Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12i18
(770 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC093954-1|AAH93954.1| 908|Homo sapiens KIAA1604 protein protein. 33 0.86
BC093952-1|AAH93952.1| 908|Homo sapiens KIAA1604 protein protein. 33 0.86
BC053573-1|AAH53573.1| 848|Homo sapiens KIAA1604 protein protein. 33 0.86
AK026978-1|BAB15612.1| 632|Homo sapiens protein ( Homo sapiens ... 33 0.86
AB046824-1|BAB13430.1| 937|Homo sapiens KIAA1604 protein protein. 33 0.86
BC084542-1|AAH84542.1| 197|Homo sapiens C21orf66 protein protein. 32 2.0
BC030539-1|AAH30539.1| 398|Homo sapiens C21orf66 protein protein. 32 2.0
AY033906-1|AAK68724.1| 511|Homo sapiens C21ORF66 isoform D prot... 32 2.0
AY033905-1|AAK68723.1| 469|Homo sapiens C21ORF66 isoform C prot... 32 2.0
AY033904-1|AAK68722.1| 815|Homo sapiens C21ORF66 isoform B prot... 32 2.0
AY033903-1|AAK68721.1| 917|Homo sapiens C21ORF66 isoform A prot... 32 2.0
AJ279081-1|CAC40814.1| 511|Homo sapiens putative transcription ... 32 2.0
AJ279080-1|CAC40813.1| 917|Homo sapiens putative transcription ... 32 2.0
AK124274-1|BAC85824.1| 128|Homo sapiens protein ( Homo sapiens ... 31 4.6
BC060792-1|AAH60792.1| 528|Homo sapiens ACBD3 protein protein. 30 8.0
BC045533-1|AAH45533.1| 528|Homo sapiens acyl-Coenzyme A binding... 30 8.0
BC034563-1|AAH34563.2| 360|Homo sapiens ACBD3 protein protein. 30 8.0
BC009518-1|AAH09518.1| 821|Homo sapiens coiled-coil domain cont... 30 8.0
AL592045-1|CAH71922.1| 528|Homo sapiens acyl-Coenzyme A binding... 30 8.0
AK057326-1|BAB71428.1| 607|Homo sapiens protein ( Homo sapiens ... 30 8.0
AK025520-1|BAB15159.1| 528|Homo sapiens protein ( Homo sapiens ... 30 8.0
AB043587-1|BAB20592.2| 528|Homo sapiens golgi resident protein ... 30 8.0
>BC093954-1|AAH93954.1| 908|Homo sapiens KIAA1604 protein protein.
Length = 908
Score = 33.5 bits (73), Expect = 0.86
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = -1
Query: 509 PSLWSRHDRVYNERIQQNDVKHENGLSRPSNVPASTMKTFGESDESDHRIMEIKKSMYKK 330
PS + + RV N+R Q+ + EN P +F E+++ HRI + ++ +K
Sbjct: 791 PSERNNYSRVANDRDQEMHIDLENKHGDPKKKRGERRNSFSENEKHTHRIKD-SENFRRK 849
Query: 329 PNSSIFSGNNENVEMRTISARDRYKISA 246
S N ++ R S DRY+ A
Sbjct: 850 DRSKSKEMNRKHSGSR--SDEDRYQNGA 875
>BC093952-1|AAH93952.1| 908|Homo sapiens KIAA1604 protein protein.
Length = 908
Score = 33.5 bits (73), Expect = 0.86
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = -1
Query: 509 PSLWSRHDRVYNERIQQNDVKHENGLSRPSNVPASTMKTFGESDESDHRIMEIKKSMYKK 330
PS + + RV N+R Q+ + EN P +F E+++ HRI + ++ +K
Sbjct: 791 PSERNNYSRVANDRDQEMHIDLENKHGDPKKKRGERRNSFSENEKHTHRIKD-SENFRRK 849
Query: 329 PNSSIFSGNNENVEMRTISARDRYKISA 246
S N ++ R S DRY+ A
Sbjct: 850 DRSKSKEMNRKHSGSR--SDEDRYQNGA 875
>BC053573-1|AAH53573.1| 848|Homo sapiens KIAA1604 protein protein.
Length = 848
Score = 33.5 bits (73), Expect = 0.86
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = -1
Query: 509 PSLWSRHDRVYNERIQQNDVKHENGLSRPSNVPASTMKTFGESDESDHRIMEIKKSMYKK 330
PS + + RV N+R Q+ + EN P +F E+++ HRI + ++ +K
Sbjct: 731 PSERNNYSRVANDRDQEMHIDLENKHGDPKKKRGERRNSFSENEKHTHRIKD-SENFRRK 789
Query: 329 PNSSIFSGNNENVEMRTISARDRYKISA 246
S N ++ R S DRY+ A
Sbjct: 790 DRSKSKEMNRKHSGSR--SDEDRYQNGA 815
>AK026978-1|BAB15612.1| 632|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23325 fis, clone HEP12505. ).
Length = 632
Score = 33.5 bits (73), Expect = 0.86
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = -1
Query: 509 PSLWSRHDRVYNERIQQNDVKHENGLSRPSNVPASTMKTFGESDESDHRIMEIKKSMYKK 330
PS + + RV N+R Q+ + EN P +F E+++ HRI + ++ +K
Sbjct: 515 PSERNNYSRVANDRDQEMHIDLENKHGDPKKKRGERRNSFSENEKHTHRIKD-SENFRRK 573
Query: 329 PNSSIFSGNNENVEMRTISARDRYKISA 246
S N ++ R S DRY+ A
Sbjct: 574 DRSKSKEMNRKHSGSR--SDEDRYQNGA 599
>AB046824-1|BAB13430.1| 937|Homo sapiens KIAA1604 protein protein.
Length = 937
Score = 33.5 bits (73), Expect = 0.86
Identities = 24/88 (27%), Positives = 40/88 (45%)
Frame = -1
Query: 509 PSLWSRHDRVYNERIQQNDVKHENGLSRPSNVPASTMKTFGESDESDHRIMEIKKSMYKK 330
PS + + RV N+R Q+ + EN P +F E+++ HRI + ++ +K
Sbjct: 820 PSERNNYSRVANDRDQEMHIDLENKHGDPKKKRGERRNSFSENEKHTHRIKD-SENFRRK 878
Query: 329 PNSSIFSGNNENVEMRTISARDRYKISA 246
S N ++ R S DRY+ A
Sbjct: 879 DRSKSKEMNRKHSGSR--SDEDRYQNGA 904
>BC084542-1|AAH84542.1| 197|Homo sapiens C21orf66 protein protein.
Length = 197
Score = 32.3 bits (70), Expect = 2.0
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -1
Query: 542 GPDESEPDFLPPSLWSRHDRVYNERIQQ-NDVKHENGLSRPSNVPASTMKTFGESDESDH 366
GP S P L P L + + + N +K VP +++ +F + +E +
Sbjct: 58 GPGPSPPSALTPGLGAEAGGGFPGGAEPGNGLKPRKRPRENKEVPRASLLSFQDEEEENE 117
Query: 365 RIMEIKKSMYKK 330
+ ++KKS Y K
Sbjct: 118 EVFKVKKSSYSK 129
>BC030539-1|AAH30539.1| 398|Homo sapiens C21orf66 protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 2.0
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -1
Query: 542 GPDESEPDFLPPSLWSRHDRVYNERIQQ-NDVKHENGLSRPSNVPASTMKTFGESDESDH 366
GP S P L P L + + + N +K VP +++ +F + +E +
Sbjct: 58 GPGPSPPSALTPGLGAEAGGGFPGGAEPGNGLKPRKRPRENKEVPRASLLSFQDEEEENE 117
Query: 365 RIMEIKKSMYKK 330
+ ++KKS Y K
Sbjct: 118 EVFKVKKSSYSK 129
>AY033906-1|AAK68724.1| 511|Homo sapiens C21ORF66 isoform D
protein.
Length = 511
Score = 32.3 bits (70), Expect = 2.0
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -1
Query: 542 GPDESEPDFLPPSLWSRHDRVYNERIQQ-NDVKHENGLSRPSNVPASTMKTFGESDESDH 366
GP S P L P L + + + N +K VP +++ +F + +E +
Sbjct: 58 GPGPSPPSALTPGLGAEAGGGFPGGAEPGNGLKPRKRPRENKEVPRASLLSFQDEEEENE 117
Query: 365 RIMEIKKSMYKK 330
+ ++KKS Y K
Sbjct: 118 EVFKVKKSSYSK 129
>AY033905-1|AAK68723.1| 469|Homo sapiens C21ORF66 isoform C
protein.
Length = 469
Score = 32.3 bits (70), Expect = 2.0
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -1
Query: 542 GPDESEPDFLPPSLWSRHDRVYNERIQQ-NDVKHENGLSRPSNVPASTMKTFGESDESDH 366
GP S P L P L + + + N +K VP +++ +F + +E +
Sbjct: 58 GPGPSPPSALTPGLGAEAGGGFPGGAEPGNGLKPRKRPRENKEVPRASLLSFQDEEEENE 117
Query: 365 RIMEIKKSMYKK 330
+ ++KKS Y K
Sbjct: 118 EVFKVKKSSYSK 129
>AY033904-1|AAK68722.1| 815|Homo sapiens C21ORF66 isoform B
protein.
Length = 815
Score = 32.3 bits (70), Expect = 2.0
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -1
Query: 542 GPDESEPDFLPPSLWSRHDRVYNERIQQ-NDVKHENGLSRPSNVPASTMKTFGESDESDH 366
GP S P L P L + + + N +K VP +++ +F + +E +
Sbjct: 58 GPGPSPPSALTPGLGAEAGGGFPGGAEPGNGLKPRKRPRENKEVPRASLLSFQDEEEENE 117
Query: 365 RIMEIKKSMYKK 330
+ ++KKS Y K
Sbjct: 118 EVFKVKKSSYSK 129
>AY033903-1|AAK68721.1| 917|Homo sapiens C21ORF66 isoform A
protein.
Length = 917
Score = 32.3 bits (70), Expect = 2.0
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -1
Query: 542 GPDESEPDFLPPSLWSRHDRVYNERIQQ-NDVKHENGLSRPSNVPASTMKTFGESDESDH 366
GP S P L P L + + + N +K VP +++ +F + +E +
Sbjct: 58 GPGPSPPSALTPGLGAEAGGGFPGGAEPGNGLKPRKRPRENKEVPRASLLSFQDEEEENE 117
Query: 365 RIMEIKKSMYKK 330
+ ++KKS Y K
Sbjct: 118 EVFKVKKSSYSK 129
>AJ279081-1|CAC40814.1| 511|Homo sapiens putative transcription
factor protein.
Length = 511
Score = 32.3 bits (70), Expect = 2.0
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -1
Query: 542 GPDESEPDFLPPSLWSRHDRVYNERIQQ-NDVKHENGLSRPSNVPASTMKTFGESDESDH 366
GP S P L P L + + + N +K VP +++ +F + +E +
Sbjct: 58 GPGPSPPSALTPGLGAEAGGGFPGGAEPGNGLKPRKRPRENKEVPRASLLSFQDEEEENE 117
Query: 365 RIMEIKKSMYKK 330
+ ++KKS Y K
Sbjct: 118 EVFKVKKSSYSK 129
>AJ279080-1|CAC40813.1| 917|Homo sapiens putative transcription
factor protein.
Length = 917
Score = 32.3 bits (70), Expect = 2.0
Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Frame = -1
Query: 542 GPDESEPDFLPPSLWSRHDRVYNERIQQ-NDVKHENGLSRPSNVPASTMKTFGESDESDH 366
GP S P L P L + + + N +K VP +++ +F + +E +
Sbjct: 58 GPGPSPPSALTPGLGAEAGGGFPGGAEPGNGLKPRKRPRENKEVPRASLLSFQDEEEENE 117
Query: 365 RIMEIKKSMYKK 330
+ ++KKS Y K
Sbjct: 118 EVFKVKKSSYSK 129
>AK124274-1|BAC85824.1| 128|Homo sapiens protein ( Homo sapiens
cDNA FLJ42280 fis, clone TLIVE2003197. ).
Length = 128
Score = 31.1 bits (67), Expect = 4.6
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = +2
Query: 611 RQSKWRCQLFRSHSPLFPPPRL*NPSDCS 697
R+ KW L S +PL PPP L + DCS
Sbjct: 80 RKKKWAGSLTLSTAPLSPPPSLVHCEDCS 108
>BC060792-1|AAH60792.1| 528|Homo sapiens ACBD3 protein protein.
Length = 528
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 557 EAEYEGPDESEPDFLPPSLWSRHD-RVYNERIQQN 456
EA GP ES P PS+W+R + + E+IQQ+
Sbjct: 356 EALENGPKESLPVIAAPSMWTRPQIKDFKEKIQQD 390
>BC045533-1|AAH45533.1| 528|Homo sapiens acyl-Coenzyme A binding
domain containing 3 protein.
Length = 528
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 557 EAEYEGPDESEPDFLPPSLWSRHD-RVYNERIQQN 456
EA GP ES P PS+W+R + + E+IQQ+
Sbjct: 356 EALENGPKESLPVIAAPSMWTRPQIKDFKEKIQQD 390
>BC034563-1|AAH34563.2| 360|Homo sapiens ACBD3 protein protein.
Length = 360
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 557 EAEYEGPDESEPDFLPPSLWSRHD-RVYNERIQQN 456
EA GP ES P PS+W+R + + E+IQQ+
Sbjct: 188 EALENGPKESLPVIAAPSMWTRPQIKDFKEKIQQD 222
>BC009518-1|AAH09518.1| 821|Homo sapiens coiled-coil domain
containing 45 protein.
Length = 821
Score = 30.3 bits (65), Expect = 8.0
Identities = 11/26 (42%), Positives = 21/26 (80%)
Frame = +1
Query: 265 SRALIVRISTFSLLPLKIDEFGFLYI 342
++A+ +++S SLLPL +++F FLY+
Sbjct: 553 NKAVPMKVSEHSLLPLMLEQFPFLYV 578
>AL592045-1|CAH71922.1| 528|Homo sapiens acyl-Coenzyme A binding
domain containing 3 protein.
Length = 528
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 557 EAEYEGPDESEPDFLPPSLWSRHD-RVYNERIQQN 456
EA GP ES P PS+W+R + + E+IQQ+
Sbjct: 356 EALENGPKESLPVIAAPSMWTRPQIKDFKEKIQQD 390
>AK057326-1|BAB71428.1| 607|Homo sapiens protein ( Homo sapiens
cDNA FLJ32764 fis, clone TESTI2001829. ).
Length = 607
Score = 30.3 bits (65), Expect = 8.0
Identities = 11/26 (42%), Positives = 21/26 (80%)
Frame = +1
Query: 265 SRALIVRISTFSLLPLKIDEFGFLYI 342
++A+ +++S SLLPL +++F FLY+
Sbjct: 553 NKAVPMKVSEHSLLPLMLEQFPFLYV 578
>AK025520-1|BAB15159.1| 528|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21867 fis, clone HEP02419. ).
Length = 528
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 557 EAEYEGPDESEPDFLPPSLWSRHD-RVYNERIQQN 456
EA GP ES P PS+W+R + + E+IQQ+
Sbjct: 356 EALENGPKESLPVIAAPSMWTRPQIKDFKEKIQQD 390
>AB043587-1|BAB20592.2| 528|Homo sapiens golgi resident protein
GCP60 protein.
Length = 528
Score = 30.3 bits (65), Expect = 8.0
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -1
Query: 557 EAEYEGPDESEPDFLPPSLWSRHD-RVYNERIQQN 456
EA GP ES P PS+W+R + + E+IQQ+
Sbjct: 356 EALENGPKESLPVIAAPSMWTRPQIKDFKEKIQQD 390
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,607,078
Number of Sequences: 237096
Number of extensions: 2357558
Number of successful extensions: 6077
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6077
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9311505506
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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