Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12f03
(823 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX537964-1|CAD97928.1| 898|Homo sapiens hypothetical protein pr... 38 0.058
BC105632-1|AAI05633.1| 898|Homo sapiens chromosome 10 open read... 38 0.058
BC103499-1|AAI03500.1| 898|Homo sapiens chromosome 10 open read... 38 0.058
BC100670-1|AAI00671.1| 1004|Homo sapiens C10orf118 protein protein. 38 0.058
AF273054-1|AAM44457.1| 613|Homo sapiens CTCL tumor antigen HD-C... 38 0.058
L11667-1|AAA35731.1| 370|Homo sapiens cyclophilin-40 protein. 37 0.077
D63861-1|BAA09923.1| 370|Homo sapiens cyclophilin 40 protein. 37 0.077
CR542081-1|CAG46878.1| 370|Homo sapiens PPID protein. 37 0.077
BC030707-1|AAH30707.1| 370|Homo sapiens peptidylprolyl isomeras... 37 0.077
AY714221-1|AAT97986.1| 370|Homo sapiens peptidylprolyl isomeras... 37 0.077
U43195-1|AAB02814.1| 1354|Homo sapiens Rho-associated, coiled-co... 36 0.18
BC113114-1|AAI13115.1| 1354|Homo sapiens Rho-associated, coiled-... 36 0.18
AB208965-1|BAD92202.1| 705|Homo sapiens Rho-associated, coiled-... 36 0.18
M88279-1|AAA36111.1| 459|Homo sapiens immunophilin protein. 33 0.94
BC007924-1|AAH07924.1| 459|Homo sapiens FK506 binding protein 4... 33 0.94
BC001786-1|AAH01786.1| 459|Homo sapiens FK506 binding protein 4... 33 0.94
Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein. 33 1.6
U63610-1|AAB05428.1| 4574|Homo sapiens plectin protein. 33 1.6
U53204-1|AAB05427.1| 4574|Homo sapiens plectin protein. 33 1.6
AY480051-1|AAR95684.1| 4547|Homo sapiens plectin 11 protein. 33 1.6
AY480050-1|AAR95683.1| 4551|Homo sapiens plectin 10 protein. 33 1.6
AY480049-1|AAR95682.1| 4547|Homo sapiens plectin 8 protein. 33 1.6
AY480048-1|AAR95681.1| 4515|Homo sapiens plectin 7 protein. 33 1.6
AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein. 33 1.6
AY480046-1|AAR95679.1| 4525|Homo sapiens plectin 3 protein. 33 1.6
AY480045-1|AAR95678.1| 4533|Homo sapiens plectin 2 protein. 33 1.6
AY480044-1|AAR95677.1| 4574|Homo sapiens plectin 1 protein. 33 1.6
X53051-1|CAA37218.1| 739|Homo sapiens precursor peptide protein. 32 2.2
M73255-1|AAA61270.1| 739|Homo sapiens vascular cell adhesion mo... 32 2.2
M60335-1|AAA61269.1| 739|Homo sapiens vascular cell adhesion mo... 32 2.2
BC085003-1|AAH85003.1| 739|Homo sapiens vascular cell adhesion ... 32 2.2
BC068490-1|AAH68490.2| 739|Homo sapiens vascular cell adhesion ... 32 2.2
BC017276-1|AAH17276.3| 739|Homo sapiens vascular cell adhesion ... 32 2.2
AK223266-1|BAD96986.1| 739|Homo sapiens vascular cell adhesion ... 32 2.2
AF536818-1|AAM96190.1| 739|Homo sapiens vascular cell adhesion ... 32 2.2
BC104956-1|AAI04957.1| 1700|Homo sapiens SKIP protein protein. 31 3.8
BC104954-1|AAI04955.1| 1700|Homo sapiens SKIP protein protein. 31 3.8
BC101063-1|AAI01064.1| 929|Homo sapiens unc-45 homolog B (C. el... 31 3.8
BC101062-1|AAI01063.1| 850|Homo sapiens UNC45B protein protein. 31 3.8
AF539794-1|AAO13384.1| 931|Homo sapiens striated muscle UNC45 p... 31 3.8
X57500-1|CAA40736.1| 628|Homo sapiens nuclear factor IV protein. 31 5.0
U89293-1|AAB72039.1| 936|Homo sapiens MSH4 protein. 31 5.0
M30938-1|AAA36154.1| 732|Homo sapiens protein ( Human Ku (p70/p... 31 5.0
J04977-1|AAA59475.1| 732|Homo sapiens G22P1 protein. 31 5.0
DQ787434-1|ABG46942.1| 732|Homo sapiens X-ray repair complement... 31 5.0
BC095442-1|AAH95442.1| 732|Homo sapiens X-ray repair complement... 31 5.0
BC033030-1|AAH33030.1| 936|Homo sapiens mutS homolog 4 (E. coli... 31 5.0
BC019027-1|AAH19027.1| 732|Homo sapiens X-ray repair complement... 31 5.0
AY268350-1|AAP03427.1| 936|Homo sapiens mutS homolog 4 (E. coli... 31 5.0
AL445464-2|CAH71812.1| 936|Homo sapiens mutS homolog 4 (E. coli... 31 5.0
AL357314-6|CAI22394.1| 936|Homo sapiens mutS homolog 4 (E. coli... 31 5.0
AK222603-1|BAD96323.1| 732|Homo sapiens ATP-dependent DNA helic... 31 5.0
AF104243-1|AAD17920.1| 936|Homo sapiens meiosis-specific MutS h... 31 5.0
AC012513-1|AAY24231.1| 568|Homo sapiens unknown protein. 31 5.0
BC022363-1|AAH22363.1| 174|Homo sapiens VPS37A protein protein. 31 6.7
AY033079-1|AAK54349.1| 397|Homo sapiens hepatocellular carcinom... 31 6.7
AK057204-1|BAB71381.1| 397|Homo sapiens protein ( Homo sapiens ... 31 6.7
AF547097-1|AAQ12067.1| 372|Homo sapiens hcrp1 beta protein. 31 6.7
>BX537964-1|CAD97928.1| 898|Homo sapiens hypothetical protein
protein.
Length = 898
Score = 37.5 bits (83), Expect = 0.058
Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Frame = -3
Query: 695 QFDEAEKKLRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFK 516
Q + K+++ E L +E E + L + KV C + + L + L+++ + + K
Sbjct: 473 QLEMHHAKIKELEDLKRTFKEGMDELRTL-RTKVKCLEDERLRTED-ELSKYKEIINRQK 530
Query: 515 VEVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIEKDFVSSKQEE-- 342
E++NL+ K +L E+E +K N N ++KD S++ E
Sbjct: 531 AEIQNLLDKVK---TADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESE 587
Query: 341 -LSTCEKNTDNKHYLLGKENDMETEID 264
L E+ T L + N ++++ D
Sbjct: 588 LLLFTERLTSKNAQLQSESNSLQSQFD 614
>BC105632-1|AAI05633.1| 898|Homo sapiens chromosome 10 open reading
frame 118 protein.
Length = 898
Score = 37.5 bits (83), Expect = 0.058
Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Frame = -3
Query: 695 QFDEAEKKLRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFK 516
Q + K+++ E L +E E + L + KV C + + L + L+++ + + K
Sbjct: 473 QLEMHHAKIKELEDLKRTFKEGMDELRTL-RTKVKCLEDERLRTED-ELSKYKEIINRQK 530
Query: 515 VEVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIEKDFVSSKQEE-- 342
E++NL+ K +L E+E +K N N ++KD S++ E
Sbjct: 531 AEIQNLLDKVK---TADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESE 587
Query: 341 -LSTCEKNTDNKHYLLGKENDMETEID 264
L E+ T L + N ++++ D
Sbjct: 588 LLLFTERLTSKNAQLQSESNSLQSQFD 614
>BC103499-1|AAI03500.1| 898|Homo sapiens chromosome 10 open reading
frame 118 protein.
Length = 898
Score = 37.5 bits (83), Expect = 0.058
Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Frame = -3
Query: 695 QFDEAEKKLRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFK 516
Q + K+++ E L +E E + L + KV C + + L + L+++ + + K
Sbjct: 473 QLEMHHAKIKELEDLKRTFKEGMDELRTL-RTKVKCLEDERLRTED-ELSKYKEIINRQK 530
Query: 515 VEVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIEKDFVSSKQEE-- 342
E++NL+ K +L E+E +K N N ++KD S++ E
Sbjct: 531 AEIQNLLDKVK---TADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESE 587
Query: 341 -LSTCEKNTDNKHYLLGKENDMETEID 264
L E+ T L + N ++++ D
Sbjct: 588 LLLFTERLTSKNAQLQSESNSLQSQFD 614
>BC100670-1|AAI00671.1| 1004|Homo sapiens C10orf118 protein protein.
Length = 1004
Score = 37.5 bits (83), Expect = 0.058
Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Frame = -3
Query: 695 QFDEAEKKLRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFK 516
Q + K+++ E L +E E + L + KV C + + L + L+++ + + K
Sbjct: 579 QLEMHHAKIKELEDLKRTFKEGMDELRTL-RTKVKCLEDERLRTED-ELSKYKEIINRQK 636
Query: 515 VEVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIEKDFVSSKQEE-- 342
E++NL+ K +L E+E +K N N ++KD S++ E
Sbjct: 637 AEIQNLLDKVK---TADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESE 693
Query: 341 -LSTCEKNTDNKHYLLGKENDMETEID 264
L E+ T L + N ++++ D
Sbjct: 694 LLLFTERLTSKNAQLQSESNSLQSQFD 720
>AF273054-1|AAM44457.1| 613|Homo sapiens CTCL tumor antigen
HD-CL-01 protein.
Length = 613
Score = 37.5 bits (83), Expect = 0.058
Identities = 33/147 (22%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Frame = -3
Query: 695 QFDEAEKKLRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFK 516
Q + K+++ E L +E E + L + KV C + + L + L+++ + + K
Sbjct: 290 QLEMHHAKIKELEDLKRTFKEGMDELRTL-RTKVKCLEDERLRTED-ELSKYKEIINRQK 347
Query: 515 VEVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIEKDFVSSKQEE-- 342
E++NL+ K +L E+E +K N N ++KD S++ E
Sbjct: 348 AEIQNLLDKVK---TADQLQEQLQRGKQEIENLKEEVESLNSLINDLQKDIEGSRKRESE 404
Query: 341 -LSTCEKNTDNKHYLLGKENDMETEID 264
L E+ T L + N ++++ D
Sbjct: 405 LLLFTERLTSKNAQLQSESNSLQSQFD 431
>L11667-1|AAA35731.1| 370|Homo sapiens cyclophilin-40 protein.
Length = 370
Score = 37.1 bits (82), Expect = 0.077
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = -3
Query: 746 NNAKALLQNARALRMIGQFDEAEKKLRKAEILSPNSEEMKTE-AKLLQKLKVSCNKSKLL 570
+N KAL + A+ + + ++D+A L+KA+ ++P + ++ E K+ QK+K +K K +
Sbjct: 305 SNTKALYRRAQGWQGLKEYDQALADLKKAQGIAPEDKAIQAELLKVKQKIKAQKDKEKAV 364
Query: 569 AEK 561
K
Sbjct: 365 YAK 367
>D63861-1|BAA09923.1| 370|Homo sapiens cyclophilin 40 protein.
Length = 370
Score = 37.1 bits (82), Expect = 0.077
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = -3
Query: 746 NNAKALLQNARALRMIGQFDEAEKKLRKAEILSPNSEEMKTE-AKLLQKLKVSCNKSKLL 570
+N KAL + A+ + + ++D+A L+KA+ ++P + ++ E K+ QK+K +K K +
Sbjct: 305 SNTKALYRRAQGWQGLKEYDQALADLKKAQGIAPEDKAIQAELLKVKQKIKAQKDKEKAV 364
Query: 569 AEK 561
K
Sbjct: 365 YAK 367
>CR542081-1|CAG46878.1| 370|Homo sapiens PPID protein.
Length = 370
Score = 37.1 bits (82), Expect = 0.077
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = -3
Query: 746 NNAKALLQNARALRMIGQFDEAEKKLRKAEILSPNSEEMKTE-AKLLQKLKVSCNKSKLL 570
+N KAL + A+ + + ++D+A L+KA+ ++P + ++ E K+ QK+K +K K +
Sbjct: 305 SNTKALYRRAQGWQGLKEYDQALADLKKAQGIAPEDKAIQAELLKVKQKIKAQKDKEKAV 364
Query: 569 AEK 561
K
Sbjct: 365 YAK 367
>BC030707-1|AAH30707.1| 370|Homo sapiens peptidylprolyl isomerase D
(cyclophilin D) protein.
Length = 370
Score = 37.1 bits (82), Expect = 0.077
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = -3
Query: 746 NNAKALLQNARALRMIGQFDEAEKKLRKAEILSPNSEEMKTE-AKLLQKLKVSCNKSKLL 570
+N KAL + A+ + + ++D+A L+KA+ ++P + ++ E K+ QK+K +K K +
Sbjct: 305 SNTKALYRRAQGWQGLKEYDQALADLKKAQGIAPEDKAIQAELLKVKQKIKAQKDKEKAV 364
Query: 569 AEK 561
K
Sbjct: 365 YAK 367
>AY714221-1|AAT97986.1| 370|Homo sapiens peptidylprolyl isomerase D
(cyclophilin D) protein.
Length = 370
Score = 37.1 bits (82), Expect = 0.077
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = -3
Query: 746 NNAKALLQNARALRMIGQFDEAEKKLRKAEILSPNSEEMKTE-AKLLQKLKVSCNKSKLL 570
+N KAL + A+ + + ++D+A L+KA+ ++P + ++ E K+ QK+K +K K +
Sbjct: 305 SNTKALYRRAQGWQGLKEYDQALADLKKAQGIAPEDKAIQAELLKVKQKIKAQKDKEKAV 364
Query: 569 AEK 561
K
Sbjct: 365 YAK 367
>U43195-1|AAB02814.1| 1354|Homo sapiens Rho-associated, coiled-coil
containing protein kinase p160ROCK protein.
Length = 1354
Score = 35.9 bits (79), Expect = 0.18
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Frame = -3
Query: 686 EAEKKLRKAEILSPNSEEMKTEAK-LLQKLKVSCNKSKLLAE--KTIGLAQHS--AVSDN 522
+ ++ +K E L+ N E M+ E K L +L+ NK LL KT + +
Sbjct: 747 DLKQSQQKLEHLTGNKERMEDEVKNLTLQLEQESNKRLLLQNELKTQAFEADNLKGLEKQ 806
Query: 521 FKVEVENLISNFKE-NINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIEKDFVSSKQE 345
K E+ L+ + L +LT Y + ++ ++ E +F+ + K V +E
Sbjct: 807 MKQEINTLLEAKRLLEFELAQLTKQYRGNEGQMRELQDQLEAEQ-YFSTLYKTQVKELKE 865
Query: 344 ELSTCEKNTDNKHYLLGKENDMET---EIDIANSNDE 243
E+ EKN +N + +N+ ET ++D+A + E
Sbjct: 866 EIE--EKNRENLKKIQELQNEKETLATQLDLAETKAE 900
>BC113114-1|AAI13115.1| 1354|Homo sapiens Rho-associated, coiled-coil
containing protein kinase 1 protein.
Length = 1354
Score = 35.9 bits (79), Expect = 0.18
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Frame = -3
Query: 686 EAEKKLRKAEILSPNSEEMKTEAK-LLQKLKVSCNKSKLLAE--KTIGLAQHS--AVSDN 522
+ ++ +K E L+ N E M+ E K L +L+ NK LL KT + +
Sbjct: 747 DLKQSQQKLEHLTGNKERMEDEVKNLTLQLEQESNKRLLLQNELKTQAFEADNLKGLEKQ 806
Query: 521 FKVEVENLISNFKE-NINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIEKDFVSSKQE 345
K E+ L+ + L +LT Y + ++ ++ E +F+ + K V +E
Sbjct: 807 MKQEINTLLEAKRLLEFELAQLTKQYRGNEGQMRELQDQLEAEQ-YFSTLYKTQVKELKE 865
Query: 344 ELSTCEKNTDNKHYLLGKENDMET---EIDIANSNDE 243
E+ EKN +N + +N+ ET ++D+A + E
Sbjct: 866 EIE--EKNRENLKKIQELQNEKETLATQLDLAETKAE 900
>AB208965-1|BAD92202.1| 705|Homo sapiens Rho-associated,
coiled-coil containing protein kinase 1 variant protein.
Length = 705
Score = 35.9 bits (79), Expect = 0.18
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 9/157 (5%)
Frame = -3
Query: 686 EAEKKLRKAEILSPNSEEMKTEAK-LLQKLKVSCNKSKLLAE--KTIGLAQHS--AVSDN 522
+ ++ +K E L+ N E M+ E K L +L+ NK LL KT + +
Sbjct: 425 DLKQSQQKLEHLTGNKERMEDEVKNLTLQLEQESNKRLLLQNELKTQAFEADNLKGLEKQ 484
Query: 521 FKVEVENLISNFKE-NINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIEKDFVSSKQE 345
K E+ L+ + L +LT Y + ++ ++ E +F+ + K V +E
Sbjct: 485 MKQEINTLLEAKRLLEFELAQLTKQYRGNEGQMRELQDQLEAEQ-YFSTLYKTQVKELKE 543
Query: 344 ELSTCEKNTDNKHYLLGKENDMET---EIDIANSNDE 243
E+ EKN +N + +N+ ET ++D+A + E
Sbjct: 544 EIE--EKNRENLKKIQELQNEKETLATQLDLAETKAE 578
>M88279-1|AAA36111.1| 459|Homo sapiens immunophilin protein.
Length = 459
Score = 33.5 bits (73), Expect = 0.94
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -3
Query: 821 CYNKINXPXKTCIACNELNRLNSLWNNAKALLQNARALRMIGQFDEAEKKLRKAEILSPN 642
C+ K+ +CN+ L+S NN K L + A + F+ A +K L PN
Sbjct: 328 CHLKLQAFSAAIESCNKALELDS--NNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPN 385
Query: 641 SEEMKTEAKLLQK 603
++ KT+ + Q+
Sbjct: 386 NKAAKTQLAVCQQ 398
>BC007924-1|AAH07924.1| 459|Homo sapiens FK506 binding protein 4,
59kDa protein.
Length = 459
Score = 33.5 bits (73), Expect = 0.94
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -3
Query: 821 CYNKINXPXKTCIACNELNRLNSLWNNAKALLQNARALRMIGQFDEAEKKLRKAEILSPN 642
C+ K+ +CN+ L+S NN K L + A + F+ A +K L PN
Sbjct: 328 CHLKLQAFSAAIESCNKALELDS--NNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPN 385
Query: 641 SEEMKTEAKLLQK 603
++ KT+ + Q+
Sbjct: 386 NKAAKTQLAVCQQ 398
>BC001786-1|AAH01786.1| 459|Homo sapiens FK506 binding protein 4,
59kDa protein.
Length = 459
Score = 33.5 bits (73), Expect = 0.94
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = -3
Query: 821 CYNKINXPXKTCIACNELNRLNSLWNNAKALLQNARALRMIGQFDEAEKKLRKAEILSPN 642
C+ K+ +CN+ L+S NN K L + A + F+ A +K L PN
Sbjct: 328 CHLKLQAFSAAIESCNKALELDS--NNEKGLFRRGEAHLAVNDFELARADFQKVLQLYPN 385
Query: 641 SEEMKTEAKLLQK 603
++ KT+ + Q+
Sbjct: 386 NKAAKTQLAVCQQ 398
>Z54367-1|CAA91196.1| 4684|Homo sapiens plectin protein.
Length = 4684
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Frame = -3
Query: 686 EAEKKLRKAEILSPNSEEMKT--EAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
E EK ++A++L SEEM+T + +LLQ+ + + L+EK L Q + K
Sbjct: 2595 EKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQAL--QQSFLSEKD-SLLQRERFIEQEKA 2651
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIE-KDFVSSKQEELS 336
++E L + + E E + E + E ++ V KQEEL
Sbjct: 2652 KLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRRKQEELQ 2711
Query: 335 TCEKNTDNKHYLLGKEN 285
E+ + LL +EN
Sbjct: 2712 QLEQQRRQQEELLAEEN 2728
>U63610-1|AAB05428.1| 4574|Homo sapiens plectin protein.
Length = 4574
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Frame = -3
Query: 686 EAEKKLRKAEILSPNSEEMKT--EAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
E EK ++A++L SEEM+T + +LLQ+ + + L+EK L Q + K
Sbjct: 2485 EKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQAL--QQSFLSEKD-SLLQRERFIEQEKA 2541
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIE-KDFVSSKQEELS 336
++E L + + E E + E + E ++ V KQEEL
Sbjct: 2542 KLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRRKQEELQ 2601
Query: 335 TCEKNTDNKHYLLGKEN 285
E+ + LL +EN
Sbjct: 2602 QLEQQRRQQEELLAEEN 2618
>U53204-1|AAB05427.1| 4574|Homo sapiens plectin protein.
Length = 4574
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Frame = -3
Query: 686 EAEKKLRKAEILSPNSEEMKT--EAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
E EK ++A++L SEEM+T + +LLQ+ + + L+EK L Q + K
Sbjct: 2485 EKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQAL--QQSFLSEKD-SLLQRERFIEQEKA 2541
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIE-KDFVSSKQEELS 336
++E L + + E E + E + E ++ V KQEEL
Sbjct: 2542 KLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRRKQEELQ 2601
Query: 335 TCEKNTDNKHYLLGKEN 285
E+ + LL +EN
Sbjct: 2602 QLEQQRRQQEELLAEEN 2618
>AY480051-1|AAR95684.1| 4547|Homo sapiens plectin 11 protein.
Length = 4547
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Frame = -3
Query: 686 EAEKKLRKAEILSPNSEEMKT--EAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
E EK ++A++L SEEM+T + +LLQ+ + + L+EK L Q + K
Sbjct: 2458 EKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQAL--QQSFLSEKD-SLLQRERFIEQEKA 2514
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIE-KDFVSSKQEELS 336
++E L + + E E + E + E ++ V KQEEL
Sbjct: 2515 KLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRRKQEELQ 2574
Query: 335 TCEKNTDNKHYLLGKEN 285
E+ + LL +EN
Sbjct: 2575 QLEQQRRQQEELLAEEN 2591
>AY480050-1|AAR95683.1| 4551|Homo sapiens plectin 10 protein.
Length = 4551
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Frame = -3
Query: 686 EAEKKLRKAEILSPNSEEMKT--EAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
E EK ++A++L SEEM+T + +LLQ+ + + L+EK L Q + K
Sbjct: 2462 EKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQAL--QQSFLSEKD-SLLQRERFIEQEKA 2518
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIE-KDFVSSKQEELS 336
++E L + + E E + E + E ++ V KQEEL
Sbjct: 2519 KLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRRKQEELQ 2578
Query: 335 TCEKNTDNKHYLLGKEN 285
E+ + LL +EN
Sbjct: 2579 QLEQQRRQQEELLAEEN 2595
>AY480049-1|AAR95682.1| 4547|Homo sapiens plectin 8 protein.
Length = 4547
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Frame = -3
Query: 686 EAEKKLRKAEILSPNSEEMKT--EAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
E EK ++A++L SEEM+T + +LLQ+ + + L+EK L Q + K
Sbjct: 2458 EKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQAL--QQSFLSEKD-SLLQRERFIEQEKA 2514
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIE-KDFVSSKQEELS 336
++E L + + E E + E + E ++ V KQEEL
Sbjct: 2515 KLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRRKQEELQ 2574
Query: 335 TCEKNTDNKHYLLGKEN 285
E+ + LL +EN
Sbjct: 2575 QLEQQRRQQEELLAEEN 2591
>AY480048-1|AAR95681.1| 4515|Homo sapiens plectin 7 protein.
Length = 4515
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Frame = -3
Query: 686 EAEKKLRKAEILSPNSEEMKT--EAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
E EK ++A++L SEEM+T + +LLQ+ + + L+EK L Q + K
Sbjct: 2426 EKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQAL--QQSFLSEKD-SLLQRERFIEQEKA 2482
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIE-KDFVSSKQEELS 336
++E L + + E E + E + E ++ V KQEEL
Sbjct: 2483 KLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRRKQEELQ 2542
Query: 335 TCEKNTDNKHYLLGKEN 285
E+ + LL +EN
Sbjct: 2543 QLEQQRRQQEELLAEEN 2559
>AY480047-1|AAR95680.1| 4684|Homo sapiens plectin 6 protein.
Length = 4684
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Frame = -3
Query: 686 EAEKKLRKAEILSPNSEEMKT--EAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
E EK ++A++L SEEM+T + +LLQ+ + + L+EK L Q + K
Sbjct: 2595 EKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQAL--QQSFLSEKD-SLLQRERFIEQEKA 2651
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIE-KDFVSSKQEELS 336
++E L + + E E + E + E ++ V KQEEL
Sbjct: 2652 KLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRRKQEELQ 2711
Query: 335 TCEKNTDNKHYLLGKEN 285
E+ + LL +EN
Sbjct: 2712 QLEQQRRQQEELLAEEN 2728
>AY480046-1|AAR95679.1| 4525|Homo sapiens plectin 3 protein.
Length = 4525
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Frame = -3
Query: 686 EAEKKLRKAEILSPNSEEMKT--EAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
E EK ++A++L SEEM+T + +LLQ+ + + L+EK L Q + K
Sbjct: 2436 EKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQAL--QQSFLSEKD-SLLQRERFIEQEKA 2492
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIE-KDFVSSKQEELS 336
++E L + + E E + E + E ++ V KQEEL
Sbjct: 2493 KLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRRKQEELQ 2552
Query: 335 TCEKNTDNKHYLLGKEN 285
E+ + LL +EN
Sbjct: 2553 QLEQQRRQQEELLAEEN 2569
>AY480045-1|AAR95678.1| 4533|Homo sapiens plectin 2 protein.
Length = 4533
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Frame = -3
Query: 686 EAEKKLRKAEILSPNSEEMKT--EAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
E EK ++A++L SEEM+T + +LLQ+ + + L+EK L Q + K
Sbjct: 2444 EKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQAL--QQSFLSEKD-SLLQRERFIEQEKA 2500
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIE-KDFVSSKQEELS 336
++E L + + E E + E + E ++ V KQEEL
Sbjct: 2501 KLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRRKQEELQ 2560
Query: 335 TCEKNTDNKHYLLGKEN 285
E+ + LL +EN
Sbjct: 2561 QLEQQRRQQEELLAEEN 2577
>AY480044-1|AAR95677.1| 4574|Homo sapiens plectin 1 protein.
Length = 4574
Score = 32.7 bits (71), Expect = 1.6
Identities = 36/137 (26%), Positives = 59/137 (43%), Gaps = 3/137 (2%)
Frame = -3
Query: 686 EAEKKLRKAEILSPNSEEMKT--EAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
E EK ++A++L SEEM+T + +LLQ+ + + L+EK L Q + K
Sbjct: 2485 EKEKLQQEAKLLQLKSEEMQTVQQEQLLQETQAL--QQSFLSEKD-SLLQRERFIEQEKA 2541
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRENLFFNKIE-KDFVSSKQEELS 336
++E L + + E E + E + E ++ V KQEEL
Sbjct: 2542 KLEQLFQDEVAKAQQLREEQQRQQQQMEQERQRLVASMEEARRRQHEAEEGVRRKQEELQ 2601
Query: 335 TCEKNTDNKHYLLGKEN 285
E+ + LL +EN
Sbjct: 2602 QLEQQRRQQEELLAEEN 2618
>X53051-1|CAA37218.1| 739|Homo sapiens precursor peptide protein.
Length = 739
Score = 32.3 bits (70), Expect = 2.2
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = -3
Query: 596 VSCNKSKLLAEKTIGLAQHSAVSDNFKVEVENLISNFKENINLCKLTLPYNLDTAEVEFI 417
V+C KL EK I + +S D ++E+ + N CK+ Y LD E+E +
Sbjct: 385 VTCGHKKL--EKGIQVELYSFPRDP-EIEMSGGLVNGSSVTVSCKVPSVYPLDRLEIELL 441
Query: 416 KSTCIRENLFF 384
K I EN+ F
Sbjct: 442 KGETILENIEF 452
>M73255-1|AAA61270.1| 739|Homo sapiens vascular cell adhesion
molecule-1 protein.
Length = 739
Score = 32.3 bits (70), Expect = 2.2
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = -3
Query: 596 VSCNKSKLLAEKTIGLAQHSAVSDNFKVEVENLISNFKENINLCKLTLPYNLDTAEVEFI 417
V+C KL EK I + +S D ++E+ + N CK+ Y LD E+E +
Sbjct: 385 VTCGHKKL--EKGIQVELYSFPRDP-EIEMSGGLVNGSSVTVSCKVPSVYPLDRLEIELL 441
Query: 416 KSTCIRENLFF 384
K I EN+ F
Sbjct: 442 KGETILENIEF 452
>M60335-1|AAA61269.1| 739|Homo sapiens vascular cell adhesion
molecule-1 protein.
Length = 739
Score = 32.3 bits (70), Expect = 2.2
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = -3
Query: 596 VSCNKSKLLAEKTIGLAQHSAVSDNFKVEVENLISNFKENINLCKLTLPYNLDTAEVEFI 417
V+C KL EK I + +S D ++E+ + N CK+ Y LD E+E +
Sbjct: 385 VTCGHKKL--EKGIQVELYSFPRDP-EIEMSGGLVNGSSVTVSCKVPSVYPLDRLEIELL 441
Query: 416 KSTCIRENLFF 384
K I EN+ F
Sbjct: 442 KGETILENIEF 452
>BC085003-1|AAH85003.1| 739|Homo sapiens vascular cell adhesion
molecule 1 protein.
Length = 739
Score = 32.3 bits (70), Expect = 2.2
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = -3
Query: 596 VSCNKSKLLAEKTIGLAQHSAVSDNFKVEVENLISNFKENINLCKLTLPYNLDTAEVEFI 417
V+C KL EK I + +S D ++E+ + N CK+ Y LD E+E +
Sbjct: 385 VTCGHKKL--EKGIQVELYSFPRDP-EIEMSGGLVNGSSVTVSCKVPSVYPLDRLEIELL 441
Query: 416 KSTCIRENLFF 384
K I EN+ F
Sbjct: 442 KGETILENIEF 452
>BC068490-1|AAH68490.2| 739|Homo sapiens vascular cell adhesion
molecule 1 protein.
Length = 739
Score = 32.3 bits (70), Expect = 2.2
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = -3
Query: 596 VSCNKSKLLAEKTIGLAQHSAVSDNFKVEVENLISNFKENINLCKLTLPYNLDTAEVEFI 417
V+C KL EK I + +S D ++E+ + N CK+ Y LD E+E +
Sbjct: 385 VTCGHKKL--EKGIQVELYSFPRDP-EIEMSGGLVNGSSVTVSCKVPSVYPLDRLEIELL 441
Query: 416 KSTCIRENLFF 384
K I EN+ F
Sbjct: 442 KGETILENIEF 452
>BC017276-1|AAH17276.3| 739|Homo sapiens vascular cell adhesion
molecule 1 protein.
Length = 739
Score = 32.3 bits (70), Expect = 2.2
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = -3
Query: 596 VSCNKSKLLAEKTIGLAQHSAVSDNFKVEVENLISNFKENINLCKLTLPYNLDTAEVEFI 417
V+C KL EK I + +S D ++E+ + N CK+ Y LD E+E +
Sbjct: 385 VTCGHKKL--EKGIQVELYSFPRDP-EIEMSGGLVNGSSVTVSCKVPSVYPLDRLEIELL 441
Query: 416 KSTCIRENLFF 384
K I EN+ F
Sbjct: 442 KGETILENIEF 452
>AK223266-1|BAD96986.1| 739|Homo sapiens vascular cell adhesion
molecule 1 isoform a precursor variant protein.
Length = 739
Score = 32.3 bits (70), Expect = 2.2
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = -3
Query: 596 VSCNKSKLLAEKTIGLAQHSAVSDNFKVEVENLISNFKENINLCKLTLPYNLDTAEVEFI 417
V+C KL EK I + +S D ++E+ + N CK+ Y LD E+E +
Sbjct: 385 VTCGHKKL--EKGIQVELYSFPRDP-EIEMSGGLVNGSSVTVSCKVPSVYPLDRLEIELL 441
Query: 416 KSTCIRENLFF 384
K I EN+ F
Sbjct: 442 KGETILENIEF 452
>AF536818-1|AAM96190.1| 739|Homo sapiens vascular cell adhesion
molecule 1 protein.
Length = 739
Score = 32.3 bits (70), Expect = 2.2
Identities = 23/71 (32%), Positives = 34/71 (47%)
Frame = -3
Query: 596 VSCNKSKLLAEKTIGLAQHSAVSDNFKVEVENLISNFKENINLCKLTLPYNLDTAEVEFI 417
V+C KL EK I + +S D ++E+ + N CK+ Y LD E+E +
Sbjct: 385 VTCGHKKL--EKGIQVELYSFPRDP-EIEMSGGLVNGSSVTVSCKVPSVYPLDRLEIELL 441
Query: 416 KSTCIRENLFF 384
K I EN+ F
Sbjct: 442 KGETILENIEF 452
>BC104956-1|AAI04957.1| 1700|Homo sapiens SKIP protein protein.
Length = 1700
Score = 31.5 bits (68), Expect = 3.8
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Frame = -3
Query: 821 CYNKINXPXKTCIACNELNRLNSLWNNAKALLQNARALRMIGQFDEAEKKLRKAEI--LS 648
C + + P + AC ++ R NSL + LQN R IG ++ + L
Sbjct: 30 CGSSGSGPGNSITACKKVLRSNSLLESTDYWLQNQRMPCQIGFVEDKSENCASVCFVNLD 89
Query: 647 PNSEEMKTEAKLLQKL-KVSCNKSKLLAEKTI 555
N +E TE L QKL VS + KL++ +
Sbjct: 90 VNKDECSTE-HLQQKLVNVSPDLPKLISSMNV 120
>BC104954-1|AAI04955.1| 1700|Homo sapiens SKIP protein protein.
Length = 1700
Score = 31.5 bits (68), Expect = 3.8
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 3/92 (3%)
Frame = -3
Query: 821 CYNKINXPXKTCIACNELNRLNSLWNNAKALLQNARALRMIGQFDEAEKKLRKAEI--LS 648
C + + P + AC ++ R NSL + LQN R IG ++ + L
Sbjct: 30 CGSSGSGPGNSITACKKVLRSNSLLESTDYWLQNQRMPCQIGFVEDKSENCASVCFVNLD 89
Query: 647 PNSEEMKTEAKLLQKL-KVSCNKSKLLAEKTI 555
N +E TE L QKL VS + KL++ +
Sbjct: 90 VNKDECSTE-HLQQKLVNVSPDLPKLISSMNV 120
>BC101063-1|AAI01064.1| 929|Homo sapiens unc-45 homolog B (C.
elegans) protein.
Length = 929
Score = 31.5 bits (68), Expect = 3.8
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = -3
Query: 746 NNAKALLQNARALRMIGQFDEAEKKLRKAEILSP---NSEEM--KTEAKLLQKLKVSCNK 582
++ KAL + +AL +G+ D+A K +++ L P N +EM + + +KL+V +
Sbjct: 75 SDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKLRVQFST 134
Query: 581 SKLLAEKTIGLAQHSAVSDNFKVEVENLI 495
+ + L ++ +D + NLI
Sbjct: 135 DSRVQKMFEILLDENSEADKREKAANNLI 163
>BC101062-1|AAI01063.1| 850|Homo sapiens UNC45B protein protein.
Length = 850
Score = 31.5 bits (68), Expect = 3.8
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = -3
Query: 746 NNAKALLQNARALRMIGQFDEAEKKLRKAEILSP---NSEEM--KTEAKLLQKLKVSCNK 582
++ KAL + +AL +G+ D+A K +++ L P N +EM + + +KL+V +
Sbjct: 75 SDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKLRVQFST 134
Query: 581 SKLLAEKTIGLAQHSAVSDNFKVEVENLI 495
+ + L ++ +D + NLI
Sbjct: 135 DSRVQKMFEILLDENSEADKREKAANNLI 163
>AF539794-1|AAO13384.1| 931|Homo sapiens striated muscle UNC45
protein.
Length = 931
Score = 31.5 bits (68), Expect = 3.8
Identities = 22/89 (24%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Frame = -3
Query: 746 NNAKALLQNARALRMIGQFDEAEKKLRKAEILSP---NSEEM--KTEAKLLQKLKVSCNK 582
++ KAL + +AL +G+ D+A K +++ L P N +EM + + +KL+V +
Sbjct: 75 SDIKALYRRCQALEHLGKLDQAFKDVQRCATLEPRNQNFQEMLRRLNTSIQEKLRVQFST 134
Query: 581 SKLLAEKTIGLAQHSAVSDNFKVEVENLI 495
+ + L ++ +D + NLI
Sbjct: 135 DSRVQKMFEILLDENSEADKREKAANNLI 163
>X57500-1|CAA40736.1| 628|Homo sapiens nuclear factor IV protein.
Length = 628
Score = 31.1 bits (67), Expect = 5.0
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Frame = -3
Query: 686 EAEKK--LRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
EA+KK + EI N E+ T KL + + LAE ++ ++NF+V
Sbjct: 437 EAKKKDQVTAQEIFQDNHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 496
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVE-FIKS-TCIR----ENLFFNKIEK--DFVS 357
V+ ++F+E N + LDT E F+KS CIR E + F++ ++ +F+
Sbjct: 497 LVKQKKASFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQRFNNFLK 556
Query: 356 SKQEELSTCEKN 321
+ QE++ + N
Sbjct: 557 ALQEKVEIKQLN 568
>U89293-1|AAB72039.1| 936|Homo sapiens MSH4 protein.
Length = 936
Score = 31.1 bits (67), Expect = 5.0
Identities = 26/101 (25%), Positives = 48/101 (47%)
Frame = -3
Query: 698 GQFDEAEKKLRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNF 519
G+ A L+ +I+ + T AK++ KLK+ + +++ T AV ++
Sbjct: 169 GEIGMASIDLKNPQIILSQFADNTTYAKVITKLKI-LSPLEIIMSNTA-----CAVGNST 222
Query: 518 KVEVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRE 396
K+ + NFK N+N + Y +T +E+I+ CI E
Sbjct: 223 KL-FTLITENFK-NVNFTTIQRKYFNETKGLEYIEQLCIAE 261
>M30938-1|AAA36154.1| 732|Homo sapiens protein ( Human Ku (p70/p80)
subunit mRNA, complete cds. ).
Length = 732
Score = 31.1 bits (67), Expect = 5.0
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Frame = -3
Query: 686 EAEKK--LRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
EA+KK + EI N E+ T KL + + LAE ++ ++NF+V
Sbjct: 541 EAKKKDQVTAQEIFQDNHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 600
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVE-FIKS-TCIR----ENLFFNKIEK--DFVS 357
V+ ++F+E N + LDT E F+KS CIR E + F++ ++ +F+
Sbjct: 601 LVKQKKASFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQRFNNFLK 660
Query: 356 SKQEELSTCEKN 321
+ QE++ + N
Sbjct: 661 ALQEKVEIKQLN 672
>J04977-1|AAA59475.1| 732|Homo sapiens G22P1 protein.
Length = 732
Score = 31.1 bits (67), Expect = 5.0
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Frame = -3
Query: 686 EAEKK--LRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
EA+KK + EI N E+ T KL + + LAE ++ ++NF+V
Sbjct: 541 EAKKKDQVTAQEIFQDNHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 600
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVE-FIKS-TCIR----ENLFFNKIEK--DFVS 357
V+ ++F+E N + LDT E F+KS CIR E + F++ ++ +F+
Sbjct: 601 LVKQKKASFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQRFNNFLK 660
Query: 356 SKQEELSTCEKN 321
+ QE++ + N
Sbjct: 661 ALQEKVEIKQLN 672
>DQ787434-1|ABG46942.1| 732|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 5 (double-
protein.
Length = 732
Score = 31.1 bits (67), Expect = 5.0
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Frame = -3
Query: 686 EAEKK--LRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
EA+KK + EI N E+ T KL + + LAE ++ ++NF+V
Sbjct: 541 EAKKKDQVTAQEIFQDNHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 600
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVE-FIKS-TCIR----ENLFFNKIEK--DFVS 357
V+ ++F+E N + LDT E F+KS CIR E + F++ ++ +F+
Sbjct: 601 LVKQKKASFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQRFNNFLK 660
Query: 356 SKQEELSTCEKN 321
+ QE++ + N
Sbjct: 661 ALQEKVEIKQLN 672
>BC095442-1|AAH95442.1| 732|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 5 (double-
protein.
Length = 732
Score = 31.1 bits (67), Expect = 5.0
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Frame = -3
Query: 686 EAEKK--LRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
EA+KK + EI N E+ T KL + + LAE ++ ++NF+V
Sbjct: 541 EAKKKDQVTAQEIFQDNHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 600
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVE-FIKS-TCIR----ENLFFNKIEK--DFVS 357
V+ ++F+E N + LDT E F+KS CIR E + F++ ++ +F+
Sbjct: 601 LVKQKKASFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQRFNNFLK 660
Query: 356 SKQEELSTCEKN 321
+ QE++ + N
Sbjct: 661 ALQEKVEIKQLN 672
>BC033030-1|AAH33030.1| 936|Homo sapiens mutS homolog 4 (E. coli)
protein.
Length = 936
Score = 31.1 bits (67), Expect = 5.0
Identities = 26/101 (25%), Positives = 48/101 (47%)
Frame = -3
Query: 698 GQFDEAEKKLRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNF 519
G+ A L+ +I+ + T AK++ KLK+ + +++ T AV ++
Sbjct: 169 GEIGMASIDLKNPQIILSQFADNTTYAKVITKLKI-LSPLEIIMSNTA-----CAVGNST 222
Query: 518 KVEVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRE 396
K+ + NFK N+N + Y +T +E+I+ CI E
Sbjct: 223 KL-FTLITENFK-NVNFTTIQRKYFNETKGLEYIEQLCIAE 261
>BC019027-1|AAH19027.1| 732|Homo sapiens X-ray repair complementing
defective repair in Chinese hamster cells 5 (double-
protein.
Length = 732
Score = 31.1 bits (67), Expect = 5.0
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Frame = -3
Query: 686 EAEKK--LRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
EA+KK + EI N E+ T KL + + LAE ++ ++NF+V
Sbjct: 541 EAKKKDQVTAQEIFQDNHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 600
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVE-FIKS-TCIR----ENLFFNKIEK--DFVS 357
V+ ++F+E N + LDT E F+KS CIR E + F++ ++ +F+
Sbjct: 601 LVKQKKASFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQRFNNFLK 660
Query: 356 SKQEELSTCEKN 321
+ QE++ + N
Sbjct: 661 ALQEKVEIKQLN 672
>AY268350-1|AAP03427.1| 936|Homo sapiens mutS homolog 4 (E. coli)
protein.
Length = 936
Score = 31.1 bits (67), Expect = 5.0
Identities = 26/101 (25%), Positives = 48/101 (47%)
Frame = -3
Query: 698 GQFDEAEKKLRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNF 519
G+ A L+ +I+ + T AK++ KLK+ + +++ T AV ++
Sbjct: 169 GEIGMASIDLKNPQIILSQFADNTTYAKVITKLKI-LSPLEIIMSNTA-----CAVGNST 222
Query: 518 KVEVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRE 396
K+ + NFK N+N + Y +T +E+I+ CI E
Sbjct: 223 KL-FTLITENFK-NVNFTTIQRKYFNETKGLEYIEQLCIAE 261
>AL445464-2|CAH71812.1| 936|Homo sapiens mutS homolog 4 (E. coli)
protein.
Length = 936
Score = 31.1 bits (67), Expect = 5.0
Identities = 26/101 (25%), Positives = 48/101 (47%)
Frame = -3
Query: 698 GQFDEAEKKLRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNF 519
G+ A L+ +I+ + T AK++ KLK+ + +++ T AV ++
Sbjct: 169 GEIGMASIDLKNPQIILSQFADNTTYAKVITKLKI-LSPLEIIMSNTA-----CAVGNST 222
Query: 518 KVEVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRE 396
K+ + NFK N+N + Y +T +E+I+ CI E
Sbjct: 223 KL-FTLITENFK-NVNFTTIQRKYFNETKGLEYIEQLCIAE 261
>AL357314-6|CAI22394.1| 936|Homo sapiens mutS homolog 4 (E. coli)
protein.
Length = 936
Score = 31.1 bits (67), Expect = 5.0
Identities = 26/101 (25%), Positives = 48/101 (47%)
Frame = -3
Query: 698 GQFDEAEKKLRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNF 519
G+ A L+ +I+ + T AK++ KLK+ + +++ T AV ++
Sbjct: 169 GEIGMASIDLKNPQIILSQFADNTTYAKVITKLKI-LSPLEIIMSNTA-----CAVGNST 222
Query: 518 KVEVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRE 396
K+ + NFK N+N + Y +T +E+I+ CI E
Sbjct: 223 KL-FTLITENFK-NVNFTTIQRKYFNETKGLEYIEQLCIAE 261
>AK222603-1|BAD96323.1| 732|Homo sapiens ATP-dependent DNA helicase
II variant protein.
Length = 732
Score = 31.1 bits (67), Expect = 5.0
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Frame = -3
Query: 686 EAEKK--LRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
EA+KK + EI N E+ T KL + + LAE ++ ++NF+V
Sbjct: 541 EAKKKDQVTAQEIFQDNHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 600
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVE-FIKS-TCIR----ENLFFNKIEK--DFVS 357
V+ ++F+E N + LDT E F+KS CIR E + F++ ++ +F+
Sbjct: 601 LVKQKKASFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQRFNNFLK 660
Query: 356 SKQEELSTCEKN 321
+ QE++ + N
Sbjct: 661 ALQEKVEIKQLN 672
>AF104243-1|AAD17920.1| 936|Homo sapiens meiosis-specific MutS
homolog protein.
Length = 936
Score = 31.1 bits (67), Expect = 5.0
Identities = 26/101 (25%), Positives = 48/101 (47%)
Frame = -3
Query: 698 GQFDEAEKKLRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNF 519
G+ A L+ +I+ + T AK++ KLK+ + +++ T AV ++
Sbjct: 169 GEIGMASIDLKNPQIILSQFADNTTYAKVITKLKI-LSPLEIIMSNTA-----CAVGNST 222
Query: 518 KVEVENLISNFKENINLCKLTLPYNLDTAEVEFIKSTCIRE 396
K+ + NFK N+N + Y +T +E+I+ CI E
Sbjct: 223 KL-FTLITENFK-NVNFTTIQRKYFNETKGLEYIEQLCIAE 261
>AC012513-1|AAY24231.1| 568|Homo sapiens unknown protein.
Length = 568
Score = 31.1 bits (67), Expect = 5.0
Identities = 37/132 (28%), Positives = 64/132 (48%), Gaps = 10/132 (7%)
Frame = -3
Query: 686 EAEKK--LRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAEKTIGLAQHSAVSDNFKV 513
EA+KK + EI N E+ T KL + + LAE ++ ++NF+V
Sbjct: 377 EAKKKDQVTAQEIFQDNHEDGPTAKKLKTEQGGAHFSVSSLAEGSVTSVGSVNPAENFRV 436
Query: 512 EVENLISNFKENINLCKLTLPYNLDTAEVE-FIKS-TCIR----ENLFFNKIEK--DFVS 357
V+ ++F+E N + LDT E F+KS CIR E + F++ ++ +F+
Sbjct: 437 LVKQKKASFEEASNQLINHIEQFLDTNETPYFMKSIDCIRAFREEAIKFSEEQRFNNFLK 496
Query: 356 SKQEELSTCEKN 321
+ QE++ + N
Sbjct: 497 ALQEKVEIKQLN 508
>BC022363-1|AAH22363.1| 174|Homo sapiens VPS37A protein protein.
Length = 174
Score = 30.7 bits (66), Expect = 6.7
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Frame = -3
Query: 737 KALLQNARALRMIGQFDEAEKK--LRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAE 564
K++ + AR ++ EA+++ L K E+L+ + + + +L SC+ S L A
Sbjct: 51 KSIEELARKNLLLEPSLEAKRQTVLDKYELLTQMKSTFEKKMQRQHELSESCSASALQAR 110
Query: 563 KTIGLAQHSAVSDNF-------KVEVENLISNFKENINLC 465
+ + SDN K+E+++ +S+F E +C
Sbjct: 111 LKVAAHEAEEESDNIAEDFLEGKMEIDDFLSSFMEKRTIC 150
>AY033079-1|AAK54349.1| 397|Homo sapiens hepatocellular carcinoma
related protein 1 protein.
Length = 397
Score = 30.7 bits (66), Expect = 6.7
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Frame = -3
Query: 737 KALLQNARALRMIGQFDEAEKK--LRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAE 564
K++ + AR ++ EA+++ L K E+L+ + + + +L SC+ S L A
Sbjct: 274 KSIEELARKNLLLEPSLEAKRQTVLDKYELLTQMKSTFEKKMQRQHELSESCSASALQAR 333
Query: 563 KTIGLAQHSAVSDNF-------KVEVENLISNFKENINLC 465
+ + SDN K+E+++ +S+F E +C
Sbjct: 334 LKVAAHEAEEESDNIAEDFLEGKMEIDDFLSSFMEKRTIC 373
>AK057204-1|BAB71381.1| 397|Homo sapiens protein ( Homo sapiens
cDNA FLJ32642 fis, clone SYNOV2001144. ).
Length = 397
Score = 30.7 bits (66), Expect = 6.7
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Frame = -3
Query: 737 KALLQNARALRMIGQFDEAEKK--LRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAE 564
K++ + AR ++ EA+++ L K E+L+ + + + +L SC+ S L A
Sbjct: 274 KSIEELARKNLLLEPSLEAKRQTVLDKYELLTQMKSTFERKMQRQHELSESCSASALQAR 333
Query: 563 KTIGLAQHSAVSDNF-------KVEVENLISNFKENINLC 465
+ + SDN K+E+++ +S+F E +C
Sbjct: 334 LKVAAHEAEEESDNIAEDFLEGKMEIDDFLSSFMEKRTIC 373
>AF547097-1|AAQ12067.1| 372|Homo sapiens hcrp1 beta protein.
Length = 372
Score = 30.7 bits (66), Expect = 6.7
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Frame = -3
Query: 737 KALLQNARALRMIGQFDEAEKK--LRKAEILSPNSEEMKTEAKLLQKLKVSCNKSKLLAE 564
K++ + AR ++ EA+++ L K E+L+ + + + +L SC+ S L A
Sbjct: 249 KSIEELARKNLLLEPSLEAKRQTVLDKYELLTQMKSTFEKKMQRQHELSESCSASALQAR 308
Query: 563 KTIGLAQHSAVSDNF-------KVEVENLISNFKENINLC 465
+ + SDN K+E+++ +S+F E +C
Sbjct: 309 LKVAAHEAEEESDNIAEDFLEGKMEIDDFLSSFMEKRTIC 348
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,247,929
Number of Sequences: 237096
Number of extensions: 1674897
Number of successful extensions: 11321
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 11191
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11310
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10259383312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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