Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12i01
(809 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y17975-1|CAA76984.1| 100|Homo sapiens putative vacuolar proton ... 60 9e-09
BC084541-1|AAH84541.1| 350|Homo sapiens ATPase, H+ transporting... 60 9e-09
BC010395-1|AAH10395.1| 99|Homo sapiens ATP6AP2 protein protein. 60 9e-09
AY429341-1|AAR06910.1| 338|Homo sapiens embryonic liver differe... 60 9e-09
AY038990-1|AAK83467.1| 350|Homo sapiens ER-localized type I tra... 60 9e-09
AK075382-1|BAC11582.1| 350|Homo sapiens protein ( Homo sapiens ... 60 9e-09
AF291814-1|AAM47531.1| 350|Homo sapiens renin receptor protein. 60 9e-09
AF248966-1|AAG44564.1| 350|Homo sapiens HT028 protein. 60 9e-09
S83366-1|AAN86712.1| 43|Homo sapiens orf1/unknown protein. 33 1.6
>Y17975-1|CAA76984.1| 100|Homo sapiens putative vacuolar proton
ATPase membrane sector associated protein M8-9 protein.
Length = 100
Score = 60.1 bits (139), Expect = 9e-09
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = -3
Query: 789 ASQRSMRMVYSADYAAIFNIILWFGVVFTFTLIAIVYALMDMDPGRDSIIYRMTNTRMKK 610
AS ++ Y+ +Y+ +FN++LW + +I Y + +MDPG DSIIYRMTN +++
Sbjct: 40 ASPYNLAYKYNFEYSVVFNMVLWIMIALALAVIITSYNIWNMDPGYDSIIYRMTNQKIRM 99
Query: 609 D 607
D
Sbjct: 100 D 100
>BC084541-1|AAH84541.1| 350|Homo sapiens ATPase, H+ transporting,
lysosomal accessory protein 2 protein.
Length = 350
Score = 60.1 bits (139), Expect = 9e-09
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = -3
Query: 789 ASQRSMRMVYSADYAAIFNIILWFGVVFTFTLIAIVYALMDMDPGRDSIIYRMTNTRMKK 610
AS ++ Y+ +Y+ +FN++LW + +I Y + +MDPG DSIIYRMTN +++
Sbjct: 290 ASPYNLAYKYNFEYSVVFNMVLWIMIALALAVIITSYNIWNMDPGYDSIIYRMTNQKIRM 349
Query: 609 D 607
D
Sbjct: 350 D 350
>BC010395-1|AAH10395.1| 99|Homo sapiens ATP6AP2 protein protein.
Length = 99
Score = 60.1 bits (139), Expect = 9e-09
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = -3
Query: 789 ASQRSMRMVYSADYAAIFNIILWFGVVFTFTLIAIVYALMDMDPGRDSIIYRMTNTRMKK 610
AS ++ Y+ +Y+ +FN++LW + +I Y + +MDPG DSIIYRMTN +++
Sbjct: 39 ASPYNLAYKYNFEYSVVFNMVLWIMIALALAVIITSYNIWNMDPGYDSIIYRMTNQKIRM 98
Query: 609 D 607
D
Sbjct: 99 D 99
>AY429341-1|AAR06910.1| 338|Homo sapiens embryonic liver
differentiation factor 10 protein.
Length = 338
Score = 60.1 bits (139), Expect = 9e-09
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = -3
Query: 789 ASQRSMRMVYSADYAAIFNIILWFGVVFTFTLIAIVYALMDMDPGRDSIIYRMTNTRMKK 610
AS ++ Y+ +Y+ +FN++LW + +I Y + +MDPG DSIIYRMTN +++
Sbjct: 278 ASPYNLAYKYNFEYSVVFNMVLWIMIALALAVIITSYNIWNMDPGYDSIIYRMTNQKIRM 337
Query: 609 D 607
D
Sbjct: 338 D 338
>AY038990-1|AAK83467.1| 350|Homo sapiens ER-localized type I
transmembrane adaptor precursor protein.
Length = 350
Score = 60.1 bits (139), Expect = 9e-09
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = -3
Query: 789 ASQRSMRMVYSADYAAIFNIILWFGVVFTFTLIAIVYALMDMDPGRDSIIYRMTNTRMKK 610
AS ++ Y+ +Y+ +FN++LW + +I Y + +MDPG DSIIYRMTN +++
Sbjct: 290 ASPYNLAYKYNFEYSVVFNMVLWIMIALALAVIITSYNIWNMDPGYDSIIYRMTNQKIRM 349
Query: 609 D 607
D
Sbjct: 350 D 350
>AK075382-1|BAC11582.1| 350|Homo sapiens protein ( Homo sapiens
cDNA PSEC0072 fis, clone NT2RP2002429, highly similar to
ATPase, H+ transporting, lysosomal accessory protein 2.
).
Length = 350
Score = 60.1 bits (139), Expect = 9e-09
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = -3
Query: 789 ASQRSMRMVYSADYAAIFNIILWFGVVFTFTLIAIVYALMDMDPGRDSIIYRMTNTRMKK 610
AS ++ Y+ +Y+ +FN++LW + +I Y + +MDPG DSIIYRMTN +++
Sbjct: 290 ASPYNLAYKYNFEYSVVFNMVLWIMIALALAVIITSYNIWNMDPGYDSIIYRMTNQKIRM 349
Query: 609 D 607
D
Sbjct: 350 D 350
>AF291814-1|AAM47531.1| 350|Homo sapiens renin receptor protein.
Length = 350
Score = 60.1 bits (139), Expect = 9e-09
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = -3
Query: 789 ASQRSMRMVYSADYAAIFNIILWFGVVFTFTLIAIVYALMDMDPGRDSIIYRMTNTRMKK 610
AS ++ Y+ +Y+ +FN++LW + +I Y + +MDPG DSIIYRMTN +++
Sbjct: 290 ASPYNLAYKYNFEYSVVFNMVLWIMIALALAVIITSYNIWNMDPGYDSIIYRMTNQKIRM 349
Query: 609 D 607
D
Sbjct: 350 D 350
>AF248966-1|AAG44564.1| 350|Homo sapiens HT028 protein.
Length = 350
Score = 60.1 bits (139), Expect = 9e-09
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = -3
Query: 789 ASQRSMRMVYSADYAAIFNIILWFGVVFTFTLIAIVYALMDMDPGRDSIIYRMTNTRMKK 610
AS ++ Y+ +Y+ +FN++LW + +I Y + +MDPG DSIIYRMTN +++
Sbjct: 290 ASPYNLAYKYNFEYSVVFNMVLWIMIALALAVIITSYNIWNMDPGYDSIIYRMTNQKIRM 349
Query: 609 D 607
D
Sbjct: 350 D 350
>S83366-1|AAN86712.1| 43|Homo sapiens orf1/unknown protein.
Length = 43
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 20 LSYNNYTLINLCIRTDKLFWRDLFYT 97
L+Y N +IN+C + FW DLFY+
Sbjct: 17 LTYRNCVMINVCYLKPQSFWGDLFYS 42
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,696,136
Number of Sequences: 237096
Number of extensions: 2423142
Number of successful extensions: 11447
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11436
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10036353240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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