = 3e-07
Identities = 57/186 (30%), Positives = 81/186 (43%), Gaps = 32/186 (17%)
Frame = -3
Query: 750 SLKSVKEFADNVLHKYPKINLLVNNAGIMYGKYE---LTTDGFESQLAVNHLGHFYLTHL 580
SL SV++F DN ++ LV NA I T DG+E + VNHLGHF L L
Sbjct: 134 SLDSVRQFVDNFRRSGMPLDALVCNAAIYRPTARQPTFTADGYEMSVGVNHLGHFLLARL 193
Query: 579 LLPALKKAGNLCEPSRFINV---------TSCGHYPGQIYFDD----------------I 475
+L LKK+ PSR + + T G+ P + D I
Sbjct: 194 MLDDLKKSD---YPSRRLIILGSITGNTNTLAGNVPPKAGLGDLRGLAGGLRGQNGSAMI 250
Query: 474 NMKEHYDETAAYAQSKLAQLM-MARYINKIMEENNIPVKGYSVHPG-IVNTDLFDGTV-- 307
+ E +D AY SK+ ++ M + + EE I S++PG I T LF +
Sbjct: 251 DGAESFDGAKAYKDSKICNMLTMQEFHRRFHEETGITFA--SLYPGCIATTGLFREHIPL 308
Query: 306 FKRVFP 289
F+ +FP
Sbjct: 309 FRLLFP 314
>10_08_0505 +
18384392-18384454,18384593-18384679,18385878-18386409,
18387042-18387564,18387734-18387791
Length = 420
Score = 45.6 bits (103), Expect = 4e-05
Identities = 70/257 (27%), Positives = 108/257 (42%), Gaps = 38/257 (14%)
Frame = -3
Query: 750 SLKSVKEFADNVLHKYPKINLLVNNAGIMYGKYE---LTTDGFESQLAVNHLGHFYLTHL 580
SL SV++F NV ++++V NA + + T DGFE + VNHLGHF L
Sbjct: 146 SLDSVRQFVANVRRLEMPVDVVVCNAAVYQPTAKQPSFTADGFEMSVGVNHLGHFLLARE 205
Query: 579 LLPALKKAGNLCEPSRFINV---------TSCGHYPGQIYFDDIN-------------MK 466
LL L + PS+ + + T G+ P + D+ M
Sbjct: 206 LLADLTSSD---YPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLASGLDGVSSSAMI 262
Query: 465 E--HYDETAAYAQSKLAQLM-MARYINKIMEENNIPVKGYSVHPG-IVNTDLFDGTV--F 304
+ +D AY SK+ ++ M + + E + S++PG I T LF V F
Sbjct: 263 DGGEFDGAKAYKDSKVCNMLTMQEFHRRYHGETGVTFA--SLYPGCIATTGLFREHVPLF 320
Query: 303 KRVFPWAMKLFFK--TPEKGAVSILFACFNEELQKRGGLYIS--NCIEGISNRFSKNL-- 142
+ +FP K K E+ A L ++ + G+Y S N N+ S+
Sbjct: 321 RLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPSLTKSGVYWSWNNNSASFENQLSEEASD 380
Query: 141 -EYQKILXELSCQLVGI 94
E K + ELS +LVG+
Sbjct: 381 PEKAKKVWELSEKLVGL 397
>04_04_0605 + 26549904-26551939,26553931-26554180,26554764-26554829,
26555194-26555388,26555830-26556141,26556537-26556595,
26557138-26557381,26557466-26557528,26557997-26558386
Length = 1204
Score = 36.3 bits (80), Expect = 0.027
Identities = 38/140 (27%), Positives = 60/140 (42%)
Frame = -3
Query: 741 SVKEFADNVLHKYPKINLLVNNAGIMYGKYELTTDGFESQLAVNHLGHFYLTHLLLPALK 562
SV AD + ++ K+ +LVNNA + ++ D E Q VN+ L L
Sbjct: 1036 SVSRLADFLTTRFGKLEILVNNAAVSGMEHAQRVDTNEEQWLVNNED-------LRKELD 1088
Query: 561 KAGNLCEPSRFINVTSCGHYPGQIYFDDINMKEHYDETAAYAQSKLAQLMMARYINKIME 382
NL E R V F+ ++ H TA + K+A++ M Y +I+
Sbjct: 1089 DVDNLTE-ERLDEVLDSFLKD----FEAGALEAHGWPTAPFVAYKMAKVAMNAY-TRILA 1142
Query: 381 ENNIPVKGYSVHPGIVNTDL 322
+ ++ VHPG V TD+
Sbjct: 1143 RRHPELRVNCVHPGYVKTDM 1162
>11_04_0145 +
14082864-14082946,14083060-14083267,14083383-14083599,
14084170-14084276,14085521-14085674,14086848-14087029
Length = 316
Score = 33.9 bits (74), Expect = 0.14
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = -3
Query: 699 KINLLVNNAGIMYGK--YELTTDGFESQLAVNHLGHFYLTHLLLPALKKAG 553
K+++LVNNAG Y K +LT + + N F+L+ L P LK +G
Sbjct: 93 KLSILVNNAGTAYLKPAADLTPEETSRLMTTNFESCFHLSQLFYPLLKDSG 143
>04_04_1139 +
31173271-31173462,31173928-31174087,31174318-31174487,
31174566-31174788,31175053-31175207
Length = 299
Score = 33.5 bits (73), Expect = 0.19
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Frame = -3
Query: 753 KSLKSVKEFADNVLHKYPKINLLVNNAG--IMYGKYELTTDGFESQLAVNHLGHFYLTHL 580
K + + A V H + K+++LVN A + +LT GF + + ++ +G + + +
Sbjct: 74 KQEDAARVVAATVQH-FGKLDILVNGAAGNFLASPEDLTPKGFRTVVDIDTVGTYTMCYE 132
Query: 579 LLPALKKAGNLCEPSR---FINVTSCGHYPGQIY 487
L LKK G PS IN+++ HY Y
Sbjct: 133 ALKYLKKGGPGKGPSTGGVIINISATLHYTAAWY 166
>11_04_0128 +
13752727-13752809,13752922-13753129,13753238-13753303,
13753611-13753767,13755629-13755712,13756355-13756461,
13756832-13756958,13757319-13757407,13757812-13757943
Length = 350
Score = 33.1 bits (72), Expect = 0.25
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 4/75 (5%)
Frame = -3
Query: 699 KINLLVNNAGIMYGK--YELTTDGFESQLAVNHLGHFYLTHLLLPALK--KAGNLCEPSR 532
K+++LVN AG+ + K ELT D + +N F+L+ L P LK + G + S
Sbjct: 93 KLSILVNCAGMSFLKPAVELTPDDCSQVMGMNFESCFHLSQLAYPLLKASQRGCIINISS 152
Query: 531 FINVTSCGHYPGQIY 487
+V + P +Y
Sbjct: 153 IASVVAFCSLPNAVY 167
>03_02_0501 -
8920458-8920646,8920918-8921024,8921136-8921352,
8921744-8922157
Length = 308
Score = 32.3 bits (70), Expect = 0.44
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = -3
Query: 699 KINLLVNNAGIMYGKY--ELTTDGFESQLAVNHLGHFYLTHLLLPALKKAGN 550
K+++LVNN G + K E + D + +A N ++L L P LK +G+
Sbjct: 134 KLDILVNNVGTNFSKQTTEYSADDYSFIMATNLESAYHLCQLAHPLLKSSGS 185
>02_05_0093 +
25753021-25753061,25753159-25753402,25753843-25753905,
25753985-25754179,25754489-25754893
Length = 315
Score = 31.9 bits (69), Expect = 0.58
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -3
Query: 741 SVKEFADNVLHKYPKINLLVNNAGIM 664
S AD + HK+ K+++LVNNAGI+
Sbjct: 77 SAAGLADFIKHKFGKLDILVNNAGIL 102
Score = 31.9 bits (69), Expect = 0.58
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = -3
Query: 456 DETAAYAQSKLAQLMMARYI-NKIMEENNIPVKGYSVHPGIVNTDLFDGT 310
D AAY SK Q R + K ++ P++ VHPG V TD+ GT
Sbjct: 229 DAFAAYKTSKALQHAYTRVLARKHASSSSSPLRVNCVHPGYVKTDMTLGT 278
>04_03_0100 +
11232801-11232889,11233417-11233624,11233907-11234129,
11234214-11234221
Length = 175
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -3
Query: 699 KINLLVNNAGIMYGK--YELTTDGFESQLAVNHLGHFYLTHLLLPALKKAG 553
K+++LVNN G ++ K +T + +A N F+L+ L+ P LK +G
Sbjct: 95 KLDILVNNVGFLFLKPAVNVTPEELSRVMAGNLESCFHLSQLMHPLLKTSG 145
>05_06_0257 +
26723858-26724049,26724073-26724230,26724886-26725024,
26725130-26725315,26727117-26727310,26728113-26728193,
26728248-26728338,26728414-26728590
Length = 405
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/28 (39%), Positives = 19/28 (67%)
Frame = -3
Query: 270 FKTPEKGAVSILFACFNEELQKRGGLYI 187
F+ E G V ++F+CF+E+ QK G + +
Sbjct: 142 FQLMEPGFVGLIFSCFSEDAQKVGKIQV 169
>04_03_0745 +
19244089-19244521,19244638-19244723,19245090-19245221,
19245335-19245499,19245602-19245892
Length = 368
Score = 29.9 bits (64), Expect = 2.3
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Frame = -3
Query: 735 KEFADNVLHKYPKINLLVNNAGIM-YGKYELTTD--GFESQLAVNHLGHFYLTHLLLPAL 565
+ F + + +++ LVNNAG+ +E D F+ L VN G + TH LP L
Sbjct: 132 RRFVQATVEHFGRLDHLVNNAGLANVCWFEEVPDVANFKQVLDVNFWGTVHPTHAALPHL 191
Query: 564 K 562
K
Sbjct: 192 K 192
>10_08_0832 - 20905189-20905347,20905793-20905877,20906385-20906458
Length = 105
Score = 29.5 bits (63), Expect = 3.1
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = -3
Query: 255 KGAVSILFACFNEELQKRGGLYISNCIEGISNRFSKNLEYQKILXELSCQLV 100
KGA + + + +++ G Y SNC + + N E K L E S ++V
Sbjct: 53 KGAATTCYVALHPQVKGISGKYFSNCNLDSPSSHASNAELAKKLWEFSSKVV 104
>02_04_0478 - 23261273-23261530,23262243-23262312,23263304-23263953
Length = 325
Score = 29.5 bits (63), Expect = 3.1
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Frame = -3
Query: 699 KINLLVNNAGIM--YGKY--ELTTDGFESQLAVNHLGHFYLTHLLLPAL 565
++ +LVNNAG+ Y +Y E+ + + + VN G +TH +LPA+
Sbjct: 136 EVGVLVNNAGVSYPYARYLHEVDEELMRTLIRVNVEGLTRVTHAVLPAM 184
>12_02_1230 - 27204881-27205765
Length = 294
Score = 29.1 bits (62), Expect = 4.1
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Frame = -3
Query: 744 KSVKEFADNVLHKYPKINLLVNNAGI-MYGKY-ELTTDGFESQLAVNHLGHFYLTHLLLP 571
+SV+ VL ++ ++++LVNNAGI G EL + + VN LG + + P
Sbjct: 73 ESVEGAVARVLAEHGRVDVLVNNAGIGCTGPLAELRGEAVRRAMDVNFLGQLRMVRAVAP 132
Query: 570 --ALKKAGNL 547
A +++G +
Sbjct: 133 HMASRRSGRV 142
>04_03_0746 +
19247529-19247723,19247808-19248000,19248145-19248230,
19248861-19249028,19249445-19249738
Length = 311
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = -3
Query: 735 KEFADNVLHKYPKINLLVNNAGI-MYGKYELTTD 637
++F D+ + + +++ LVNNA I GK+E TD
Sbjct: 117 RKFVDDTIRYFGRLDHLVNNASIWQVGKFEELTD 150
>08_02_1003 +
23457092-23457403,23457498-23457591,23457695-23457806,
23458203-23458260
Length = 191
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 648 LTTDGFESQLAVNHLGHFYLTHLLLPALKKAG 553
++ D F LAV+ G FY H ++P + + G
Sbjct: 82 ISPDAFHRALAVSAAGAFYCAHQVIPGMVERG 113
>01_07_0056 - 40787723-40788124,40788236-40788430,40788914-40789309
Length = 330
Score = 28.3 bits (60), Expect = 7.1
Identities = 19/77 (24%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = -3
Query: 741 SVKEFADNVLHKYPKINLLVNNAGIMYGK-YELTTDGFESQLAVNHLGHFYLTHLLLPAL 565
SV+ FA V + +++LVNNAG+ + + + + + E + N+ G + ++P +
Sbjct: 114 SVEGFATWVERTHGGVHVLVNNAGVNFNRGADNSVEFAEQVIETNYFGTKRMIEAMMPLM 173
Query: 564 KKAGNLCEPSRFINVTS 514
+ + R +NV+S
Sbjct: 174 ITSPH---GGRIVNVSS 187
>05_06_0223 -
26525618-26526112,26526203-26526370,26526649-26527473,
26527898-26528004,26529701-26529767
Length = 553
Score = 27.9 bits (59), Expect = 9.4
Identities = 21/81 (25%), Positives = 37/81 (45%)
Frame = +2
Query: 170 PSIQLLMYNPPRFCNSSLKHAKSIETAPFSGVLKNNFIAHGKTLLKTVPSNKSVLTIPGC 349
P++ L+Y+ SL + ++T + K NF+ + T L+ + N LTI
Sbjct: 273 PNLSSLIYSG-NLIELSLGQSSQVKTLDINFYDKTNFLCYVITKLQNIVPNLESLTIYSD 331
Query: 350 TEYPLTGILFSSIILLMYLAI 412
E T ++ + + L YL I
Sbjct: 332 DERINTPMVDAKFLHLKYLEI 352
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,630,629
Number of Sequences: 37544
Number of extensions: 373457
Number of successful extensions: 886
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 852
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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