Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12i08
(752 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457294-1|CAG33575.1| 493|Homo sapiens C14orf133 protein. 61 4e-09
BC015054-1|AAH15054.1| 493|Homo sapiens chromosome 14 open read... 61 4e-09
AK024661-1|BAB14951.1| 163|Homo sapiens protein ( Homo sapiens ... 61 4e-09
AK022925-1|BAB14310.1| 493|Homo sapiens protein ( Homo sapiens ... 61 4e-09
AK022769-1|BAB14237.1| 493|Homo sapiens protein ( Homo sapiens ... 61 4e-09
AF111168-2|AAD09624.1| 480|Homo sapiens unknown protein. 61 4e-09
AK222706-1|BAD96426.1| 493|Homo sapiens chromosome 14 open read... 61 5e-09
BC122544-1|AAI22545.1| 211|Homo sapiens chromosome 8 open readi... 31 3.4
AK092777-1|BAC03974.1| 211|Homo sapiens protein ( Homo sapiens ... 31 3.4
BC101833-1|AAI01834.1| 157|Homo sapiens interleukin 1 family, m... 30 7.8
BC101831-1|AAI01832.1| 157|Homo sapiens interleukin 1 family, m... 30 7.8
BC044925-1|AAH44925.2| 830|Homo sapiens TLK2 protein protein. 30 7.8
AF201833-1|AAF25213.1| 157|Homo sapiens FIL1 eta protein. 30 7.8
>CR457294-1|CAG33575.1| 493|Homo sapiens C14orf133 protein.
Length = 493
Score = 61.3 bits (142), Expect = 4e-09
Identities = 35/116 (30%), Positives = 57/116 (49%)
Frame = -3
Query: 690 AKSGKWDILEXLFTKKDWLGRSTVSSHVPAQCLLRRLSELGASSRLMAACLAKLPSADER 511
AK W+ ++ LFT K+WLG + + + ++ L + A +++ + + D +
Sbjct: 378 AKLRAWNDVDALFTTKNWLGYTKKRAPIGFHRVVEILHKNNAPVQILQEYVNLVEDVDTK 437
Query: 510 LALALNYKVHCVVIQTYAKQKDRLALTNYKMTLNPQSEEYILAENTLRDPSIKWKN 343
L LA +K H VVI TY KDR L Y+ ++ S E + L I+WKN
Sbjct: 438 LNLATKFKCHDVVIDTYRDLKDRQQLLAYRSKVDKGSAEEEKIDALLSSSQIRWKN 493
>BC015054-1|AAH15054.1| 493|Homo sapiens chromosome 14 open reading
frame 133 protein.
Length = 493
Score = 61.3 bits (142), Expect = 4e-09
Identities = 35/116 (30%), Positives = 57/116 (49%)
Frame = -3
Query: 690 AKSGKWDILEXLFTKKDWLGRSTVSSHVPAQCLLRRLSELGASSRLMAACLAKLPSADER 511
AK W+ ++ LFT K+WLG + + + ++ L + A +++ + + D +
Sbjct: 378 AKLRAWNDVDALFTTKNWLGYTKKRAPIGFHRVVEILHKNNAPVQILQEYVNLVEDVDTK 437
Query: 510 LALALNYKVHCVVIQTYAKQKDRLALTNYKMTLNPQSEEYILAENTLRDPSIKWKN 343
L LA +K H VVI TY KDR L Y+ ++ S E + L I+WKN
Sbjct: 438 LNLATKFKCHDVVIDTYRDLKDRQQLLAYRSKVDKGSAEEEKIDALLSSSQIRWKN 493
>AK024661-1|BAB14951.1| 163|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21008 fis, clone CAE03926. ).
Length = 163
Score = 61.3 bits (142), Expect = 4e-09
Identities = 35/116 (30%), Positives = 57/116 (49%)
Frame = -3
Query: 690 AKSGKWDILEXLFTKKDWLGRSTVSSHVPAQCLLRRLSELGASSRLMAACLAKLPSADER 511
AK W+ ++ LFT K+WLG + + + ++ L + A +++ + + D +
Sbjct: 48 AKLRAWNDVDALFTTKNWLGYTKKRAPIGFHRVVEILHKNNAPVQILQEYVNLVEDVDTK 107
Query: 510 LALALNYKVHCVVIQTYAKQKDRLALTNYKMTLNPQSEEYILAENTLRDPSIKWKN 343
L LA +K H VVI TY KDR L Y+ ++ S E + L I+WKN
Sbjct: 108 LNLATKFKCHDVVIDTYRDLKDRQQLLAYRSKVDKGSAEEEKIDALLSSSQIRWKN 163
>AK022925-1|BAB14310.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ12863 fis, clone NT2RP2003581. ).
Length = 493
Score = 61.3 bits (142), Expect = 4e-09
Identities = 35/116 (30%), Positives = 57/116 (49%)
Frame = -3
Query: 690 AKSGKWDILEXLFTKKDWLGRSTVSSHVPAQCLLRRLSELGASSRLMAACLAKLPSADER 511
AK W+ ++ LFT K+WLG + + + ++ L + A +++ + + D +
Sbjct: 378 AKLRAWNDVDALFTTKNWLGYTKKRAPIGFHRVVEILHKNNAPVQILQEYVNLVEDVDTK 437
Query: 510 LALALNYKVHCVVIQTYAKQKDRLALTNYKMTLNPQSEEYILAENTLRDPSIKWKN 343
L LA +K H VVI TY KDR L Y+ ++ S E + L I+WKN
Sbjct: 438 LNLATKFKCHDVVIDTYRDLKDRQQLLAYRSKVDKGSAEEEKIDALLSSSQIRWKN 493
>AK022769-1|BAB14237.1| 493|Homo sapiens protein ( Homo sapiens
cDNA FLJ12707 fis, clone NT2RP1000916. ).
Length = 493
Score = 61.3 bits (142), Expect = 4e-09
Identities = 35/116 (30%), Positives = 57/116 (49%)
Frame = -3
Query: 690 AKSGKWDILEXLFTKKDWLGRSTVSSHVPAQCLLRRLSELGASSRLMAACLAKLPSADER 511
AK W+ ++ LFT K+WLG + + + ++ L + A +++ + + D +
Sbjct: 378 AKLRAWNDVDALFTTKNWLGYTKKRAPIGFHRVVEILHKNNAPVQILQEYVNLVEDVDTK 437
Query: 510 LALALNYKVHCVVIQTYAKQKDRLALTNYKMTLNPQSEEYILAENTLRDPSIKWKN 343
L LA +K H VVI TY KDR L Y+ ++ S E + L I+WKN
Sbjct: 438 LNLATKFKCHDVVIDTYRDLKDRQQLLAYRSKVDKGSAEEEKIDALLSSSQIRWKN 493
>AF111168-2|AAD09624.1| 480|Homo sapiens unknown protein.
Length = 480
Score = 61.3 bits (142), Expect = 4e-09
Identities = 35/116 (30%), Positives = 57/116 (49%)
Frame = -3
Query: 690 AKSGKWDILEXLFTKKDWLGRSTVSSHVPAQCLLRRLSELGASSRLMAACLAKLPSADER 511
AK W+ ++ LFT K+WLG + + + ++ L + A +++ + + D +
Sbjct: 365 AKLRAWNDVDALFTTKNWLGYTKKRAPIGFHRVVEILHKNNAPVQILQEYVNLVEDVDTK 424
Query: 510 LALALNYKVHCVVIQTYAKQKDRLALTNYKMTLNPQSEEYILAENTLRDPSIKWKN 343
L LA +K H VVI TY KDR L Y+ ++ S E + L I+WKN
Sbjct: 425 LNLATKFKCHDVVIDTYRDLKDRQQLLAYRSKVDKGSAEEEKIDALLSSSQIRWKN 480
>AK222706-1|BAD96426.1| 493|Homo sapiens chromosome 14 open reading
frame 133 variant protein.
Length = 493
Score = 60.9 bits (141), Expect = 5e-09
Identities = 35/116 (30%), Positives = 57/116 (49%)
Frame = -3
Query: 690 AKSGKWDILEXLFTKKDWLGRSTVSSHVPAQCLLRRLSELGASSRLMAACLAKLPSADER 511
AK W+ ++ LFT K+WLG + + + ++ L + A +++ + + D +
Sbjct: 378 AKLRAWNDVDALFTTKNWLGYTKKRAPIGFHRVVEILHKNNAPVQILQEYVNLVEDVDTK 437
Query: 510 LALALNYKVHCVVIQTYAKQKDRLALTNYKMTLNPQSEEYILAENTLRDPSIKWKN 343
L LA +K H VVI TY KDR L Y+ ++ S E + L I+WKN
Sbjct: 438 LNLATKFKCHDVVIDTYRDLKDRQQLLAYRSKVDKGSAEEEEIDALLSSSQIRWKN 493
>BC122544-1|AAI22545.1| 211|Homo sapiens chromosome 8 open reading
frame 77 protein.
Length = 211
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 360 KDPSACSRRVCTPRSEGSASSCSWLGPVGPFVSRKSVSPRSG 485
+DP + R C S G S CS GP P SR ++SP G
Sbjct: 39 RDPD--TERSCGRSSTGGCSPCSGPGPSSPRTSRGALSPSLG 78
>AK092777-1|BAC03974.1| 211|Homo sapiens protein ( Homo sapiens
cDNA FLJ35458 fis, clone SMINT2004729. ).
Length = 211
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 360 KDPSACSRRVCTPRSEGSASSCSWLGPVGPFVSRKSVSPRSG 485
+DP + R C S G S CS GP P SR ++SP G
Sbjct: 39 RDPD--TERSCGRSSTGGCSPCSGPGPSSPRTSRGALSPSLG 78
>BC101833-1|AAI01834.1| 157|Homo sapiens interleukin 1 family,
member 8 (eta) protein.
Length = 157
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 263 RGPPTAVLIFKIDITLILIKKGDVRY*FFHLIEGSLSVFSASMY 394
+G PT L K + L + KK + FFH EGS SVF + Y
Sbjct: 79 QGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSVSY 122
>BC101831-1|AAI01832.1| 157|Homo sapiens interleukin 1 family,
member 8 (eta) protein.
Length = 157
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 263 RGPPTAVLIFKIDITLILIKKGDVRY*FFHLIEGSLSVFSASMY 394
+G PT L K + L + KK + FFH EGS SVF + Y
Sbjct: 79 QGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSVSY 122
>BC044925-1|AAH44925.2| 830|Homo sapiens TLK2 protein protein.
Length = 830
Score = 30.3 bits (65), Expect = 7.8
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = -2
Query: 559 PAHGRLPRQAAER--RRTTRSGAQLQSPLRGDTDLRETKGPTGPNQL 425
PA G+ P E+ R++ +GA+ ++P G+T+L++T G + L
Sbjct: 406 PAMGQAPPATNEQKQRKSKTNGAENETPSSGNTELKDTAPALGAHSL 452
>AF201833-1|AAF25213.1| 157|Homo sapiens FIL1 eta protein.
Length = 157
Score = 30.3 bits (65), Expect = 7.8
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +2
Query: 263 RGPPTAVLIFKIDITLILIKKGDVRY*FFHLIEGSLSVFSASMY 394
+G PT L K + L + KK + FFH EGS SVF + Y
Sbjct: 79 QGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSVSY 122
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,778,002
Number of Sequences: 237096
Number of extensions: 1946499
Number of successful extensions: 4497
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4334
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4497
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9071127468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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