Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12i06
(799 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC030948-1|AAH30948.3| 334|Homo sapiens succinate receptor 1 pr... 33 0.90
AF348078-1|AAK29080.1| 330|Homo sapiens G-protein coupled recep... 33 0.90
AF247785-1|AAL95690.1| 334|Homo sapiens P2Y purinoceptor 1 prot... 33 0.90
BC112348-1|AAI12349.1| 390|Homo sapiens histamine receptor H4 p... 31 6.4
BC069136-1|AAH69136.1| 390|Homo sapiens histamine H4 receptor p... 31 6.4
AY136745-1|AAN01271.1| 390|Homo sapiens histamine receptor H4 p... 31 6.4
AJ298292-1|CAC83493.1| 390|Homo sapiens histamine receptor H4 p... 31 6.4
AF329449-1|AAK43542.1| 390|Homo sapiens histamine receptor H4 p... 31 6.4
AF325356-1|AAL01684.1| 390|Homo sapiens histamine receptor H4 p... 31 6.4
AF312230-1|AAK12081.1| 390|Homo sapiens histamine receptor H4 s... 31 6.4
AF307973-1|AAG32052.1| 390|Homo sapiens histamine H4 receptor p... 31 6.4
AB045370-1|BAB20091.1| 390|Homo sapiens histamine H4 receptor H... 31 6.4
AB044934-1|BAB13698.1| 390|Homo sapiens histamine H4 receptor p... 31 6.4
BC148251-1|AAI48252.1| 296|Homo sapiens SET domain containing 3... 30 8.4
BC142995-1|AAI42996.1| 594|Homo sapiens SET domain containing 3... 30 8.4
BC127625-1|AAI27626.1| 296|Homo sapiens SET domain containing 3... 30 8.4
BC127624-1|AAI27625.1| 296|Homo sapiens SET domain containing 3... 30 8.4
BC120968-1|AAI20969.1| 284|Homo sapiens SETD3 protein protein. 30 8.4
BC120967-1|AAI20968.1| 296|Homo sapiens SET domain containing 3... 30 8.4
BC066931-1|AAH66931.1| 292|Homo sapiens SETD3 protein protein. 30 8.4
BC009054-1|AAH09054.1| 214|Homo sapiens SETD3 protein protein. 30 8.4
AK026680-1|BAB15525.1| 512|Homo sapiens protein ( Homo sapiens ... 30 8.4
>BC030948-1|AAH30948.3| 334|Homo sapiens succinate receptor 1
protein.
Length = 334
Score = 33.5 bits (73), Expect = 0.90
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = -2
Query: 609 ILSSIDFYLSVIGNCLVFLGFV--IGKINSDNQYTF--FISNLLIL--LGHLVALMTELT 448
I I+F + V+GN +V G++ + NS N Y F +S+L L L L+
Sbjct: 28 IFYGIEFVVGVLGNTIVVYGYIFSLKNWNSSNIYLFNLSVSDLAFLCTLPMLIRSYANGN 87
Query: 447 TLYEDYLCLKN 415
+Y D LC+ N
Sbjct: 88 WIYGDVLCISN 98
>AF348078-1|AAK29080.1| 330|Homo sapiens G-protein coupled receptor
91 protein.
Length = 330
Score = 33.5 bits (73), Expect = 0.90
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = -2
Query: 609 ILSSIDFYLSVIGNCLVFLGFV--IGKINSDNQYTF--FISNLLIL--LGHLVALMTELT 448
I I+F + V+GN +V G++ + NS N Y F +S+L L L L+
Sbjct: 24 IFYGIEFVVGVLGNTIVVYGYIFSLKNWNSSNIYLFNLSVSDLAFLCTLPMLIRSYANGN 83
Query: 447 TLYEDYLCLKN 415
+Y D LC+ N
Sbjct: 84 WIYGDVLCISN 94
>AF247785-1|AAL95690.1| 334|Homo sapiens P2Y purinoceptor 1
protein.
Length = 334
Score = 33.5 bits (73), Expect = 0.90
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 6/71 (8%)
Frame = -2
Query: 609 ILSSIDFYLSVIGNCLVFLGFV--IGKINSDNQYTF--FISNLLIL--LGHLVALMTELT 448
I I+F + V+GN +V G++ + NS N Y F +S+L L L L+
Sbjct: 28 IFYGIEFVVGVLGNTIVVYGYIFSLKNWNSSNIYLFNLSVSDLAFLCTLPMLIRSYANGN 87
Query: 447 TLYEDYLCLKN 415
+Y D LC+ N
Sbjct: 88 WIYGDVLCISN 98
>BC112348-1|AAI12349.1| 390|Homo sapiens histamine receptor H4
protein.
Length = 390
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -2
Query: 654 MPQTNGC-QLRTKPRIILS---SIDFYLSVIGNCLVFLGFVIGKINSDNQYTFFISNLLI 487
MP TN L R+ L+ S+ + ++GN LV L FV+ K N ++ ++F NL I
Sbjct: 1 MPDTNSTINLSLSTRVTLAFFMSLVAFAIMLGNALVILAFVVDK-NLRHRSSYFFLNLAI 59
>BC069136-1|AAH69136.1| 390|Homo sapiens histamine H4 receptor
protein.
Length = 390
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -2
Query: 654 MPQTNGC-QLRTKPRIILS---SIDFYLSVIGNCLVFLGFVIGKINSDNQYTFFISNLLI 487
MP TN L R+ L+ S+ + ++GN LV L FV+ K N ++ ++F NL I
Sbjct: 1 MPDTNSTINLSLSTRVTLAFFMSLVAFAIMLGNALVILAFVVDK-NLRHRSSYFFLNLAI 59
>AY136745-1|AAN01271.1| 390|Homo sapiens histamine receptor H4
protein.
Length = 390
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -2
Query: 654 MPQTNGC-QLRTKPRIILS---SIDFYLSVIGNCLVFLGFVIGKINSDNQYTFFISNLLI 487
MP TN L R+ L+ S+ + ++GN LV L FV+ K N ++ ++F NL I
Sbjct: 1 MPDTNSTINLSLSTRVTLAFFMSLVAFAIMLGNALVILAFVVDK-NLRHRSSYFFLNLAI 59
>AJ298292-1|CAC83493.1| 390|Homo sapiens histamine receptor H4
protein.
Length = 390
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -2
Query: 654 MPQTNGC-QLRTKPRIILS---SIDFYLSVIGNCLVFLGFVIGKINSDNQYTFFISNLLI 487
MP TN L R+ L+ S+ + ++GN LV L FV+ K N ++ ++F NL I
Sbjct: 1 MPDTNSTINLSLSTRVTLAFFMSLVAFAIMLGNALVILAFVVDK-NLRHRSSYFFLNLAI 59
>AF329449-1|AAK43542.1| 390|Homo sapiens histamine receptor H4
protein.
Length = 390
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -2
Query: 654 MPQTNGC-QLRTKPRIILS---SIDFYLSVIGNCLVFLGFVIGKINSDNQYTFFISNLLI 487
MP TN L R+ L+ S+ + ++GN LV L FV+ K N ++ ++F NL I
Sbjct: 1 MPDTNSTINLSLSTRVTLAFFMSLVAFAIMLGNALVILAFVVDK-NLRHRSSYFFLNLAI 59
>AF325356-1|AAL01684.1| 390|Homo sapiens histamine receptor H4
protein.
Length = 390
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -2
Query: 654 MPQTNGC-QLRTKPRIILS---SIDFYLSVIGNCLVFLGFVIGKINSDNQYTFFISNLLI 487
MP TN L R+ L+ S+ + ++GN LV L FV+ K N ++ ++F NL I
Sbjct: 1 MPDTNSTINLSLSTRVTLAFFMSLVAFAIMLGNALVILAFVVDK-NLRHRSSYFFLNLAI 59
>AF312230-1|AAK12081.1| 390|Homo sapiens histamine receptor H4
subtype protein.
Length = 390
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -2
Query: 654 MPQTNGC-QLRTKPRIILS---SIDFYLSVIGNCLVFLGFVIGKINSDNQYTFFISNLLI 487
MP TN L R+ L+ S+ + ++GN LV L FV+ K N ++ ++F NL I
Sbjct: 1 MPDTNSTINLSLSTRVTLAFFMSLVAFAIMLGNALVILAFVVDK-NLRHRSSYFFLNLAI 59
>AF307973-1|AAG32052.1| 390|Homo sapiens histamine H4 receptor
protein.
Length = 390
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -2
Query: 654 MPQTNGC-QLRTKPRIILS---SIDFYLSVIGNCLVFLGFVIGKINSDNQYTFFISNLLI 487
MP TN L R+ L+ S+ + ++GN LV L FV+ K N ++ ++F NL I
Sbjct: 1 MPDTNSTINLSLSTRVTLAFFMSLVAFAIMLGNALVILAFVVDK-NLRHRSSYFFLNLAI 59
>AB045370-1|BAB20091.1| 390|Homo sapiens histamine H4 receptor HH4R
protein.
Length = 390
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -2
Query: 654 MPQTNGC-QLRTKPRIILS---SIDFYLSVIGNCLVFLGFVIGKINSDNQYTFFISNLLI 487
MP TN L R+ L+ S+ + ++GN LV L FV+ K N ++ ++F NL I
Sbjct: 1 MPDTNSTINLSLSTRVTLAFFMSLVAFAIMLGNALVILAFVVDK-NLRHRSSYFFLNLAI 59
>AB044934-1|BAB13698.1| 390|Homo sapiens histamine H4 receptor
protein.
Length = 390
Score = 30.7 bits (66), Expect = 6.4
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Frame = -2
Query: 654 MPQTNGC-QLRTKPRIILS---SIDFYLSVIGNCLVFLGFVIGKINSDNQYTFFISNLLI 487
MP TN L R+ L+ S+ + ++GN LV L FV+ K N ++ ++F NL I
Sbjct: 1 MPDTNSTINLSLSTRVTLAFFMSLVAFAIMLGNALVILAFVVDK-NLRHRSSYFFLNLAI 59
>BC148251-1|AAI48252.1| 296|Homo sapiens SET domain containing 3
protein.
Length = 296
Score = 30.3 bits (65), Expect = 8.4
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
Frame = +3
Query: 174 PHIQTAPRHSPEPLYNDLRKV----GTLL*HQIDHTLKDS------FSALFKFHSHVRSF 323
P+IQT P PLY + +V T H + K++ F + + H H
Sbjct: 174 PYIQTLPSEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKL 233
Query: 324 PYRNSFLYTRLKW 362
P ++SF Y +W
Sbjct: 234 PLKDSFTYEDYRW 246
>BC142995-1|AAI42996.1| 594|Homo sapiens SET domain containing 3
protein.
Length = 594
Score = 30.3 bits (65), Expect = 8.4
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
Frame = +3
Query: 174 PHIQTAPRHSPEPLYNDLRKV----GTLL*HQIDHTLKDS------FSALFKFHSHVRSF 323
P+IQT P PLY + +V T H + K++ F + + H H
Sbjct: 174 PYIQTLPSEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKL 233
Query: 324 PYRNSFLYTRLKW 362
P ++SF Y +W
Sbjct: 234 PLKDSFTYEDYRW 246
>BC127625-1|AAI27626.1| 296|Homo sapiens SET domain containing 3
protein.
Length = 296
Score = 30.3 bits (65), Expect = 8.4
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
Frame = +3
Query: 174 PHIQTAPRHSPEPLYNDLRKV----GTLL*HQIDHTLKDS------FSALFKFHSHVRSF 323
P+IQT P PLY + +V T H + K++ F + + H H
Sbjct: 174 PYIQTLPSEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKL 233
Query: 324 PYRNSFLYTRLKW 362
P ++SF Y +W
Sbjct: 234 PLKDSFTYEDYRW 246
>BC127624-1|AAI27625.1| 296|Homo sapiens SET domain containing 3
protein.
Length = 296
Score = 30.3 bits (65), Expect = 8.4
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
Frame = +3
Query: 174 PHIQTAPRHSPEPLYNDLRKV----GTLL*HQIDHTLKDS------FSALFKFHSHVRSF 323
P+IQT P PLY + +V T H + K++ F + + H H
Sbjct: 174 PYIQTLPSEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKL 233
Query: 324 PYRNSFLYTRLKW 362
P ++SF Y +W
Sbjct: 234 PLKDSFTYEDYRW 246
>BC120968-1|AAI20969.1| 284|Homo sapiens SETD3 protein protein.
Length = 284
Score = 30.3 bits (65), Expect = 8.4
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
Frame = +3
Query: 174 PHIQTAPRHSPEPLYNDLRKV----GTLL*HQIDHTLKDS------FSALFKFHSHVRSF 323
P+IQT P PLY + +V T H + K++ F + + H H
Sbjct: 174 PYIQTLPSEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKL 233
Query: 324 PYRNSFLYTRLKW 362
P ++SF Y +W
Sbjct: 234 PLKDSFTYEDYRW 246
>BC120967-1|AAI20968.1| 296|Homo sapiens SET domain containing 3
protein.
Length = 296
Score = 30.3 bits (65), Expect = 8.4
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
Frame = +3
Query: 174 PHIQTAPRHSPEPLYNDLRKV----GTLL*HQIDHTLKDS------FSALFKFHSHVRSF 323
P+IQT P PLY + +V T H + K++ F + + H H
Sbjct: 174 PYIQTLPSEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKL 233
Query: 324 PYRNSFLYTRLKW 362
P ++SF Y +W
Sbjct: 234 PLKDSFTYEDYRW 246
>BC066931-1|AAH66931.1| 292|Homo sapiens SETD3 protein protein.
Length = 292
Score = 30.3 bits (65), Expect = 8.4
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
Frame = +3
Query: 174 PHIQTAPRHSPEPLYNDLRKV----GTLL*HQIDHTLKDS------FSALFKFHSHVRSF 323
P+IQT P PLY + +V T H + K++ F + + H H
Sbjct: 174 PYIQTLPSEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKL 233
Query: 324 PYRNSFLYTRLKW 362
P ++SF Y +W
Sbjct: 234 PLKDSFTYEDYRW 246
>BC009054-1|AAH09054.1| 214|Homo sapiens SETD3 protein protein.
Length = 214
Score = 30.3 bits (65), Expect = 8.4
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
Frame = +3
Query: 174 PHIQTAPRHSPEPLYNDLRKV----GTLL*HQIDHTLKDS------FSALFKFHSHVRSF 323
P+IQT P PLY + +V T H + K++ F + + H H
Sbjct: 92 PYIQTLPSEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKL 151
Query: 324 PYRNSFLYTRLKW 362
P ++SF Y +W
Sbjct: 152 PLKDSFTYEDYRW 164
>AK026680-1|BAB15525.1| 512|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23027 fis, clone LNG01826. ).
Length = 512
Score = 30.3 bits (65), Expect = 8.4
Identities = 20/73 (27%), Positives = 31/73 (42%), Gaps = 10/73 (13%)
Frame = +3
Query: 174 PHIQTAPRHSPEPLYNDLRKV----GTLL*HQIDHTLKDS------FSALFKFHSHVRSF 323
P+IQT P PLY + +V T H + K++ F + + H H
Sbjct: 92 PYIQTLPSEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYAYFYKVIQTHPHANKL 151
Query: 324 PYRNSFLYTRLKW 362
P ++SF Y +W
Sbjct: 152 PLKDSFTYEDYRW 164
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,349,863
Number of Sequences: 237096
Number of extensions: 2387957
Number of successful extensions: 7462
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 7328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7449
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9813323168
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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