Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12i07
         (166 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y18460-1|CAA77178.1|  195|Homo sapiens cathepsin B protein.            51   8e-07
M14221-1|AAA52129.1|  339|Homo sapiens CTSB protein.                   51   8e-07
M13230-1|AAA52125.1|  209|Homo sapiens CTSB protein.                   51   8e-07
L16510-1|AAC37547.1|  339|Homo sapiens cathepsin B protein.            51   8e-07
BC095408-1|AAH95408.1|  339|Homo sapiens cathepsin B protein.          51   8e-07
BC010240-1|AAH10240.1|  339|Homo sapiens cathepsin B protein.          51   8e-07
AY082427-1|AAL99369.1|   37|Homo sapiens cathepsin B protein.          34   0.096
AY082426-1|AAL99368.1|   37|Homo sapiens cathepsin B protein.          34   0.096
BC015017-1|AAH15017.1|  468|Homo sapiens TAP binding protein-lik...    27   8.3  
AK223163-1|BAD96883.1|  468|Homo sapiens TAP binding protein-lik...    27   8.3  
AK222956-1|BAD96676.1|  468|Homo sapiens TAP binding protein-lik...    27   8.3  
AK002056-1|BAB41077.1|  468|Homo sapiens protein ( Homo sapiens ...    27   8.3  
AK001005-1|BAA91465.1|  468|Homo sapiens protein ( Homo sapiens ...    27   8.3  

>Y18460-1|CAA77178.1|  195|Homo sapiens cathepsin B protein.
          Length = 195

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = -3

Query: 113 SAEDLLSXC-PICGLGCSGGMPRLAWEYWKHFGXVSGG 3
           SAEDLL+ C  +CG GC+GG P  AW +W   G VSGG
Sbjct: 28  SAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGG 65


>M14221-1|AAA52129.1|  339|Homo sapiens CTSB protein.
          Length = 339

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = -3

Query: 113 SAEDLLSXC-PICGLGCSGGMPRLAWEYWKHFGXVSGG 3
           SAEDLL+ C  +CG GC+GG P  AW +W   G VSGG
Sbjct: 134 SAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGG 171


>M13230-1|AAA52125.1|  209|Homo sapiens CTSB protein.
          Length = 209

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = -3

Query: 113 SAEDLLSXC-PICGLGCSGGMPRLAWEYWKHFGXVSGG 3
           SAEDLL+ C  +CG GC+GG P  AW +W   G VSGG
Sbjct: 4   SAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGG 41


>L16510-1|AAC37547.1|  339|Homo sapiens cathepsin B protein.
          Length = 339

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = -3

Query: 113 SAEDLLSXC-PICGLGCSGGMPRLAWEYWKHFGXVSGG 3
           SAEDLL+ C  +CG GC+GG P  AW +W   G VSGG
Sbjct: 134 SAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGG 171


>BC095408-1|AAH95408.1|  339|Homo sapiens cathepsin B protein.
          Length = 339

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = -3

Query: 113 SAEDLLSXC-PICGLGCSGGMPRLAWEYWKHFGXVSGG 3
           SAEDLL+ C  +CG GC+GG P  AW +W   G VSGG
Sbjct: 134 SAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGG 171


>BC010240-1|AAH10240.1|  339|Homo sapiens cathepsin B protein.
          Length = 339

 Score = 50.8 bits (116), Expect = 8e-07
 Identities = 22/38 (57%), Positives = 26/38 (68%), Gaps = 1/38 (2%)
 Frame = -3

Query: 113 SAEDLLSXC-PICGLGCSGGMPRLAWEYWKHFGXVSGG 3
           SAEDLL+ C  +CG GC+GG P  AW +W   G VSGG
Sbjct: 134 SAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGG 171


>AY082427-1|AAL99369.1|   37|Homo sapiens cathepsin B protein.
          Length = 37

 Score = 33.9 bits (74), Expect = 0.096
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 68 CSGGMPRLAWEYWKHFGXVSGG 3
          C+GG P  AW +W   G VSGG
Sbjct: 1  CNGGYPAEAWNFWTRKGLVSGG 22


>AY082426-1|AAL99368.1|   37|Homo sapiens cathepsin B protein.
          Length = 37

 Score = 33.9 bits (74), Expect = 0.096
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 68 CSGGMPRLAWEYWKHFGXVSGG 3
          C+GG P  AW +W   G VSGG
Sbjct: 1  CNGGYPAEAWNFWTRKGLVSGG 22


>BC015017-1|AAH15017.1|  468|Homo sapiens TAP binding protein-like
           protein.
          Length = 468

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -2

Query: 93  LXPYLWTGMQRRNAETSLGILEALR 19
           L   ++ G+QRR A T LG+L+A R
Sbjct: 418 LLALMFLGLQRRQAPTGLGLLQAER 442


>AK223163-1|BAD96883.1|  468|Homo sapiens TAP binding protein-like
           variant protein.
          Length = 468

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -2

Query: 93  LXPYLWTGMQRRNAETSLGILEALR 19
           L   ++ G+QRR A T LG+L+A R
Sbjct: 418 LLALMFLGLQRRQAPTGLGLLQAER 442


>AK222956-1|BAD96676.1|  468|Homo sapiens TAP binding protein-like
           variant protein.
          Length = 468

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -2

Query: 93  LXPYLWTGMQRRNAETSLGILEALR 19
           L   ++ G+QRR A T LG+L+A R
Sbjct: 418 LLALMFLGLQRRQAPTGLGLLQAER 442


>AK002056-1|BAB41077.1|  468|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11194 fis, clone PLACE1007632, weakly similar to
           POLIOVIRUS RECEPTOR PRECURSOR. ).
          Length = 468

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -2

Query: 93  LXPYLWTGMQRRNAETSLGILEALR 19
           L   ++ G+QRR A T LG+L+A R
Sbjct: 418 LLALMFLGLQRRQAPTGLGLLQAER 442


>AK001005-1|BAA91465.1|  468|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10143 fis, clone HEMBA1003281, weakly similar to
           POLIOVIRUS RECEPTOR PRECURSOR. ).
          Length = 468

 Score = 27.5 bits (58), Expect = 8.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -2

Query: 93  LXPYLWTGMQRRNAETSLGILEALR 19
           L   ++ G+QRR A T LG+L+A R
Sbjct: 418 LLALMFLGLQRRQAPTGLGLLQAER 442


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,648,402
Number of Sequences: 237096
Number of extensions: 382732
Number of successful extensions: 1039
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1039
length of database: 76,859,062
effective HSP length: 34
effective length of database: 68,797,798
effective search space used: 1375955960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)