Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12i12
(790 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 25 0.61
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 25 0.61
AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 25 0.61
AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 25 0.61
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 25 0.80
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 24 1.4
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 24 1.4
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 23 2.4
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 23 3.2
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 3.2
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot... 22 5.7
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 9.9
>EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.61
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 214 QASSSMAKLRSDMKS*LRYTYNIPTSSIKHTKGMV 318
+A ++M K R + +TY+I +S K+ KGMV
Sbjct: 480 KAKNTMIKARQYRLNHKPFTYHIVVNSDKNVKGMV 514
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 25.4 bits (53), Expect = 0.61
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 337 STASNNAMPPFVEKSKLNAMQLRIRPATTNCS 432
+ +N PF+E+ N M + I+ T +CS
Sbjct: 67 NNVNNWLWTPFIERGPANRMYIEIKFTTRDCS 98
>AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.61
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 214 QASSSMAKLRSDMKS*LRYTYNIPTSSIKHTKGMV 318
+A ++M K R + +TY+I +S K+ KGMV
Sbjct: 480 KAKNTMIKARQYRLNHKPFTYHIVVNSDKNVKGMV 514
>AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein.
Length = 226
Score = 25.4 bits (53), Expect = 0.61
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +1
Query: 214 QASSSMAKLRSDMKS*LRYTYNIPTSSIKHTKGMV 318
+A ++M K R + +TY+I +S K+ KGMV
Sbjct: 106 KAKNTMIKARQYRLNHKPFTYHIVVNSDKNVKGMV 140
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 25.0 bits (52), Expect = 0.80
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 271 TYNIPTSSIKHTKGMVTPVFIDSTASNNAMPPFVEKSKLNAMQLRIRPAT 420
T N PT+S+ G P+ +S + VEK +N ++ +I T
Sbjct: 838 TINTPTTSVISMSGTTVPITSLPASSTSINSITVEKDVINDVKTQITTNT 887
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 265 RYTYNIPTSSIKHTKGMV 318
R+TY I +S K TKGM+
Sbjct: 500 RFTYKININSDKETKGMM 517
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 24.2 bits (50), Expect = 1.4
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 265 RYTYNIPTSSIKHTKGMV 318
R+TY I +S K TKGM+
Sbjct: 500 RFTYKININSDKETKGMM 517
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 23.4 bits (48), Expect = 2.4
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = +3
Query: 72 HHTAQGNYRHNN 107
HH+++ N RHNN
Sbjct: 451 HHSSKSNNRHNN 462
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 782 EGLESFASGHIDPDLNNENV 723
EGLE A G I +L +EN+
Sbjct: 241 EGLEEEAEGAITVELQSENI 260
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.0 bits (47), Expect = 3.2
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 782 EGLESFASGHIDPDLNNENV 723
EGLE A G I +L +EN+
Sbjct: 331 EGLEEEAEGAITVELQSENI 350
>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
protein.
Length = 1010
Score = 22.2 bits (45), Expect = 5.7
Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +1
Query: 211 EQASSSMAKLRSDMK--S*LRYTYNIPTSSIKHTKGMVTPVFIDSTASNNAMPPFVEKSK 384
+Q + +++R+ +K Y Y I S ++ G V VF+ + P + K++
Sbjct: 497 QQEEQTQSRVRAHLKRLDHQPYQYKIAVHSEQNVPGAVVRVFLGPKHDHQGRPISISKNQ 556
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.4 bits (43), Expect = 9.9
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = +2
Query: 638 LAVNNLQLHIKYLQQNATPLIVGLVQNAK 724
+A N++ LH+ P+I +V++ K
Sbjct: 1472 VATNSITLHLNAWSDGGCPMIYFVVEHKK 1500
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,500
Number of Sequences: 438
Number of extensions: 5539
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -