Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12e20
         (767 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2305|AAN13731.1|   91|Drosophila melanogaster CG5184-PB...    31   1.3  
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    30   3.0  
J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid pr...    29   7.0  
AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p pro...    29   7.0  
AY070882-1|AAL48504.1|  518|Drosophila melanogaster LD16673p pro...    29   7.0  
AY060442-1|AAL25481.1|  518|Drosophila melanogaster LD47433p pro...    29   7.0  
AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA...    29   7.0  
AE013599-1652|AAF58414.3|  518|Drosophila melanogaster CG17724-P...    29   7.0  

>AE014297-2305|AAN13731.1|   91|Drosophila melanogaster CG5184-PB,
           isoform B protein.
          Length = 91

 Score = 31.5 bits (68), Expect = 1.3
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = +3

Query: 396 CPMATFAKHPTTKLFVHKSDK 458
           CP ATFA HPTT+LF  +  K
Sbjct: 67  CPSATFAFHPTTQLFPSRITK 87


>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
             protein.
          Length = 23015

 Score = 30.3 bits (65), Expect = 3.0
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = +1

Query: 166   IRNRLTCPCHGSCEVSAQECTMSSSVPYCS 255
             IR++   PC G C + A  CTM++ +P CS
Sbjct: 20756 IRSKCQDPCPGVCGLEAI-CTMNNHIPICS 20784



 Score = 29.9 bits (64), Expect = 4.0
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = +1

Query: 166   IRNRLTCPCHGSCEVSAQECTMSSSVPYC 252
             +RN+   PC G+C V+A  C +++ +P C
Sbjct: 13848 VRNKCIDPCSGTCGVNAL-CEVNNHIPIC 13875



 Score = 29.9 bits (64), Expect = 4.0
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +1

Query: 187   PCHGSCEVSAQECTMSSSVPYC 252
             PC GSC  SAQ CT+S  +P C
Sbjct: 20652 PCPGSCGQSAQ-CTVSLHIPNC 20672



 Score = 29.1 bits (62), Expect = 7.0
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = +1

Query: 166   IRNRLTCPCHGSCEVSAQECTMSSSVPYC 252
             IR R   PC GSC  +A EC++ +  P C
Sbjct: 13105 IRERCIDPCPGSCGYAA-ECSVVNHTPIC 13132


>J03251-1|AAA28714.1|  846|Drosophila melanogaster myospheroid
           protein protein.
          Length = 846

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 184 CPCHGSCEVSAQECTMSSSVPYCSRWSCRK*STYQK*CNQLEFKPLCEL 330
           C  HG+CE    +CT++    +  R  C K  T    C +L+    C++
Sbjct: 656 CSGHGTCECGVCKCTVNDQGRFSGR-HCEKCPTCSGRCQELKDCVQCQM 703


>AY113499-1|AAM29504.1|  846|Drosophila melanogaster RE55238p
           protein.
          Length = 846

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 184 CPCHGSCEVSAQECTMSSSVPYCSRWSCRK*STYQK*CNQLEFKPLCEL 330
           C  HG+CE    +CT++    +  R  C K  T    C +L+    C++
Sbjct: 656 CSGHGTCECGVCKCTVNDQGRFSGR-HCEKCPTCSGRCQELKDCVQCQM 703


>AY070882-1|AAL48504.1|  518|Drosophila melanogaster LD16673p
           protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +1

Query: 382 FVRFCVRWQPLPNIQLPNFLYINPINASTKVEPPRTRSQLESSG 513
           FV    R  P+PN    + +     NA+  + PP+T S   SSG
Sbjct: 108 FVTHSSRTSPMPNPPAQSHVPPTTRNATNAILPPKTNSSSSSSG 151


>AY060442-1|AAL25481.1|  518|Drosophila melanogaster LD47433p
           protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +1

Query: 382 FVRFCVRWQPLPNIQLPNFLYINPINASTKVEPPRTRSQLESSG 513
           FV    R  P+PN    + +     NA+  + PP+T S   SSG
Sbjct: 108 FVTHSSRTSPMPNPPAQSHVPPTTRNATNAILPPKTNSSSSSSG 151


>AE014298-1112|AAF46313.2|  846|Drosophila melanogaster CG1560-PA
           protein.
          Length = 846

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 184 CPCHGSCEVSAQECTMSSSVPYCSRWSCRK*STYQK*CNQLEFKPLCEL 330
           C  HG+CE    +CT++    +  R  C K  T    C +L+    C++
Sbjct: 656 CSGHGTCECGVCKCTVNDQGRFSGR-HCEKCPTCSGRCQELKDCVQCQM 703


>AE013599-1652|AAF58414.3|  518|Drosophila melanogaster CG17724-PA,
           isoform A protein.
          Length = 518

 Score = 29.1 bits (62), Expect = 7.0
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +1

Query: 382 FVRFCVRWQPLPNIQLPNFLYINPINASTKVEPPRTRSQLESSG 513
           FV    R  P+PN    + +     NA+  + PP+T S   SSG
Sbjct: 108 FVTHSSRTSPMPNPPAQSHVPPTTRNATNAILPPKTNSSSSSSG 151


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,424,312
Number of Sequences: 53049
Number of extensions: 625620
Number of successful extensions: 1497
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1497
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3540671772
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)