Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12h04
(648 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457128-1|CAG33409.1| 519|Homo sapiens LAP3 protein. 162 8e-40
BC065564-1|AAH65564.1| 519|Homo sapiens leucine aminopeptidase ... 162 8e-40
BC006199-1|AAH06199.3| 503|Homo sapiens LAP3 protein protein. 162 8e-40
AF061738-1|AAD17527.1| 519|Homo sapiens leucine aminopeptidase ... 162 8e-40
BC020507-1|AAH20507.2| 523|Homo sapiens aminopeptidase-like 1 p... 52 2e-06
AK223094-1|BAD96814.1| 523|Homo sapiens aminopeptidase-like 1 v... 52 2e-06
AK021645-1|BAB13861.1| 411|Homo sapiens protein ( Homo sapiens ... 50 7e-06
AB075854-1|BAB85560.1| 362|Homo sapiens KIAA1974 protein protein. 48 4e-05
AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein. 33 1.2
M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein. 32 2.0
M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-bindi... 32 2.0
AK125668-1|BAC86238.1| 130|Homo sapiens protein ( Homo sapiens ... 31 2.7
CR456497-1|CAG30383.1| 422|Homo sapiens GPR24 protein. 31 3.5
BT006725-1|AAP35371.1| 422|Homo sapiens G protein-coupled recep... 31 3.5
BC021146-1|AAH21146.1| 422|Homo sapiens melanin-concentrating h... 31 3.5
BC001736-1|AAH01736.1| 422|Homo sapiens melanin-concentrating h... 31 3.5
AY747629-1|AAV98053.1| 296|Homo sapiens G-protein coupled recep... 31 3.5
AY562945-1|AAS72373.1| 422|Homo sapiens melanin-concentrating h... 31 3.5
AF514420-1|AAQ08117.1| 164|Homo sapiens lung carcinoma-associat... 31 3.5
BC067812-1|AAH67812.1| 526|Homo sapiens cyclin L1 protein. 31 4.7
BC007081-1|AAH07081.1| 526|Homo sapiens cyclin L1 protein. 31 4.7
AY358663-1|AAQ89026.1| 299|Homo sapiens CCNL1 protein. 31 4.7
AF180920-1|AAD53184.1| 526|Homo sapiens cyclin L ania-6a protein. 31 4.7
U03464-1|AAB52902.1| 1465|Homo sapiens ATP7B protein. 30 6.2
BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) ... 30 6.2
BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein. 30 6.2
BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein. 30 6.2
BC008208-1|AAH08208.1| 208|Homo sapiens DDX42 protein protein. 30 6.2
AB209461-1|BAD92698.1| 662|Homo sapiens ATPase, Cu++ transporti... 30 6.2
AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related pr... 30 6.2
>CR457128-1|CAG33409.1| 519|Homo sapiens LAP3 protein.
Length = 519
Score = 162 bits (394), Expect = 8e-40
Identities = 84/188 (44%), Positives = 117/188 (62%), Gaps = 2/188 (1%)
Frame = -3
Query: 637 AEXQVPINVCAVIPICENMVSGQCMKVGDVVRALNGLSIQIEDTDMEGRLMLADALVYGQ 458
A+ +PIN+ + P+CENM SG+ K GDVVRA NG +IQ+++TD EGRL+LADAL Y
Sbjct: 320 AKLNLPINIIGLAPLCENMPSGKANKPGDVVRAKNGKTIQVDNTDAEGRLILADALCYAH 379
Query: 457 AVHKPELVIDVATFTRGVLQALGGAACGCYTESEALWRDVTAAGARSGDRAWRLPLWDYY 278
+ P+++++ AT T + ALG A G +T S LW + A +GDR WR+PL+++Y
Sbjct: 380 TFN-PKVILNAATLTGAMDVALGSGATGVFTNSSWLWNKLFEASIETGDRVWRMPLFEHY 438
Query: 277 RRQITDDPSVDLRNKGSGK-ATSCLGAAFLKSFVC-CSWLHVDTTGVGKLAHGSAPPYLS 104
RQ+ D D+ N G + A +C AAFLK FV W H+D GV + + PYL
Sbjct: 439 TRQVVDCQLADVNNIGKYRSAGACTAAAFLKEFVTHPKWAHLDIAGV--MTNKDEVPYL- 495
Query: 103 ARRMTGRP 80
+ MTGRP
Sbjct: 496 RKGMTGRP 503
>BC065564-1|AAH65564.1| 519|Homo sapiens leucine aminopeptidase 3
protein.
Length = 519
Score = 162 bits (394), Expect = 8e-40
Identities = 84/188 (44%), Positives = 117/188 (62%), Gaps = 2/188 (1%)
Frame = -3
Query: 637 AEXQVPINVCAVIPICENMVSGQCMKVGDVVRALNGLSIQIEDTDMEGRLMLADALVYGQ 458
A+ +PIN+ + P+CENM SG+ K GDVVRA NG +IQ+++TD EGRL+LADAL Y
Sbjct: 320 AKLNLPINIIGLAPLCENMPSGKANKPGDVVRAKNGKTIQVDNTDAEGRLILADALCYAH 379
Query: 457 AVHKPELVIDVATFTRGVLQALGGAACGCYTESEALWRDVTAAGARSGDRAWRLPLWDYY 278
+ P+++++ AT T + ALG A G +T S LW + A +GDR WR+PL+++Y
Sbjct: 380 TFN-PKVILNAATLTGAMDVALGSGATGVFTNSSWLWNKLFEASIETGDRVWRMPLFEHY 438
Query: 277 RRQITDDPSVDLRNKGSGK-ATSCLGAAFLKSFVC-CSWLHVDTTGVGKLAHGSAPPYLS 104
RQ+ D D+ N G + A +C AAFLK FV W H+D GV + + PYL
Sbjct: 439 TRQVVDCQLADVNNIGKYRSAGACTAAAFLKEFVTHPKWAHLDIAGV--MTNKDEVPYL- 495
Query: 103 ARRMTGRP 80
+ MTGRP
Sbjct: 496 RKGMTGRP 503
>BC006199-1|AAH06199.3| 503|Homo sapiens LAP3 protein protein.
Length = 503
Score = 162 bits (394), Expect = 8e-40
Identities = 84/188 (44%), Positives = 117/188 (62%), Gaps = 2/188 (1%)
Frame = -3
Query: 637 AEXQVPINVCAVIPICENMVSGQCMKVGDVVRALNGLSIQIEDTDMEGRLMLADALVYGQ 458
A+ +PIN+ + P+CENM SG+ K GDVVRA NG +IQ+++TD EGRL+LADAL Y
Sbjct: 304 AKLNLPINIIGLAPLCENMPSGKANKPGDVVRAKNGKTIQVDNTDAEGRLILADALCYAH 363
Query: 457 AVHKPELVIDVATFTRGVLQALGGAACGCYTESEALWRDVTAAGARSGDRAWRLPLWDYY 278
+ P+++++ AT T + ALG A G +T S LW + A +GDR WR+PL+++Y
Sbjct: 364 TFN-PKVILNAATLTGAMDVALGSGATGVFTNSSWLWNKLFEASIETGDRVWRMPLFEHY 422
Query: 277 RRQITDDPSVDLRNKGSGK-ATSCLGAAFLKSFVC-CSWLHVDTTGVGKLAHGSAPPYLS 104
RQ+ D D+ N G + A +C AAFLK FV W H+D GV + + PYL
Sbjct: 423 TRQVVDCQLADVNNIGKYRSAGACTAAAFLKEFVTHPKWAHLDIAGV--MTNKDEVPYL- 479
Query: 103 ARRMTGRP 80
+ MTGRP
Sbjct: 480 RKGMTGRP 487
>AF061738-1|AAD17527.1| 519|Homo sapiens leucine aminopeptidase
protein.
Length = 519
Score = 162 bits (394), Expect = 8e-40
Identities = 84/188 (44%), Positives = 117/188 (62%), Gaps = 2/188 (1%)
Frame = -3
Query: 637 AEXQVPINVCAVIPICENMVSGQCMKVGDVVRALNGLSIQIEDTDMEGRLMLADALVYGQ 458
A+ +PIN+ + P+CENM SG+ K GDVVRA NG +IQ+++TD EGRL+LADAL Y
Sbjct: 320 AKLNLPINIIGLAPLCENMPSGKANKPGDVVRAKNGKTIQVDNTDAEGRLILADALCYAH 379
Query: 457 AVHKPELVIDVATFTRGVLQALGGAACGCYTESEALWRDVTAAGARSGDRAWRLPLWDYY 278
+ P+++++ AT T + ALG A G +T S LW + A +GDR WR+PL+++Y
Sbjct: 380 TFN-PKVILNAATLTGAMDVALGSGATGVFTNSSWLWNKLFEASIETGDRVWRMPLFEHY 438
Query: 277 RRQITDDPSVDLRNKGSGK-ATSCLGAAFLKSFVC-CSWLHVDTTGVGKLAHGSAPPYLS 104
RQ+ D D+ N G + A +C AAFLK FV W H+D GV + + PYL
Sbjct: 439 TRQVVDCQLADVNNIGKYRSAGACTAAAFLKEFVTHPKWAHLDIAGV--MTNKDEVPYL- 495
Query: 103 ARRMTGRP 80
+ MTGRP
Sbjct: 496 RKGMTGRP 503
>BC020507-1|AAH20507.2| 523|Homo sapiens aminopeptidase-like 1
protein.
Length = 523
Score = 51.6 bits (118), Expect = 2e-06
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Frame = -3
Query: 616 NVCAVIPICENMVSGQCMKVGDVVRALNGLSIQIEDTDMEGRLMLADALVYGQAVHKPEL 437
N+ AV + EN V + D+ +G +++I +TD EGRL+LAD + Y ++
Sbjct: 305 NLHAVFCLAENSVGPNATRPDDIHLLYSGKTVEINNTDAEGRLVLADGVSYACKDLGADI 364
Query: 436 VIDVATFTRGVLQALGGAACGCYTESEALWRDVTAAGARSGDRAWRLPLWDYYRRQITDD 257
++D+AT T A G T S AG + GD L
Sbjct: 365 ILDMATLTGAQGIATGKYHAAVLTNSAEWEAACVKAGRKCGDLVHPLVYCPELHFSEFTS 424
Query: 256 PSVDLRNKGSGK---ATSCLGAAFLKSFVCCSW 167
D++N + + +SC G F+ S + W
Sbjct: 425 AVADMKNSVADRDNSPSSCAG-LFIASHIGFDW 456
>AK223094-1|BAD96814.1| 523|Homo sapiens aminopeptidase-like 1
variant protein.
Length = 523
Score = 51.6 bits (118), Expect = 2e-06
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 3/153 (1%)
Frame = -3
Query: 616 NVCAVIPICENMVSGQCMKVGDVVRALNGLSIQIEDTDMEGRLMLADALVYGQAVHKPEL 437
N+ AV + EN V + D+ +G +++I +TD EGRL+LAD + Y ++
Sbjct: 305 NLHAVFCLAENSVGPNATRPDDIHLLYSGKTVEINNTDAEGRLVLADGVSYACKDLGADI 364
Query: 436 VIDVATFTRGVLQALGGAACGCYTESEALWRDVTAAGARSGDRAWRLPLWDYYRRQITDD 257
++D+AT T A G T S AG + GD L
Sbjct: 365 ILDMATLTGAQGIATGKYHAAVLTNSAEWEAACVKAGRKCGDLVHPLVYCPELHFSEFTS 424
Query: 256 PSVDLRNKGSGK---ATSCLGAAFLKSFVCCSW 167
D++N + + +SC G F+ S + W
Sbjct: 425 AVADMKNSVADRDNSPSSCAG-LFIASHIGFDW 456
>AK021645-1|BAB13861.1| 411|Homo sapiens protein ( Homo sapiens
cDNA FLJ11583 fis, clone HEMBA1003680, weakly similar to
PUTATIVE AMINOPEPTIDASE ZK353.6 IN CHROMOSOME III (EC
3.4.11.-). ).
Length = 411
Score = 50.0 bits (114), Expect = 7e-06
Identities = 40/153 (26%), Positives = 63/153 (41%), Gaps = 3/153 (1%)
Frame = -3
Query: 616 NVCAVIPICENMVSGQCMKVGDVVRALNGLSIQIEDTDMEGRLMLADALVYGQAVHKPEL 437
N+ AV + EN V D+ +G +++I +TD EGRL+LAD + Y ++
Sbjct: 193 NLHAVFCLAENSVGPNATGPDDIHLLYSGKTVEINNTDAEGRLVLADGVSYACKDLGADI 252
Query: 436 VIDVATFTRGVLQALGGAACGCYTESEALWRDVTAAGARSGDRAWRLPLWDYYRRQITDD 257
++D+AT T A G T S AG + GD L
Sbjct: 253 ILDMATLTGAQGIATGKYHAAVLTNSAEWEAACVKAGRKCGDLVHPLVYCPELHFSEFTS 312
Query: 256 PSVDLRNKGSGK---ATSCLGAAFLKSFVCCSW 167
D++N + + +SC G F+ S + W
Sbjct: 313 AVADMKNSVADRDNSPSSCAG-LFIASHIGFDW 344
>AB075854-1|BAB85560.1| 362|Homo sapiens KIAA1974 protein protein.
Length = 362
Score = 47.6 bits (108), Expect = 4e-05
Identities = 24/74 (32%), Positives = 41/74 (55%)
Frame = -3
Query: 616 NVCAVIPICENMVSGQCMKVGDVVRALNGLSIQIEDTDMEGRLMLADALVYGQAVHKPEL 437
N+ AV + EN V + D+ +G +++I +TD EGRL+LAD + Y ++
Sbjct: 255 NLHAVFCLAENSVGPNATRPDDIHLLYSGKTVEINNTDAEGRLVLADGVSYACKDLGADI 314
Query: 436 VIDVATFTRGVLQA 395
++D+AT T + A
Sbjct: 315 ILDMATLTGAQVSA 328
>AL356504-1|CAI19595.1| 4061|Homo sapiens filaggrin protein.
Length = 4061
Score = 32.7 bits (71), Expect = 1.2
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 4/39 (10%)
Frame = -2
Query: 566 HEGRRRRQSSQRTLHPDRRH----GHGGPADAGRRSGVR 462
H G + QS + HP H GHG AD+ R+SG R
Sbjct: 645 HHGSAQEQSRDGSRHPRSHHEDRAGHGHSADSSRKSGTR 683
>M60503-1|AAA63243.1| 1084|Homo sapiens profilaggrin protein.
Length = 1084
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = -2
Query: 566 HEGRRRRQSSQRTLHPDRRH----GHGGPADAGRRSGVR 462
H G R QS + HP H GHG AD+ +SG R
Sbjct: 260 HRGSAREQSRDGSRHPGSHHEDRAGHGHSADSSXQSGTR 298
>M24070-1|AAA35750.1| 364|Homo sapiens protein ( Human DNA-binding
protein B (dbpB) gene, 3' end. ).
Length = 364
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 315 PERAPAAVTSRHSASLSV*QPHAAPPSACSTPLVKVATSMTSSGLWTACP 464
P+ AP +T+ S+ QP AAPP+A + T SG + P
Sbjct: 30 PQPAPVTITATMSSEAETQQPPAAPPAAPALSAADTKPGTTGSGAGSGGP 79
>AK125668-1|BAC86238.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ43680 fis, clone TBAES2001220. ).
Length = 130
Score = 31.5 bits (68), Expect = 2.7
Identities = 26/76 (34%), Positives = 29/76 (38%), Gaps = 1/76 (1%)
Frame = -3
Query: 412 RGVLQALGGAACGCYTESEALWRDVTAAGARSGDRAWRLPLWDYYRRQITDDPSVDLRNK 233
RG ALG CG +T S R V + G R W PLW R Q P +
Sbjct: 39 RGRSSALG-PLCGSWTRSREPQRPVPSPRGDLGPRPWS-PLWAALRPQPRVSPDCSVTAG 96
Query: 232 GS-GKATSCLGAAFLK 188
GS G S G K
Sbjct: 97 GSWGDPISVCGVCAFK 112
>CR456497-1|CAG30383.1| 422|Homo sapiens GPR24 protein.
Length = 422
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -3
Query: 433 IDVATFTRGVLQALG-GAACGCYTESEALWRDVTAAGARSGDRAWRLP 293
+ V +GV +A+G G GC E D A G R WRLP
Sbjct: 1 MSVGAMKKGVGRAVGLGGGSGCQATEEDPLPDCGACAPGQGGRRWRLP 48
>BT006725-1|AAP35371.1| 422|Homo sapiens G protein-coupled receptor
24 protein.
Length = 422
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -3
Query: 433 IDVATFTRGVLQALG-GAACGCYTESEALWRDVTAAGARSGDRAWRLP 293
+ V +GV +A+G G GC E D A G R WRLP
Sbjct: 1 MSVGAMKKGVGRAVGLGGGSGCQATEEDPLPDCGACAPGQGGRRWRLP 48
>BC021146-1|AAH21146.1| 422|Homo sapiens melanin-concentrating
hormone receptor 1 protein.
Length = 422
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -3
Query: 433 IDVATFTRGVLQALG-GAACGCYTESEALWRDVTAAGARSGDRAWRLP 293
+ V +GV +A+G G GC E D A G R WRLP
Sbjct: 1 MSVGAMKKGVGRAVGLGGGSGCQATEEDPLPDCGACAPGQGGRRWRLP 48
>BC001736-1|AAH01736.1| 422|Homo sapiens melanin-concentrating
hormone receptor 1 protein.
Length = 422
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -3
Query: 433 IDVATFTRGVLQALG-GAACGCYTESEALWRDVTAAGARSGDRAWRLP 293
+ V +GV +A+G G GC E D A G R WRLP
Sbjct: 1 MSVGAMKKGVGRAVGLGGGSGCQATEEDPLPDCGACAPGQGGRRWRLP 48
>AY747629-1|AAV98053.1| 296|Homo sapiens G-protein coupled receptor
24 isoform 1 protein.
Length = 296
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -3
Query: 433 IDVATFTRGVLQALG-GAACGCYTESEALWRDVTAAGARSGDRAWRLP 293
+ V +GV +A+G G GC E D A G R WRLP
Sbjct: 1 MSVGAMKKGVGRAVGLGGGSGCQATEEDPLPDCGACAPGQGGRRWRLP 48
>AY562945-1|AAS72373.1| 422|Homo sapiens melanin-concentrating
hormone receptor 1 protein.
Length = 422
Score = 31.1 bits (67), Expect = 3.5
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Frame = -3
Query: 433 IDVATFTRGVLQALG-GAACGCYTESEALWRDVTAAGARSGDRAWRLP 293
+ V +GV +A+G G GC E D A G R WRLP
Sbjct: 1 MSVGAMKKGVGRAVGLGGGSGCQATEEDPLPDCGACAPGQGGRRWRLP 48
>AF514420-1|AAQ08117.1| 164|Homo sapiens lung carcinoma-associated
protein protein.
Length = 164
Score = 31.1 bits (67), Expect = 3.5
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = -2
Query: 539 SQRTLHPDRRHGHGGPADAGRRSGVRAGR 453
S R PD RHG G ++AG R RAGR
Sbjct: 69 SPRCPEPDARHGWGSGSNAGYRGPDRAGR 97
>BC067812-1|AAH67812.1| 526|Homo sapiens cyclin L1 protein.
Length = 526
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Frame = -2
Query: 608 RSHTDMREHGERTVHEG----RRRRQSSQRTLHPDRRHGHGGP 492
RSHT R + R G R R +S + P R H HG P
Sbjct: 404 RSHTPRRHYNNRRSRSGTYSSRSRSRSRSHSESPRRHHNHGSP 446
>BC007081-1|AAH07081.1| 526|Homo sapiens cyclin L1 protein.
Length = 526
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Frame = -2
Query: 608 RSHTDMREHGERTVHEG----RRRRQSSQRTLHPDRRHGHGGP 492
RSHT R + R G R R +S + P R H HG P
Sbjct: 404 RSHTPRRHYNNRRSRSGTYSSRSRSRSRSHSESPRRHHNHGSP 446
>AY358663-1|AAQ89026.1| 299|Homo sapiens CCNL1 protein.
Length = 299
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Frame = -2
Query: 608 RSHTDMREHGERTVHEG----RRRRQSSQRTLHPDRRHGHGGP 492
RSHT R + R G R R +S + P R H HG P
Sbjct: 177 RSHTPRRHYNNRRSRSGTYSSRSRSRSRSHSESPRRHHNHGSP 219
>AF180920-1|AAD53184.1| 526|Homo sapiens cyclin L ania-6a protein.
Length = 526
Score = 30.7 bits (66), Expect = 4.7
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
Frame = -2
Query: 608 RSHTDMREHGERTVHEG----RRRRQSSQRTLHPDRRHGHGGP 492
RSHT R + R G R R +S + P R H HG P
Sbjct: 404 RSHTPRRHYNNRRSRSGTYSSRSRSRSRSHSESPRRHHNHGSP 446
>U03464-1|AAB52902.1| 1465|Homo sapiens ATP7B protein.
Length = 1465
Score = 30.3 bits (65), Expect = 6.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = -3
Query: 595 ICENMVSGQCMKVGDVVRALNGLSIQIEDTDMEGRLMLADALVYGQAV 452
I E V + ++ GD+VR + G ++ +EG M ++L+ G+A+
Sbjct: 815 IREEQVPMELVQRGDIVRVVPGGKFPVDGKVLEGNTMADESLITGEAM 862
>BC093081-1|AAH93081.1| 938|Homo sapiens DEAD (Asp-Glu-Ala-Asp) box
polypeptide 42 protein.
Length = 938
Score = 30.3 bits (65), Expect = 6.2
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Frame = -2
Query: 602 HTDMREHGERTVH-EGRRRRQSSQRTLHPD-RRHG---HGGPADA-GRRSGVRAGR 453
H+D HG+ H +G R +SS R H D RHG HGG A G G GR
Sbjct: 828 HSDSPRHGDGGRHGDGYRHPESSSR--HTDGHRHGENRHGGSAGRHGENRGANDGR 881
>BC078667-1|AAH78667.1| 919|Homo sapiens DDX42 protein protein.
Length = 919
Score = 30.3 bits (65), Expect = 6.2
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Frame = -2
Query: 602 HTDMREHGERTVH-EGRRRRQSSQRTLHPD-RRHG---HGGPADA-GRRSGVRAGR 453
H+D HG+ H +G R +SS R H D RHG HGG A G G GR
Sbjct: 809 HSDSPRHGDGGRHGDGYRHPESSSR--HTDGHRHGENRHGGSAGRHGENRGANDGR 862
>BC015505-1|AAH15505.1| 819|Homo sapiens DDX42 protein protein.
Length = 819
Score = 30.3 bits (65), Expect = 6.2
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Frame = -2
Query: 602 HTDMREHGERTVH-EGRRRRQSSQRTLHPD-RRHG---HGGPADA-GRRSGVRAGR 453
H+D HG+ H +G R +SS R H D RHG HGG A G G GR
Sbjct: 709 HSDSPRHGDGGRHGDGYRHPESSSR--HTDGHRHGENRHGGSAGRHGENRGANDGR 762
>BC008208-1|AAH08208.1| 208|Homo sapiens DDX42 protein protein.
Length = 208
Score = 30.3 bits (65), Expect = 6.2
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Frame = -2
Query: 602 HTDMREHGERTVH-EGRRRRQSSQRTLHPD-RRHG---HGGPADA-GRRSGVRAGR 453
H+D HG+ H +G R +SS R H D RHG HGG A G G GR
Sbjct: 98 HSDSPRHGDGGRHGDGYRHPESSSR--HTDGHRHGENRHGGSAGRHGENRGANDGR 151
>AB209461-1|BAD92698.1| 662|Homo sapiens ATPase, Cu++ transporting,
beta polypeptide isoform a variant protein.
Length = 662
Score = 30.3 bits (65), Expect = 6.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = -3
Query: 595 ICENMVSGQCMKVGDVVRALNGLSIQIEDTDMEGRLMLADALVYGQAV 452
I E V + ++ GD+VR + G ++ +EG M ++L+ G+A+
Sbjct: 30 IREEQVPMELVQRGDIVRVVPGGKFPVDGKVLEGNTMADESLITGEAM 77
>AB036090-1|BAC66466.1| 938|Homo sapiens RNA helicase-related
protein protein.
Length = 938
Score = 30.3 bits (65), Expect = 6.2
Identities = 23/56 (41%), Positives = 27/56 (48%), Gaps = 6/56 (10%)
Frame = -2
Query: 602 HTDMREHGERTVH-EGRRRRQSSQRTLHPD-RRHG---HGGPADA-GRRSGVRAGR 453
H+D HG+ H +G R +SS R H D RHG HGG A G G GR
Sbjct: 828 HSDSPRHGDGGRHGDGYRHPESSSR--HTDGHRHGENRHGGSAGRHGENRGANDGR 881
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,165,528
Number of Sequences: 237096
Number of extensions: 1312655
Number of successful extensions: 5079
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5075
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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