Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12i07
         (166 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    19   4.2  
DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.               19   4.2  
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    19   5.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    19   5.6  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              18   9.7  
AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          18   9.7  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       18   9.7  

>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = -3

Query: 59  GMPRLAWEYWKHFGXVSG 6
           G+P   +  W HF  V G
Sbjct: 106 GLPPEIYYIWSHFPYVFG 123


>DQ435326-1|ABD92641.1|  132|Apis mellifera OBP9 protein.
          Length = 132

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -1

Query: 121 FIFLPRICLVXALFVDWDAAEECR 50
           F F+  I L+   F + D  ++CR
Sbjct: 7   FFFILVITLIFLYFGEADIKKDCR 30


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 118 IFLPRICLVXALFVD 74
           IFLP  CL+  + +D
Sbjct: 124 IFLPEDCLLFTIELD 138


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 118 IFLPRICLVXALFVD 74
           IFLP  CL+  + +D
Sbjct: 139 IFLPEDCLLFTIELD 153


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = -3

Query: 89 CPICG 75
          CPICG
Sbjct: 75 CPICG 79


>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 5/6 (83%), Positives = 6/6 (100%)
 Frame = +1

Query: 55  IPPLHP 72
           +PPLHP
Sbjct: 101 LPPLHP 106


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = +1

Query: 31 QYSQASLGIPPLHPSPQIGXQ 93
          Q  Q S G P   PSP    Q
Sbjct: 12 QSQQPSSGAPGPQPSPHQSPQ 32


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,458
Number of Sequences: 438
Number of extensions: 693
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 34
effective length of database: 131,451
effective search space used:  2629020
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)