Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12j16
(407 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U84213-1|AAB58540.1| 113|Homo sapiens defender against death 1 ... 142 5e-34
D15057-1|BAA03650.1| 113|Homo sapiens DAD-1 protein. 142 5e-34
CR542204-1|CAG47001.1| 113|Homo sapiens DAD1 protein. 142 5e-34
CR407682-1|CAG28610.1| 113|Homo sapiens DAD1 protein. 142 5e-34
BC007403-1|AAH07403.1| 113|Homo sapiens defender against cell d... 142 5e-34
AY259117-1|AAO74827.1| 113|Homo sapiens defender against cell d... 142 5e-34
BC009798-1|AAH09798.1| 113|Homo sapiens defender against cell d... 139 3e-33
AK223129-1|BAD96849.1| 113|Homo sapiens defender against cell d... 139 4e-33
U24055-1|AAB50277.1| 427|Homo sapiens inward rectifier K+ chann... 33 0.37
U22413-1|AAA64282.1| 427|Homo sapiens inward rectifier potassiu... 33 0.37
U16861-1|AAA91781.1| 427|Homo sapiens inward rectifying potassi... 33 0.37
U12507-1|AAC50072.1| 427|Homo sapiens cardiac inward rectifier ... 33 0.37
AF153820-1|AAF73241.1| 427|Homo sapiens inwardly-rectifying pot... 33 0.37
AF153819-1|AAF73242.1| 427|Homo sapiens inwardly-rectifying pot... 33 0.37
AF021139-1|AAB88797.1| 427|Homo sapiens inward rectifier potass... 33 0.37
AF011904-1|AAC39555.1| 427|Homo sapiens inwardly rectifying pot... 33 0.37
AC005955-1|AAC72273.1| 244|Homo sapiens CGM7_HUMAN protein. 31 2.0
AC005794-1|AAC62829.1| 141|Homo sapiens nonspecific cross-react... 31 2.0
>U84213-1|AAB58540.1| 113|Homo sapiens defender against death 1
protein protein.
Length = 113
Score = 142 bits (343), Expect = 5e-34
Identities = 60/98 (61%), Positives = 78/98 (79%)
Frame = -1
Query: 344 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 165
+S+ +VI + +EY + TP++LK++DAYL YI LT +QFGYC LVGTFPFNSFLSGFIS
Sbjct: 3 ASVVSVISRFLEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFIS 62
Query: 164 TVSCFVLGVCXRLQVNPENKNEFQGLXAERGFADFIFA 51
V F+L VC R+Q+NP+NK +FQG+ ER FADF+FA
Sbjct: 63 CVGSFILAVCLRIQINPQNKADFQGISPERAFADFLFA 100
>D15057-1|BAA03650.1| 113|Homo sapiens DAD-1 protein.
Length = 113
Score = 142 bits (343), Expect = 5e-34
Identities = 60/98 (61%), Positives = 78/98 (79%)
Frame = -1
Query: 344 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 165
+S+ +VI + +EY + TP++LK++DAYL YI LT +QFGYC LVGTFPFNSFLSGFIS
Sbjct: 3 ASVVSVISRFLEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFIS 62
Query: 164 TVSCFVLGVCXRLQVNPENKNEFQGLXAERGFADFIFA 51
V F+L VC R+Q+NP+NK +FQG+ ER FADF+FA
Sbjct: 63 CVGSFILAVCLRIQINPQNKADFQGISPERAFADFLFA 100
>CR542204-1|CAG47001.1| 113|Homo sapiens DAD1 protein.
Length = 113
Score = 142 bits (343), Expect = 5e-34
Identities = 60/98 (61%), Positives = 78/98 (79%)
Frame = -1
Query: 344 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 165
+S+ +VI + +EY + TP++LK++DAYL YI LT +QFGYC LVGTFPFNSFLSGFIS
Sbjct: 3 ASVVSVISRFLEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFIS 62
Query: 164 TVSCFVLGVCXRLQVNPENKNEFQGLXAERGFADFIFA 51
V F+L VC R+Q+NP+NK +FQG+ ER FADF+FA
Sbjct: 63 CVGSFILAVCLRIQINPQNKADFQGISPERAFADFLFA 100
>CR407682-1|CAG28610.1| 113|Homo sapiens DAD1 protein.
Length = 113
Score = 142 bits (343), Expect = 5e-34
Identities = 60/98 (61%), Positives = 78/98 (79%)
Frame = -1
Query: 344 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 165
+S+ +VI + +EY + TP++LK++DAYL YI LT +QFGYC LVGTFPFNSFLSGFIS
Sbjct: 3 ASVVSVISRFLEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFIS 62
Query: 164 TVSCFVLGVCXRLQVNPENKNEFQGLXAERGFADFIFA 51
V F+L VC R+Q+NP+NK +FQG+ ER FADF+FA
Sbjct: 63 CVGSFILAVCLRIQINPQNKADFQGISPERAFADFLFA 100
>BC007403-1|AAH07403.1| 113|Homo sapiens defender against cell
death 1 protein.
Length = 113
Score = 142 bits (343), Expect = 5e-34
Identities = 60/98 (61%), Positives = 78/98 (79%)
Frame = -1
Query: 344 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 165
+S+ +VI + +EY + TP++LK++DAYL YI LT +QFGYC LVGTFPFNSFLSGFIS
Sbjct: 3 ASVVSVISRFLEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFIS 62
Query: 164 TVSCFVLGVCXRLQVNPENKNEFQGLXAERGFADFIFA 51
V F+L VC R+Q+NP+NK +FQG+ ER FADF+FA
Sbjct: 63 CVGSFILAVCLRIQINPQNKADFQGISPERAFADFLFA 100
>AY259117-1|AAO74827.1| 113|Homo sapiens defender against cell
death 1 protein.
Length = 113
Score = 142 bits (343), Expect = 5e-34
Identities = 60/98 (61%), Positives = 78/98 (79%)
Frame = -1
Query: 344 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 165
+S+ +VI + +EY + TP++LK++DAYL YI LT +QFGYC LVGTFPFNSFLSGFIS
Sbjct: 3 ASVVSVISRFLEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFIS 62
Query: 164 TVSCFVLGVCXRLQVNPENKNEFQGLXAERGFADFIFA 51
V F+L VC R+Q+NP+NK +FQG+ ER FADF+FA
Sbjct: 63 CVGSFILAVCLRIQINPQNKADFQGISPERAFADFLFA 100
>BC009798-1|AAH09798.1| 113|Homo sapiens defender against cell
death 1 protein.
Length = 113
Score = 139 bits (337), Expect = 3e-33
Identities = 59/98 (60%), Positives = 77/98 (78%)
Frame = -1
Query: 344 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 165
+S+ +VI + +EY + P++LK++DAYL YI LT +QFGYC LVGTFPFNSFLSGFIS
Sbjct: 3 ASVVSVISRFLEEYLSSIPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFIS 62
Query: 164 TVSCFVLGVCXRLQVNPENKNEFQGLXAERGFADFIFA 51
V F+L VC R+Q+NP+NK +FQG+ ER FADF+FA
Sbjct: 63 CVGSFILAVCLRIQINPQNKADFQGISPERAFADFLFA 100
>AK223129-1|BAD96849.1| 113|Homo sapiens defender against cell
death 1 variant protein.
Length = 113
Score = 139 bits (336), Expect = 4e-33
Identities = 59/98 (60%), Positives = 77/98 (78%)
Frame = -1
Query: 344 SSLTAVIPKLYQEYTTKTPKKLKIIDAYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFIS 165
+S+ +VI + +EY + TP++LK++DAYL YI LT +QFGYC LVGTFPFNSFLSGFIS
Sbjct: 3 ASVVSVISRFLEEYLSSTPQRLKLLDAYLLYILLTGALQFGYCLLVGTFPFNSFLSGFIS 62
Query: 164 TVSCFVLGVCXRLQVNPENKNEFQGLXAERGFADFIFA 51
V F+L VC R+Q+NP+NK +FQG+ R FADF+FA
Sbjct: 63 CVGSFILAVCLRIQINPQNKADFQGISPGRAFADFLFA 100
>U24055-1|AAB50277.1| 427|Homo sapiens inward rectifier K+ channel
protein protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.37
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -1
Query: 266 AYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSC----FVLGVCXRLQVNPENKNE 99
A+LF I I +G+ C+ P F+ F S V C F++G P+ +NE
Sbjct: 132 AFLFSIETQTTIGYGFRCVTDECPIAVFMVVFQSIVGCIIDAFIIGAVMAKMAKPKKRNE 191
>U22413-1|AAA64282.1| 427|Homo sapiens inward rectifier potassium
channel protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.37
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -1
Query: 266 AYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSC----FVLGVCXRLQVNPENKNE 99
A+LF I I +G+ C+ P F+ F S V C F++G P+ +NE
Sbjct: 132 AFLFSIETQTTIGYGFRCVTDECPIAVFMVVFQSIVGCIIDAFIIGAVMAKMAKPKKRNE 191
>U16861-1|AAA91781.1| 427|Homo sapiens inward rectifying potassium
channel protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.37
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -1
Query: 266 AYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSC----FVLGVCXRLQVNPENKNE 99
A+LF I I +G+ C+ P F+ F S V C F++G P+ +NE
Sbjct: 132 AFLFSIETQTTIGYGFRCVTDECPIAVFMVVFQSIVGCIIDAFIIGAVMAKMAKPKKRNE 191
>U12507-1|AAC50072.1| 427|Homo sapiens cardiac inward rectifier
potassium channel protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.37
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -1
Query: 266 AYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSC----FVLGVCXRLQVNPENKNE 99
A+LF I I +G+ C+ P F+ F S V C F++G P+ +NE
Sbjct: 132 AFLFSIETQTTIGYGFRCVTDECPIAVFMVVFQSIVGCIIDAFIIGAVMAKMAKPKKRNE 191
>AF153820-1|AAF73241.1| 427|Homo sapiens inwardly-rectifying
potassium channel Kir2.1 protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.37
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -1
Query: 266 AYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSC----FVLGVCXRLQVNPENKNE 99
A+LF I I +G+ C+ P F+ F S V C F++G P+ +NE
Sbjct: 132 AFLFSIETQTTIGYGFRCVTDECPIAVFMVVFQSIVGCIIDAFIIGAVMAKMAKPKKRNE 191
>AF153819-1|AAF73242.1| 427|Homo sapiens inwardly-rectifying
potassium channel Kir2.1 protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.37
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -1
Query: 266 AYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSC----FVLGVCXRLQVNPENKNE 99
A+LF I I +G+ C+ P F+ F S V C F++G P+ +NE
Sbjct: 132 AFLFSIETQTTIGYGFRCVTDECPIAVFMVVFQSIVGCIIDAFIIGAVMAKMAKPKKRNE 191
>AF021139-1|AAB88797.1| 427|Homo sapiens inward rectifier potassium
channel protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.37
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -1
Query: 266 AYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSC----FVLGVCXRLQVNPENKNE 99
A+LF I I +G+ C+ P F+ F S V C F++G P+ +NE
Sbjct: 132 AFLFSIETQTTIGYGFRCVTDECPIAVFMVVFQSIVGCIIDAFIIGAVMAKMAKPKKRNE 191
>AF011904-1|AAC39555.1| 427|Homo sapiens inwardly rectifying
potassium channel Kir 2.1 protein.
Length = 427
Score = 33.1 bits (72), Expect = 0.37
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -1
Query: 266 AYLFYIFLTAVIQFGYCCLVGTFPFNSFLSGFISTVSC----FVLGVCXRLQVNPENKNE 99
A+LF I I +G+ C+ P F+ F S V C F++G P+ +NE
Sbjct: 132 AFLFSIETQTTIGYGFRCVTDECPIAVFMVVFQSIVGCIIDAFIIGAVMAKMAKPKKRNE 191
>AC005955-1|AAC72273.1| 244|Homo sapiens CGM7_HUMAN protein.
Length = 244
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 64 SAKPRSALSPWNSFLFSGLTCSRXHTPRTKQLTVDIKP 177
SA PR PW L + + H P T Q T++ P
Sbjct: 5 SAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALP 42
>AC005794-1|AAC62829.1| 141|Homo sapiens nonspecific cross-reacting
antigen W236 precursor - human [AA 1-141] protein.
Length = 141
Score = 30.7 bits (66), Expect = 2.0
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +1
Query: 64 SAKPRSALSPWNSFLFSGLTCSRXHTPRTKQLTVDIKP 177
SA PR PW L + + H P T Q T++ P
Sbjct: 5 SAAPRGGHRPWQGLLITASLLTFWHPPTTVQFTIEALP 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,659,740
Number of Sequences: 237096
Number of extensions: 1061768
Number of successful extensions: 2162
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2162
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 3043111070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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