Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12f11
(763 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical... 33 0.17
Z81568-2|CAB04590.1| 276|Caenorhabditis elegans Hypothetical pr... 33 0.22
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 33 0.29
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 31 0.68
Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical pr... 31 0.89
U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical pr... 31 0.89
AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical ... 31 0.89
Z77660-4|CAB01172.1| 501|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical ... 31 1.2
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 31 1.2
U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical pr... 30 1.6
U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical p... 30 1.6
U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to isle... 30 1.6
AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein... 30 1.6
AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein. 30 1.6
Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical p... 30 2.1
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 29 2.7
AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical ... 29 2.7
Z82280-2|CAB05262.1| 161|Caenorhabditis elegans Hypothetical pr... 29 4.8
Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical p... 29 4.8
Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical p... 29 4.8
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 29 4.8
U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical pr... 29 4.8
AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical ... 29 4.8
AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical ... 29 4.8
Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical pr... 28 6.3
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 28 6.3
EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein. 28 6.3
AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical... 28 6.3
AF022982-5|AAB69936.2| 799|Caenorhabditis elegans Hypothetical ... 28 6.3
Z92809-2|CAB07271.1| 628|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical p... 28 8.3
Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 28 8.3
Z32683-13|CAA83630.1| 386|Caenorhabditis elegans Hypothetical p... 28 8.3
U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocyto... 28 8.3
U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocyto... 28 8.3
AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein. 28 8.3
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 28 8.3
AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical ... 28 8.3
>AF078790-14|AAC26930.1| 335|Caenorhabditis elegans Hypothetical
protein F36H12.3 protein.
Length = 335
Score = 33.5 bits (73), Expect = 0.17
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSK 66
DDKKS+NK +D E+ ++ + K+E+ K + KE KK+ + + K
Sbjct: 151 DDKKSDNKDDKDDEKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEKKEEEKK 202
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/51 (31%), Positives = 26/51 (50%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKS 69
++KK ++K E + KD ++ K ED K + + K+D DD KS
Sbjct: 106 EEKKEDDKKDEKKDE-KKDEKEEDKKSEDKKEDEKEKDDDKKEDKKDDKKS 155
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYK 72
+DKK K E E KD KD K+E + KE +K+ +DD K
Sbjct: 98 EDKKEEKKE-EKKEDDKKDEKKDEKKDEKEEDKKSEDKKEDEKEKDDDKK 146
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/59 (28%), Positives = 32/59 (54%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
+DKKS +K ++ E KD++K K++D K+ + + KK+ D K + +K+
Sbjct: 127 EDKKSEDKKEDEKE---KDDDKKEDKKDDKKSDNKDDKDDEKKEEKKDDKEEKKEEKKE 182
>Z81568-2|CAB04590.1| 276|Caenorhabditis elegans Hypothetical
protein K08E3.2 protein.
Length = 276
Score = 33.1 bits (72), Expect = 0.22
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Frame = -3
Query: 218 DKKSNNKYIEDTERLDKDNNKDTTKEE---DMKTIIRRMLKETKK-DLNDDYKSKAM 60
++K NN+ ++ + +KD KD K+E D K KE KK D DD K+K+M
Sbjct: 112 EEKENNEKKDENKNKNKDERKDEKKDEKKDDEKDERNDEKKEEKKDDQKDDKKAKSM 168
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/58 (27%), Positives = 32/58 (55%)
Frame = -3
Query: 218 DKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
+KK + E+ E+ D++ NK+ + +D K ++ + K + ND+ K + + QKD
Sbjct: 106 EKKKTAEEKENNEKKDENKNKNKDERKDEKKDEKK--DDEKDERNDEKKEEKKDDQKD 161
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = -3
Query: 209 SNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKDLSSIN 30
S + +E E ++K K KEE+ K ++ KE KKD + + K + +K +
Sbjct: 55 SKSLALEKDEDVEKKKEKGEEKEEEEKGEKKKEDKEEKKDDSKEDKKDEDHEKKKTAEEK 114
Query: 29 EN 24
EN
Sbjct: 115 EN 116
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
DDK+ ++ E+ ++ KD K+ EED K ++ K+ D ++D K K +KD
Sbjct: 246 DDKEKDDDDEEEKDKKKKDKKKNDDDEEDKKK-DKKKKKDDDDDEDEDNKKKDKKKKKD 303
Score = 32.3 bits (70), Expect = 0.39
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = -3
Query: 215 KKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
KK K +D E KD K K +D ++ K+ KKD ND+ + + +KD
Sbjct: 147 KKDKKKEEDDEEEEQKDKKKKDEKNDDDDEEDKKKDKKKKKDDNDEEEKEKDKKKKD 203
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/59 (30%), Positives = 31/59 (52%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
DD+ +NK + ++ D +++D KE+D K + K+ D +DD K K +KD
Sbjct: 287 DDEDEDNKKKDKKKKKDDKDDEDEEKEKDKK----KKDKKKDDDDDDDEKEKKDKKKKD 341
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/59 (30%), Positives = 32/59 (54%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
D+K+ +K +D + D+D +KD K++ K + +K+ KK DD K + +KD
Sbjct: 330 DEKEKKDKKKKDDKDDDEDEDKDDKKKK--KDDVDDDMKKDKKKKEDDDKEDEDDKKKD 386
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMN 57
D KK ++K ++ E D K ++DMK ++ + K+D +D K K N
Sbjct: 336 DKKKKDDKDDDEDEDKDDKKKKKDDVDDDMKKDKKKKEDDDKEDEDDKKKDKKKN 390
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = -3
Query: 215 KKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDD 78
KK ++K +D + +KD K K+ D ++ K+ KKD +DD
Sbjct: 243 KKKDDKEKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKKKDDDDD 288
Score = 28.7 bits (61), Expect = 4.8
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -3
Query: 218 DKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDD 78
DKK N+ ED ++ DK KD +ED ++ K+ KKD DD
Sbjct: 264 DKKKNDDDEEDKKK-DKKKKKDDDDDEDEDN--KKKDKKKKKDDKDD 307
Score = 27.9 bits (59), Expect = 8.3
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKD-LNDDYKSKAMNLQKD 45
DD K +D ++ DK + D ++E+ K ++ K+ K D N+D K K +KD
Sbjct: 188 DDNDEEEKE-KDKKKKDKKKDDDDDEDENDKKKDKKKKKDDKDDDENEDDKKKDKKKKKD 246
Score = 27.9 bits (59), Expect = 8.3
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSK 66
DDKK + K +D DK+ + D +E+D K ++ + ++D D K K
Sbjct: 235 DDKKKDKKKKKD----DKEKDDDDEEEKDKKKKDKKKNDDDEEDKKKDKKKK 282
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 31.5 bits (68), Expect = 0.68
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDK-DNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
+ KKS + ++ + + K D+ K K++ K + ++ LKE KK+ KSK +N +K
Sbjct: 89 EKKKSEDDLLDVKKTVSKEDDKKKVDKKDGSKKLSKKKLKEEKKE-----KSKKVNKEKK 143
Query: 44 LS 39
+S
Sbjct: 144 IS 145
>Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical
protein C41G7.6 protein.
Length = 219
Score = 31.1 bits (67), Expect = 0.89
Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 2/64 (3%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLK--ETKKDLNDDYKSKAMNLQK 48
DDKK K E + KD K K+ED K ++ K + KKD + KSK+ +K
Sbjct: 122 DDKKDGKKEDEKKDDEKKDEEKKDDKKEDDKKGDKKDEKKDDEKKDDKKEAKSKSKKSKK 181
Query: 47 DLSS 36
S
Sbjct: 182 SKKS 185
>U88309-2|AAB42334.1| 211|Caenorhabditis elegans Hypothetical
protein T23B3.5 protein.
Length = 211
Score = 31.1 bits (67), Expect = 0.89
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKD-LNDDYKSKAMNLQKD 45
DDKK K D ++ D+ + D K+E+ K + K+ KKD D+ K K+ +K
Sbjct: 104 DDKKDEKK---DEDKKDEKKDADEKKDEEKKDDKKDEKKDEKKDEKKDEKKEKSKKSKKS 160
Query: 44 LSS 36
S
Sbjct: 161 SKS 163
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -3
Query: 218 DKKSNNKYIEDTERLDK--DNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
DKK K E+ + DK D+ KD K+ED K + ++ ++ DD K + + +KD
Sbjct: 85 DKKEEEKKDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKDEKKD 144
>AC024838-6|AAF60823.1| 214|Caenorhabditis elegans Hypothetical
protein Y59E9AL.6 protein.
Length = 214
Score = 31.1 bits (67), Expect = 0.89
Identities = 18/57 (31%), Positives = 30/57 (52%)
Frame = -3
Query: 218 DKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQK 48
D+K ++K +D E+ KD+ K+ K++D K ++ K K N KSK +K
Sbjct: 129 DEKKDDKKEKDEEK--KDDKKEDEKKDDDKKDDKKEAKSKSKKSNKSKKSKKSKREK 183
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/62 (32%), Positives = 30/62 (48%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKDL 42
D+KKS+ K + ++ +KD K K+ED K + KKD + KSK+ K
Sbjct: 121 DEKKSDKKDEKKDDKKEKDEEKKDDKKEDEKK------DDDKKDDKKEAKSKSKKSNKSK 174
Query: 41 SS 36
S
Sbjct: 175 KS 176
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDK-DNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQK 48
D+KK ++K +D ++ DK D KD KE+D + + E K D D K +A + K
Sbjct: 112 DEKKDDDK--KDEKKSDKKDEKKDDKKEKDEEKKDDKKEDEKKDDDKKDDKKEAKSKSK 168
>Z77660-4|CAB01172.1| 501|Caenorhabditis elegans Hypothetical
protein F38H4.4 protein.
Length = 501
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = -3
Query: 224 LDDKKSNNKYIEDTERLDKDNNKDTTKEEDMK 129
LD+K NNK I+D ++ DK K K+++ K
Sbjct: 143 LDEKSDNNKDIKDEKKDDKKEGKKEEKKDEKK 174
>AF067216-1|AAC17524.1| 301|Caenorhabditis elegans Hypothetical
protein C35E7.9 protein.
Length = 301
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = -3
Query: 221 DDKKSNNK-YIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQK 48
DDKK K ++ ++ DK ++K K+E+ K + + K+D DD KS + + +K
Sbjct: 96 DDKKDEKKDEKKEDKKDDKKDDKKEEKKEEKKEDEKEKGDDKKEDEKDDKKSGSKDAEK 154
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
DDKK K ED ++ +K + K K++D K + KE KK +D K K + ++D
Sbjct: 86 DDKKEEAKK-EDDKKDEKKDEKKEDKKDDKKDDKKEEKKEEKK---EDEKEKGDDKKED 140
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = -3
Query: 218 DKKSNNKYIEDTERLDK--DNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
DKK K E+ + DK D+ KD K+ED K + ++ ++ DD K + + +KD
Sbjct: 85 DKKEEEKKDEEKKDGDKKEDDKKDEKKDEDKKDEKKDADEKKDEEKKDDKKDEKKDEKKD 144
Score = 29.9 bits (64), Expect = 2.1
Identities = 18/62 (29%), Positives = 28/62 (45%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKDL 42
DDKK K D ++ D+ + D K+E+ K + K+ KKD + K+ K
Sbjct: 104 DDKKDEKK---DEDKKDEKKDADEKKDEEKKDDKKDEKKDEKKDEKKEKSKKSKKSSKSK 160
Query: 41 SS 36
S
Sbjct: 161 KS 162
>U88172-4|AAB42259.1| 224|Caenorhabditis elegans Hypothetical
protein ZK354.7 protein.
Length = 224
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
++KK + K +D + K+ K+ KEE + +E K++ ND+ K + +KD
Sbjct: 155 EEKKEDKK--DDKKEAKKEEKKEEKKEEKKEEKKEEKKEEKKEEKNDENKEEKKEEKKD 211
>U53154-10|AAC25849.1| 142|Caenorhabditis elegans Hypothetical
protein C33G8.3 protein.
Length = 142
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/58 (27%), Positives = 30/58 (51%)
Frame = -3
Query: 218 DKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
D+ + +D ++ DK NKD+ +EED K ++ K D +++ K N +K+
Sbjct: 87 DEDEEEEEDKDKKKKDKKKNKDSEEEEDKKKDKKK--KNDSSDESEEENKKRKNKRKN 142
>U28971-8|AAD31046.2| 767|Caenorhabditis elegans Related to islet
cell diabetesautoantigen protein 1 protein.
Length = 767
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -3
Query: 191 EDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
ED LD+D N + +EDM II + LKE +D + +A+N Q +
Sbjct: 133 EDPTILDEDVNPENVTDEDMAQIIEQ-LKEPSLPTEEDIE-EALNAQNE 179
>AJ245560-1|CAB52188.1| 767|Caenorhabditis elegans IDA-1 protein
protein.
Length = 767
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -3
Query: 191 EDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
ED LD+D N + +EDM II + LKE +D + +A+N Q +
Sbjct: 133 EDPTILDEDVNPENVTDEDMAQIIEQ-LKEPSLPTEEDIE-EALNAQNE 179
>AF126740-1|AAK14908.1| 767|Caenorhabditis elegans IA2 protein.
Length = 767
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/49 (36%), Positives = 27/49 (55%)
Frame = -3
Query: 191 EDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
ED LD+D N + +EDM II + LKE +D + +A+N Q +
Sbjct: 133 EDPTILDEDVNPENVTDEDMAQIIEQ-LKEPSLPTEEDIE-EALNAQNE 179
>Z35663-11|CAA84732.2| 791|Caenorhabditis elegans Hypothetical
protein T04A8.13 protein.
Length = 791
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
+DKK + K E+ E+ K+ +KD KEE + + E + N++ K + +KD
Sbjct: 94 EDKKEDKKENENDEK--KEKSKDDKKEESKEDKKEKTKTEDNEGKNEEKKKEKKEEKKD 150
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 29.5 bits (63), Expect = 2.7
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDN--NKDTTKEEDMKTIIRRMLKETK 96
DDKKS ++ ++ ++++K N N D K+E+ K +KETK
Sbjct: 601 DDKKSTDEKKKEIKKIEKTNKVNHDEPKKEEKKN--EEQVKETK 642
>AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical
protein F49H12.5 protein.
Length = 257
Score = 29.5 bits (63), Expect = 2.7
Identities = 22/55 (40%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKD---LNDDYKSK 66
D+KK K E E KD K K+ED K + K+ KKD DD KSK
Sbjct: 198 DEKKEEKK--EKKEDKKKDEKKKDKKKEDKKDKKDKKDKKDKKDKKEKKDDKKSK 250
>Z82280-2|CAB05262.1| 161|Caenorhabditis elegans Hypothetical
protein R05A10.2 protein.
Length = 161
Score = 28.7 bits (61), Expect = 4.8
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Frame = -3
Query: 224 LDDKKSNNKYIE-DTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDD------YKSK 66
++ KK++ E D E+ DK N D + ++ + + + ++L+DD + +K
Sbjct: 76 IEVKKADKPAAENDLEKFDKGLNSDKKEYVQKRSHVDSISTNSTENLSDDEMDVMAHLNK 135
Query: 65 AMNLQKDLSSINENVISGD 9
M+ ++D+ NE V+ D
Sbjct: 136 TMDSEEDMQKNNETVLGID 154
>Z70718-11|CAA94680.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Frame = -3
Query: 191 EDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDY----KSKAMNLQKDLSSI 33
++ +++ DNNKD ++++ + R+ KET K ++D+ KSK ++L + + I
Sbjct: 347 KEVRQMNLDNNKDKEVVLEIQSELDRLSKETWKLKDEDFFKEQKSKFIHLAEQIMKI 403
>Z68301-10|CAA92629.1| 590|Caenorhabditis elegans Hypothetical
protein W01B6.9 protein.
Length = 590
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/57 (28%), Positives = 34/57 (59%), Gaps = 4/57 (7%)
Frame = -3
Query: 191 EDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDY----KSKAMNLQKDLSSI 33
++ +++ DNNKD ++++ + R+ KET K ++D+ KSK ++L + + I
Sbjct: 347 KEVRQMNLDNNKDKEVVLEIQSELDRLSKETWKLKDEDFFKEQKSKFIHLAEQIMKI 403
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical
protein T24H7.2 protein.
Length = 925
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/61 (27%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -3
Query: 203 NKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKE--TKKDLNDDYKSKAMNLQKDLSSIN 30
++Y+E+TE D +++ TK ED IR L++ TK D+ + L+ + S+
Sbjct: 708 SQYLEETEFTDYMADEEKTKLEDSVKRIRAWLEDDVTKDTPTKDFTDNLLELKNVVRSVK 767
Query: 29 E 27
+
Sbjct: 768 K 768
>U28735-1|AAG38886.2| 272|Caenorhabditis elegans Hypothetical
protein F48E3.9 protein.
Length = 272
Score = 28.7 bits (61), Expect = 4.8
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Frame = -3
Query: 224 LDDKKSNNKYIEDTERLDKDNNKDTTKEEDMK----TIIRRMLKETKKDLNDDYKSKAMN 57
++DKK +K IE+ L K+N K +TK ++ T +R LKE + + + + KA
Sbjct: 125 INDKKLIDKVIEENSSLIKENAKVSTKLSRLESVDYTYKQRELKEAQNNSDLVLELKAA- 183
Query: 56 LQKDLSS 36
LQ++ SS
Sbjct: 184 LQQEKSS 190
>AL110471-2|CAB63306.1| 479|Caenorhabditis elegans Hypothetical
protein T06D10.2 protein.
Length = 479
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -3
Query: 224 LDDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDD 78
L ++K +K ++ ERLDK +D KEE K + K+ ++ + D
Sbjct: 124 LAEEKRLDKEKKEKERLDKKLEEDKKKEEKRKEAEEKKKKDEEEKMKKD 172
>AC024794-1|AAK68497.1| 994|Caenorhabditis elegans Hypothetical
protein Y48G1BM.5 protein.
Length = 994
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -3
Query: 218 DKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLND-DYKSKAMNLQKDL 42
DK+ + YI+D + KD + + + II M K+ + D D K + Q D
Sbjct: 787 DKQQHMDYIKDLHKWYKDLTQYLVEANSLPDIIEEMFKDVAEKAKDTDLKDYMQDYQADY 846
Query: 41 SSI 33
+ +
Sbjct: 847 TEL 849
>Z81532-6|CAB04326.3| 1128|Caenorhabditis elegans Hypothetical protein
F36F2.3a protein.
Length = 1128
Score = 28.3 bits (60), Expect = 6.3
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = -3
Query: 215 KKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKDLSS 36
+K K+ ED E + +D ++ KE D RR K+ + D DD K + ++D
Sbjct: 864 EKKKGKWNEDEEDIFEDRKEELPKESD-----RRDRKDRRHDDEDDRKER--RHERDSQK 916
Query: 35 INE 27
I+E
Sbjct: 917 IDE 919
>Z47808-7|CAA87771.2| 934|Caenorhabditis elegans Hypothetical
protein D2013.5 protein.
Length = 934
Score = 28.3 bits (60), Expect = 6.3
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = -3
Query: 212 KSNNKYIEDTERLDKDNN--KDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKDLS 39
K+ ++Y + ERL+K+N K D K IR LK K+ L D Y S+ ++L +
Sbjct: 222 KTQSQYQRELERLEKENKVLKQRLLLSDDKAAIR--LKRLKRSLIDMY-SEVLDLLNEYD 278
Query: 38 S 36
S
Sbjct: 279 S 279
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 28.3 bits (60), Expect = 6.3
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKE---EDMKTIIRRMLKETKK-DLNDDYKSKAMNL 54
D+KK K +D + KD K+ KE E+ K + KE KK D +D K K+
Sbjct: 227 DEKKEEKK--DDKKDEKKDEKKEAKKEEKKEEKKEEKKEEKKEEKKDDKKEDDKEKSATK 284
Query: 53 QKDLSS 36
+D S
Sbjct: 285 SEDKKS 290
>EU068466-1|ABU49431.1| 801|Caenorhabditis elegans PRO-3 protein.
Length = 801
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/55 (23%), Positives = 29/55 (52%)
Frame = -3
Query: 212 KSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQK 48
++ N ED++ +D D +T +++ T R + K K++ N + K ++ +K
Sbjct: 262 ENENGDAEDSDEMDSDAEDNTKTLKEVMTSFRNVKKTRKREKNVERAKKMISKKK 316
>AL132948-40|CAD31812.3| 801|Caenorhabditis elegans Hypothetical
protein Y39B6A.14 protein.
Length = 801
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/55 (23%), Positives = 29/55 (52%)
Frame = -3
Query: 212 KSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQK 48
++ N ED++ +D D +T +++ T R + K K++ N + K ++ +K
Sbjct: 262 ENENGDAEDSDEMDSDAEDNTKTLKEVMTSFRNVKKTRKREKNVERAKKMISKKK 316
>AF022982-5|AAB69936.2| 799|Caenorhabditis elegans Hypothetical
protein T23B12.4 protein.
Length = 799
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = -3
Query: 218 DKKSNNKYIEDTERLDKDNNKDTTKEEDMK 129
++KSN++ ++T++ D +N D E+DMK
Sbjct: 279 EQKSNDEATDETDQNDDENVGDDEDEDDMK 308
>Z92809-2|CAB07271.1| 628|Caenorhabditis elegans Hypothetical
protein R17.2 protein.
Length = 628
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/82 (20%), Positives = 36/82 (43%)
Frame = -3
Query: 752 EVLEVMRSEDEDKVDQCLLKKQNQTTALAEKSLHQMVVCGYALIGHDPVQAVRSVISIKN 573
++L ++ + +E K Q L + +++VCG + H+P+ V+
Sbjct: 428 DILGILETSEESKERFSTRPTVLQIVVLKDSRTGKLLVCGNTHLHHNPIDEHVKVLQALT 487
Query: 572 MIRHGIKPIYEHKKEVYSLLKV 507
R + IYE +E+ ++V
Sbjct: 488 CTRK-LLEIYEETRELNKGIEV 508
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 27.9 bits (59), Expect = 8.3
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = -3
Query: 608 VQAVRSVISIKNMIRHGIKPIYEHKKEVYSLLKVCGHDHDTLKKVIKCVISKSPLIKTVM 429
+Q +S+ SI+NM+ PIY HK++ L + +H I ++ L T
Sbjct: 657 LQPGQSLQSIENMLYRA--PIYLHKRQNTDFLLIRSMNHLNQIFKILILVEAHTLQTTTF 714
Query: 428 MGITTKLI---QGVMELTKLMA 372
+ T KLI ++ TK +A
Sbjct: 715 LASTKKLILVEAHTLQTTKFLA 736
>Z81562-9|CAN99693.1| 1376|Caenorhabditis elegans Hypothetical
protein C18D4.2b protein.
Length = 1376
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 179 RLDKDNNKDTTKEEDMKTIIRRM-LKETKKDLNDDYKSKAMNLQKDLSSINEN 24
R + + E +++ I+ ++ +KE+ + DD + +LQKDL S +++
Sbjct: 609 RTPTSRKRSESSESNIENILLKLAMKESLLESKDDSSTNGASLQKDLPSTSDD 661
>Z81562-8|CAN99692.1| 1817|Caenorhabditis elegans Hypothetical
protein C18D4.2a protein.
Length = 1817
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 179 RLDKDNNKDTTKEEDMKTIIRRM-LKETKKDLNDDYKSKAMNLQKDLSSINEN 24
R + + E +++ I+ ++ +KE+ + DD + +LQKDL S +++
Sbjct: 609 RTPTSRKRSESSESNIENILLKLAMKESLLESKDDSSTNGASLQKDLPSTSDD 661
>Z81474-10|CAN99685.1| 1376|Caenorhabditis elegans Hypothetical
protein C18D4.2b protein.
Length = 1376
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 179 RLDKDNNKDTTKEEDMKTIIRRM-LKETKKDLNDDYKSKAMNLQKDLSSINEN 24
R + + E +++ I+ ++ +KE+ + DD + +LQKDL S +++
Sbjct: 609 RTPTSRKRSESSESNIENILLKLAMKESLLESKDDSSTNGASLQKDLPSTSDD 661
>Z81474-9|CAN99684.1| 1817|Caenorhabditis elegans Hypothetical
protein C18D4.2a protein.
Length = 1817
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = -3
Query: 179 RLDKDNNKDTTKEEDMKTIIRRM-LKETKKDLNDDYKSKAMNLQKDLSSINEN 24
R + + E +++ I+ ++ +KE+ + DD + +LQKDL S +++
Sbjct: 609 RTPTSRKRSESSESNIENILLKLAMKESLLESKDDSSTNGASLQKDLPSTSDD 661
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTK-EEDMKTIIRRMLKETKKD 90
++KK + E+ E+ D++ K+ K EE+ K + + +E KKD
Sbjct: 297 EEKKEEVEKKEEDEKKDEEPKKEEEKKEEEQKEEVEKKEEEEKKD 341
>Z32683-13|CAA83630.1| 386|Caenorhabditis elegans Hypothetical
protein R07E5.10a protein.
Length = 386
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
++KK+ + E + +K N D TKE+ + E KD++ D ++ +NLQ D
Sbjct: 244 EEKKARIREFEKFVKENKGKNADMTKED-----LDEATAEQPKDIDFDKFNRLVNLQPD 297
>U29244-9|AAN60507.1| 681|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform b
protein.
Length = 681
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -3
Query: 212 KSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKD---LNDDYKSKAMNLQKDL 42
K+ + EDTE+ + ++D ED K + ++E KK+ L++ +K+ + K+
Sbjct: 499 KAQKETKEDTEKRMQQIDEDAKNAEDCKANDEKEMEELKKEIEMLDNQFKTVRGEIVKET 558
Query: 41 SSINENV 21
S + V
Sbjct: 559 SQREQKV 565
>U29244-8|AAC71084.1| 751|Caenorhabditis elegans Eps15 (endocytosis
protein) homologoussequence protein 1, isoform a
protein.
Length = 751
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -3
Query: 212 KSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKD---LNDDYKSKAMNLQKDL 42
K+ + EDTE+ + ++D ED K + ++E KK+ L++ +K+ + K+
Sbjct: 499 KAQKETKEDTEKRMQQIDEDAKNAEDCKANDEKEMEELKKEIEMLDNQFKTVRGEIVKET 558
Query: 41 SSINENV 21
S + V
Sbjct: 559 SQREQKV 565
>AY027560-1|AAK13051.1| 796|Caenorhabditis elegans EHS-1 protein.
Length = 796
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = -3
Query: 212 KSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKD---LNDDYKSKAMNLQKDL 42
K+ + EDTE+ + ++D ED K + ++E KK+ L++ +K+ + K+
Sbjct: 544 KAQKETKEDTEKRMQQIDEDAKNAEDCKANDEKEMEELKKEIEMLDNQFKTVRGEIVKET 603
Query: 41 SSINENV 21
S + V
Sbjct: 604 SQREQKV 610
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 27.9 bits (59), Expect = 8.3
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Frame = -3
Query: 608 VQAVRSVISIKNMIRHGIKPIYEHKKEVYSLLKVCGHDHDTLKKVIKCVISKSPLIKTVM 429
+Q +S+ SI+NM+ PIY HK++ L + +H I ++ L T
Sbjct: 657 LQPGQSLQSIENMLYRA--PIYLHKRQNTDFLLIRSMNHLNQIFKILILVEAHTLQTTTF 714
Query: 428 MGITTKLI---QGVMELTKLMA 372
+ T KLI ++ TK +A
Sbjct: 715 LASTKKLILVEAHTLQTTKFLA 736
>AF043692-2|AAB97531.1| 253|Caenorhabditis elegans Hypothetical
protein C17F3.3 protein.
Length = 253
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/59 (25%), Positives = 29/59 (49%)
Frame = -3
Query: 221 DDKKSNNKYIEDTERLDKDNNKDTTKEEDMKTIIRRMLKETKKDLNDDYKSKAMNLQKD 45
D++K ++ + E KD+ K KEE + + + KE KK+ + K+ +K+
Sbjct: 138 DEEKKKDEVKDKKEDEKKDDKKPGEKEEKKEEVKKETKKEEKKEEKKEEPKKSEAPKKE 196
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,776,268
Number of Sequences: 27780
Number of extensions: 236199
Number of successful extensions: 1011
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1819579054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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