Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12j03
(754 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 103 1e-24
AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein. 70 2e-14
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 69 5e-14
AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C prot... 67 2e-13
DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase ... 54 2e-09
DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase ... 54 2e-09
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 50 3e-08
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 25 1.0
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 24 1.3
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 22 5.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 7.1
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 22 7.1
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 103 bits (248), Expect = 1e-24
Identities = 44/96 (45%), Positives = 68/96 (70%)
Frame = -1
Query: 664 KIFVAEIAIAIDFLHNAGVIYRDLKPENILLDAECHIQLIDFGLSKWLSIGSRTTTLCGT 485
+ + A + A D+LH+ +IYRDLKPEN+LLD++ +++L+DFG +K L G +T T CGT
Sbjct: 469 RFYTACVVEAFDYLHSRNIIYRDLKPENLLLDSQGYVKLVDFGFAKRLDHGRKTWTFCGT 528
Query: 484 LNYMAPEVLSREPYGHAADWWSLGIVTCRMLTGEFP 377
Y+APEV+ + + +AD+WSLG++ +LTG P
Sbjct: 529 PEYVAPEVILNKGHDISADYWSLGVLMFELLTGTPP 564
>AB183889-1|BAD86829.1| 316|Apis mellifera Mos protein.
Length = 316
Score = 70.1 bits (164), Expect = 2e-14
Identities = 36/90 (40%), Positives = 51/90 (56%)
Frame = -1
Query: 646 IAIAIDFLHNAGVIYRDLKPENILLDAECHIQLIDFGLSKWLSIGSRTTTLCGTLNYMAP 467
I A+ F HNAG+++ D+KP+NIL+ +L DFG S + + GT Y AP
Sbjct: 164 ITCALQFCHNAGIVHADVKPKNILMSKNGQPKLTDFGSSVLIGAPNEIDKFYGTPGYTAP 223
Query: 466 EVLSREPYGHAADWWSLGIVTCRMLTGEFP 377
EV+ + AAD +SLGIV +ML + P
Sbjct: 224 EVIKQNRPTPAADIYSLGIVAWQMLFRKLP 253
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 68.9 bits (161), Expect = 5e-14
Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Frame = -1
Query: 655 VAEIAIAIDFLHNAGVIYRDLKPENILLDAECH---IQLIDFGLSKWLSIGSRTTT-LCG 488
+ +I ++ H+ GV++RDLKPEN+LL ++ ++L DFGL+ + ++ G
Sbjct: 15 IQQILESVHHCHHNGVVHRDLKPENLLLASKAKGAAVKLADFGLAIEVQGEAQAWFGFAG 74
Query: 487 TLNYMAPEVLSREPYGHAADWWSLGIVTCRMLTGEFP 377
T Y++PEVL +EPYG D W+ G++ +L G P
Sbjct: 75 TPGYLSPEVLKKEPYGKPVDIWACGVILYILLVGYPP 111
>AB013288-1|BAA87894.1| 149|Apis mellifera protein kinase C
protein.
Length = 149
Score = 66.9 bits (156), Expect = 2e-13
Identities = 30/63 (47%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Frame = -1
Query: 670 IVKIFVAEIAIAIDFLHNAGVIYRDLKPENILLDAECHIQLIDFGLSKWLSIGSRTT-TL 494
+ + +EIAI + FLH G++YRDLK +N+LLD + HI++ DFG+ K G +TT T
Sbjct: 86 VAVFYASEIAIGLFFLHGRGIVYRDLKLDNVLLDQDGHIKIADFGMCKEGISGDKTTKTF 145
Query: 493 CGT 485
CGT
Sbjct: 146 CGT 148
>DQ013068-1|AAY81956.1| 931|Apis mellifera dusty protein kinase
isoform B protein.
Length = 931
Score = 53.6 bits (123), Expect = 2e-09
Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = -1
Query: 649 EIAIAIDFLHNAGVIYRDLKPENILLDAECHIQLIDFG--LSKWLSIGSRTTTLCGTLNY 476
++ I +LH+ G+++RD+K +N+LLD E +L DFG +++ + +GS + GT +
Sbjct: 705 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMMLGS----IVGTPVH 760
Query: 475 MAPEVLSREPYGHAADWWSLGIVTCRMLTG 386
MAPE+LS Y + D ++ GI+ + G
Sbjct: 761 MAPELLSGH-YDSSVDVYAFGILFWYLCAG 789
>DQ013067-1|AAY81955.1| 969|Apis mellifera dusty protein kinase
isoform A protein.
Length = 969
Score = 53.6 bits (123), Expect = 2e-09
Identities = 31/90 (34%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Frame = -1
Query: 649 EIAIAIDFLHNAGVIYRDLKPENILLDAECHIQLIDFG--LSKWLSIGSRTTTLCGTLNY 476
++ I +LH+ G+++RD+K +N+LLD E +L DFG +++ + +GS + GT +
Sbjct: 743 DVLEGIRYLHSQGLVHRDVKLKNVLLDIENRAKLTDFGFCITEVMMLGS----IVGTPVH 798
Query: 475 MAPEVLSREPYGHAADWWSLGIVTCRMLTG 386
MAPE+LS Y + D ++ GI+ + G
Sbjct: 799 MAPELLSGH-YDSSVDVYAFGILFWYLCAG 827
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 49.6 bits (113), Expect = 3e-08
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Frame = -1
Query: 646 IAIAIDFLHNAGVIYRDLKPENILLDAECHIQLIDFGLSKWLSIGSR--TTTLCGTL--N 479
IA + +L ++RDL N+L++A ++ DFGLS+ + + TT G +
Sbjct: 744 IASGMQYLAEMNYVHRDLAARNVLVNAALVCKIADFGLSREIESATEGAYTTRGGKIPVR 803
Query: 478 YMAPEVLSREPYGHAADWWSLGIVTCRMLT-GEFP 377
+ APE ++ + A+D WS+GIV +++ GE P
Sbjct: 804 WTAPEAIAFRKFTSASDVWSMGIVCWEVMSYGERP 838
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 24.6 bits (51), Expect = 1.0
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = -1
Query: 370 FVSAGSKTEHEETTSIHVANNEFNNSKKKTSDHFIPKTLPKSADSIS 230
F S S+ E TS+ FN + + + F+P ++ +S+ S++
Sbjct: 265 FHSLASRVESWVNTSVIRNYTLFNENSEAAARSFVPFSIERSSQSVA 311
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.2 bits (50), Expect = 1.3
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -3
Query: 272 LYPKNSSKECRLHIECRERFTDEVI 198
+YP + ++EC+L +E TDE+I
Sbjct: 169 IYP-HDTQECKLQMESLSHTTDEMI 192
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 22.2 bits (45), Expect = 5.4
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = -2
Query: 378 QHHL*VPDPKRNTRRRHPFMSQTTNSI 298
QHH PDP + H Q T+ I
Sbjct: 349 QHHFFYPDPLASKYELHGLKFQWTDGI 375
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.8 bits (44), Expect = 7.1
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = +2
Query: 575 QNVFWLQIAVYHTGVVEKIYCNSYFGDENLH 667
+++F+LQI +++I N++ NLH
Sbjct: 356 KDLFFLQILDLRNNSIDRIESNAFLPLYNLH 386
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.8 bits (44), Expect = 7.1
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 316 RHEWMSSPRVPFWIRHLQMMLEILQLAFCMLRFPTTTNPRRDHT 447
RH + ++ P ++ L+ L +Q C+ R P +T + HT
Sbjct: 271 RHLFRTASSTPEDLQDLEEPLTTIQHNNCLTRIP-STRINKQHT 313
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,605
Number of Sequences: 438
Number of extensions: 5060
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23632110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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