Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12e24
         (676 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69981-1|CAA93821.1|  327|Anopheles gambiae maltase precursor pr...   159   7e-41
X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein...   146   4e-37
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...   124   2e-30
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   1.3  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    24   5.0  
AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.        23   8.8  

>Z69981-1|CAA93821.1|  327|Anopheles gambiae maltase precursor
           protein.
          Length = 327

 Score =  159 bits (386), Expect = 7e-41
 Identities = 81/205 (39%), Positives = 123/205 (60%), Gaps = 2/205 (0%)
 Frame = -1

Query: 670 VDALNMLILLLPGIAITYMGEEIGMVNGFVPWSETKDPLACNTDDPVNYIEVSRDPVRTP 491
           +DALNM++L L G ++TY GEEIGM + ++ W +T DP ACN    + Y E SRDP RTP
Sbjct: 102 IDALNMVLLSLSGASVTYQGEEIGMTDVYISWEDTVDPAACNAGKDL-YAEKSRDPCRTP 160

Query: 490 FQWNSGKNGGFSTAERTWLPVADGYESLNVASQRSAVRSHYQVYRTLTNLRIRPAFRLGR 311
           FQW+     GF+T  +TWLPV D Y  +NV +Q +A +SH +VY+++  LR    ++LG 
Sbjct: 161 FQWDDPAMAGFTTGSKTWLPVGDRYREVNVQAQLAAEKSHLKVYQSMMELRKTKTYQLGT 220

Query: 310 YESLSLNNDVFAFKR-WYNDDTYIIVMNVGKRDRIVN-LTAFDLVFGQLEVEASSVLSSR 137
            ++++L + V A  R   N  TYI + N G +  +++ +T  D + G+L  E  SV S  
Sbjct: 221 VKAVALGDSVLAVVRELTNFGTYITLANFGSQIEVISGITLADALPGKLYFEVVSVNSHN 280

Query: 136 TYSDNVQANRLDLAVDEALVLRMQV 62
               ++    + L  +EA VL+ Q+
Sbjct: 281 IRGGSMATKDIVLLPNEAFVLKAQI 305


>X87411-1|CAA60858.1|  599|Anopheles gambiae maltase-like protein
           Agm2 protein.
          Length = 599

 Score =  146 bits (355), Expect = 4e-37
 Identities = 81/205 (39%), Positives = 122/205 (59%), Gaps = 5/205 (2%)
 Frame = -1

Query: 673 LVDALNMLILLLPGIAITYMGEEIGMVNGFVPWSETKDPLACNTDDPVNYIEVSRDPVRT 494
           +VD + M+ L LPGI +TY GEEIGM +  + W++T+DP AC   +   Y E +RDP RT
Sbjct: 367 MVDIMAMIELTLPGITVTYQGEEIGMHDVDISWADTQDPAACQLTEE-TYQEGTRDPART 425

Query: 493 PFQWNSGKNGGFSTAE-RTWLPVADGYESLNVASQR-SAVRSHYQVYRTLTNLRIRPAFR 320
           PFQW+S  N GF+ A  + WLP+A  Y  +NV +Q+ SA  SH +V++ L NLR      
Sbjct: 426 PFQWDSTANAGFTNASVKPWLPLATDYPLVNVKTQQESAQNSHIKVFKELMNLRGTNTLI 485

Query: 319 LGRYESLSLNNDVFAFKRWYNDD--TYIIVMNVGKRDRIVNLTAFD-LVFGQLEVEASSV 149
            G ++SL L  +V+A  R + +D  TY+++ N+G +  I++ T  D  +  +L     SV
Sbjct: 486 WGSFKSLVLGENVYAILRSFPNDKRTYVVLANIGSKSEIIDATKLDNSLPNELVFRVVSV 545

Query: 148 LSSRTYSDNVQANRLDLAVDEALVL 74
            S+    ++V  N + L   EA+VL
Sbjct: 546 SSNHITGESVATNNILLQPYEAVVL 570


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score =  124 bits (300), Expect = 2e-30
 Identities = 53/116 (45%), Positives = 79/116 (68%)
 Frame = -1

Query: 667 DALNMLILLLPGIAITYMGEEIGMVNGFVPWSETKDPLACNTDDPVNYIEVSRDPVRTPF 488
           D   + + +LPG+A+TY G+E+ M + F+ W +T DP ACN++ P +Y+  SRDPVRTPF
Sbjct: 374 DLYQIALNVLPGVAVTYNGDELAMEDVFISWKDTIDPAACNSN-PKDYLLYSRDPVRTPF 432

Query: 487 QWNSGKNGGFSTAERTWLPVADGYESLNVASQRSAVRSHYQVYRTLTNLRIRPAFR 320
           QW+   + GFST   TWLPVA  Y++LN  +Q++A RSH ++++ L  LR +   R
Sbjct: 433 QWDDSVSAGFSTNRTTWLPVASNYKTLNYKAQKAAARSHVKIFKALVRLRKQRTLR 488


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 434 KPGSLCSRKSSVFPGVPLERRPDGVPG 514
           +PG+   +  +  PGVP  R  DG+PG
Sbjct: 306 EPGAASEKGQNGEPGVPGLRGNDGIPG 332


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1222

 Score = 23.8 bits (49), Expect = 5.0
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -1

Query: 556  LACNTDDPVNYIEVSRDPVRTPFQWNS 476
            L   T DPVN   +    + +P +WNS
Sbjct: 978  LGYGTSDPVNENNLGMKLLESPERWNS 1004


>AY578804-1|AAT07309.1|  133|Anopheles gambiae maverick protein.
          Length = 133

 Score = 23.0 bits (47), Expect = 8.8
 Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
 Frame = +1

Query: 508 PGTLRCNSQDRQCCR-PVDPSFRSKE 582
           P T  C + +++CCR P+   FR  E
Sbjct: 21  PKTTACTAGNKRCCRHPLLVDFRDIE 46


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 686,810
Number of Sequences: 2352
Number of extensions: 15473
Number of successful extensions: 34
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)