Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12f02
(792 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC029130-1|AAH29130.1| 141|Homo sapiens chromosome 6 open readi... 84 5e-16
AL607068-2|CAI17123.1| 141|Homo sapiens chromosome 6 open readi... 84 5e-16
AL390955-1|CAI23394.1| 141|Homo sapiens chromosome 6 open readi... 84 5e-16
AK000891-1|BAA91409.1| 141|Homo sapiens protein ( Homo sapiens ... 84 5e-16
AL390955-2|CAI23395.1| 128|Homo sapiens chromosome 6 open readi... 75 2e-13
BC008378-1|AAH08378.1| 344|Homo sapiens programmed cell death 2... 62 2e-09
AY948416-1|AAX51225.1| 311|Homo sapiens programmed cell death 2... 62 2e-09
AL031259-2|CAA20285.1| 344|Homo sapiens programmed cell death 2... 62 2e-09
S78085-1|AAB34865.1| 344|Homo sapiens PDCD2 protein. 61 5e-09
BC139732-1|AAI39733.1| 581|Homo sapiens SPIRE2 protein protein. 32 2.7
BC111030-1|AAI11031.1| 666|Homo sapiens SPIRE2 protein protein. 32 2.7
BC063706-1|AAH63706.1| 269|Homo sapiens SPIRE2 protein protein. 32 2.7
AJ422077-1|CAD19439.1| 728|Homo sapiens Spir-2 protein protein. 32 2.7
AB058735-1|BAB47461.1| 694|Homo sapiens KIAA1832 protein protein. 32 2.7
BC006146-1|AAH06146.1| 358|Homo sapiens programmed cell death 2... 30 8.3
>BC029130-1|AAH29130.1| 141|Homo sapiens chromosome 6 open reading
frame 35 protein.
Length = 141
Score = 84.2 bits (199), Expect = 5e-16
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = -3
Query: 775 ITGISALIGFSATLSTAKKSDPKYFSKGLHGGAELGDAGAILALRALGWGTLYAVAGTGF 596
+ L GF TLS AKK P++F+KG A L ++G+ LALRALGWG+LYA G G
Sbjct: 37 VAAAGMLAGFITTLSLAKKKSPEWFNKGSMATAALPESGSSLALRALGWGSLYAWCGVGV 96
Query: 595 LCYGIWKLSGAKDLKDFRVKM 533
+ + +WK G + DFR KM
Sbjct: 97 ISFAVWKALGVHSMNDFRSKM 117
>AL607068-2|CAI17123.1| 141|Homo sapiens chromosome 6 open reading
frame 35 protein.
Length = 141
Score = 84.2 bits (199), Expect = 5e-16
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = -3
Query: 775 ITGISALIGFSATLSTAKKSDPKYFSKGLHGGAELGDAGAILALRALGWGTLYAVAGTGF 596
+ L GF TLS AKK P++F+KG A L ++G+ LALRALGWG+LYA G G
Sbjct: 37 VAAAGMLAGFITTLSLAKKKSPEWFNKGSMATAALPESGSSLALRALGWGSLYAWCGVGV 96
Query: 595 LCYGIWKLSGAKDLKDFRVKM 533
+ + +WK G + DFR KM
Sbjct: 97 ISFAVWKALGVHSMNDFRSKM 117
>AL390955-1|CAI23394.1| 141|Homo sapiens chromosome 6 open reading
frame 35 protein.
Length = 141
Score = 84.2 bits (199), Expect = 5e-16
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = -3
Query: 775 ITGISALIGFSATLSTAKKSDPKYFSKGLHGGAELGDAGAILALRALGWGTLYAVAGTGF 596
+ L GF TLS AKK P++F+KG A L ++G+ LALRALGWG+LYA G G
Sbjct: 37 VAAAGMLAGFITTLSLAKKKSPEWFNKGSMATAALPESGSSLALRALGWGSLYAWCGVGV 96
Query: 595 LCYGIWKLSGAKDLKDFRVKM 533
+ + +WK G + DFR KM
Sbjct: 97 ISFAVWKALGVHSMNDFRSKM 117
>AK000891-1|BAA91409.1| 141|Homo sapiens protein ( Homo sapiens
cDNA FLJ10029 fis, clone HEMBA1000817. ).
Length = 141
Score = 84.2 bits (199), Expect = 5e-16
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = -3
Query: 775 ITGISALIGFSATLSTAKKSDPKYFSKGLHGGAELGDAGAILALRALGWGTLYAVAGTGF 596
+ L GF TLS AKK P++F+KG A L ++G+ LALRALGWG+LYA G G
Sbjct: 37 VAAAGMLAGFITTLSLAKKKSPEWFNKGSMATAALPESGSSLALRALGWGSLYAWCGVGV 96
Query: 595 LCYGIWKLSGAKDLKDFRVKM 533
+ + +WK G + DFR KM
Sbjct: 97 ISFAVWKALGVHSMNDFRSKM 117
>AL390955-2|CAI23395.1| 128|Homo sapiens chromosome 6 open reading
frame 35 protein.
Length = 128
Score = 75.4 bits (177), Expect = 2e-13
Identities = 33/77 (42%), Positives = 47/77 (61%)
Frame = -3
Query: 775 ITGISALIGFSATLSTAKKSDPKYFSKGLHGGAELGDAGAILALRALGWGTLYAVAGTGF 596
+ L GF TLS AKK P++F+KG A L ++G+ LALRALGWG+LYA G G
Sbjct: 37 VAAAGMLAGFITTLSLAKKKSPEWFNKGSMATAALPESGSSLALRALGWGSLYAWCGVGV 96
Query: 595 LCYGIWKLSGAKDLKDF 545
+ + +WK G + ++
Sbjct: 97 ISFAVWKALGVHSVSNY 113
>BC008378-1|AAH08378.1| 344|Homo sapiens programmed cell death 2
protein.
Length = 344
Score = 62.5 bits (145), Expect = 2e-09
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +3
Query: 198 QF*IMPQLLNFLDVGVELNSIDWGVLAIYTCKASCNKGSAYMLEYMIKQDLSD 356
+F +MPQLLN+L SIDWG+LA++TC SC+ G+ Y E++ KQD++D
Sbjct: 290 EFQVMPQLLNYLKADRLGKSIDWGILAVFTCAESCSLGTGYTEEFVWKQDVTD 342
>AY948416-1|AAX51225.1| 311|Homo sapiens programmed cell death 2
isoform 1 protein.
Length = 311
Score = 62.5 bits (145), Expect = 2e-09
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +3
Query: 198 QF*IMPQLLNFLDVGVELNSIDWGVLAIYTCKASCNKGSAYMLEYMIKQDLSD 356
+F +MPQLLN+L SIDWG+LA++TC SC+ G+ Y E++ KQD++D
Sbjct: 257 EFQVMPQLLNYLKADRLGKSIDWGILAVFTCAESCSLGTGYTEEFVWKQDVTD 309
>AL031259-2|CAA20285.1| 344|Homo sapiens programmed cell death 2
protein.
Length = 344
Score = 62.5 bits (145), Expect = 2e-09
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +3
Query: 198 QF*IMPQLLNFLDVGVELNSIDWGVLAIYTCKASCNKGSAYMLEYMIKQDLSD 356
+F +MPQLLN+L SIDWG+LA++TC SC+ G+ Y E++ KQD++D
Sbjct: 290 EFQVMPQLLNYLKADRLGKSIDWGILAVFTCAESCSLGTGYTEEFVWKQDVTD 342
>S78085-1|AAB34865.1| 344|Homo sapiens PDCD2 protein.
Length = 344
Score = 60.9 bits (141), Expect = 5e-09
Identities = 26/53 (49%), Positives = 37/53 (69%)
Frame = +3
Query: 198 QF*IMPQLLNFLDVGVELNSIDWGVLAIYTCKASCNKGSAYMLEYMIKQDLSD 356
+F +MPQLLN+L SIDWG+LA +TC SC+ G+ Y E++ KQD++D
Sbjct: 290 EFQVMPQLLNYLKADRLGKSIDWGILAAFTCAESCSLGTGYTEEFVWKQDVTD 342
>BC139732-1|AAI39733.1| 581|Homo sapiens SPIRE2 protein protein.
Length = 581
Score = 31.9 bits (69), Expect = 2.7
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 641 SLRMGYTVCCCRYWFPLL-WHLETFWCKR 558
SL+ G CCCR FPL W +CKR
Sbjct: 432 SLKKGKICCCCRAKFPLFSWPPSCLFCKR 460
>BC111030-1|AAI11031.1| 666|Homo sapiens SPIRE2 protein protein.
Length = 666
Score = 31.9 bits (69), Expect = 2.7
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 641 SLRMGYTVCCCRYWFPLL-WHLETFWCKR 558
SL+ G CCCR FPL W +CKR
Sbjct: 565 SLKKGKICCCCRAKFPLFSWPPSCLFCKR 593
>BC063706-1|AAH63706.1| 269|Homo sapiens SPIRE2 protein protein.
Length = 269
Score = 31.9 bits (69), Expect = 2.7
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 641 SLRMGYTVCCCRYWFPLL-WHLETFWCKR 558
SL+ G CCCR FPL W +CKR
Sbjct: 120 SLKKGKICCCCRAKFPLFSWPPSCLFCKR 148
>AJ422077-1|CAD19439.1| 728|Homo sapiens Spir-2 protein protein.
Length = 728
Score = 31.9 bits (69), Expect = 2.7
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 641 SLRMGYTVCCCRYWFPLL-WHLETFWCKR 558
SL+ G CCCR FPL W +CKR
Sbjct: 579 SLKKGKICCCCRAKFPLFSWPPSCLFCKR 607
>AB058735-1|BAB47461.1| 694|Homo sapiens KIAA1832 protein protein.
Length = 694
Score = 31.9 bits (69), Expect = 2.7
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -2
Query: 641 SLRMGYTVCCCRYWFPLL-WHLETFWCKR 558
SL+ G CCCR FPL W +CKR
Sbjct: 545 SLKKGKICCCCRAKFPLFSWPPSCLFCKR 573
>BC006146-1|AAH06146.1| 358|Homo sapiens programmed cell death
2-like protein.
Length = 358
Score = 30.3 bits (65), Expect = 8.3
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = +3
Query: 198 QF*IMPQLLNFLDVGVELNSIDWGVLAIYTCKASC 302
+F +MP L++ L S+++G + +YTC+ SC
Sbjct: 299 EFQLMPALVSMLKSANLGLSVEFGTILVYTCEKSC 333
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,173,007
Number of Sequences: 237096
Number of extensions: 1885971
Number of successful extensions: 3407
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3278
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3407
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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