Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12e18
(788 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 447 e-126
03_01_0034 + 318432-318825,318902-319851 445 e-125
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 445 e-125
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 445 e-125
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 444 e-125
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 444 e-125
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 443 e-125
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 437 e-123
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 207 7e-54
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 202 2e-52
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 202 3e-52
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 201 4e-52
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 116 2e-26
03_06_0181 - 32180321-32180491,32180849-32181010 29 3.2
02_01_0788 - 5912821-5913392,5913453-5913953,5914030-5914117 29 3.2
08_02_1008 - 23508377-23508541,23508940-23509116 29 5.6
05_01_0120 - 828834-831143 29 5.6
03_06_0386 + 33555682-33556344,33557138-33557299 29 5.6
03_06_0704 + 35641774-35642031,35642122-35642446,35642546-356426... 28 7.4
09_02_0204 - 5768596-5768793,5769857-5770006,5770407-5770583 28 9.7
07_01_0756 + 5819367-5820038,5820847-5821005 28 9.7
05_04_0035 + 17378541-17381276 28 9.7
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 447 bits (1101), Expect = e-126
Identities = 200/229 (87%), Positives = 222/229 (96%)
Frame = -3
Query: 786 IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFP 607
+DNEALYDICFRTLKL TPT+GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFP
Sbjct: 202 LDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFP 261
Query: 606 RLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRM 427
RLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+M
Sbjct: 262 RLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKM 321
Query: 426 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRI 247
S KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPPRGLKM+ATF+GN+T+IQE+F+R+
Sbjct: 322 STKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPRGLKMAATFVGNSTSIQEMFRRV 381
Query: 246 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 100
SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 445 bits (1096), Expect = e-125
Identities = 200/229 (87%), Positives = 221/229 (96%)
Frame = -3
Query: 786 IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFP 607
+DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFP
Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFP 261
Query: 606 RLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRM 427
RLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+M
Sbjct: 262 RLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKM 321
Query: 426 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRI 247
S KEVDEQMLN+QNKNSSYFVEWIPNNVK+ VCDIPP GLKM++TFIGN+T+IQE+F+R+
Sbjct: 322 STKEVDEQMLNVQNKNSSYFVEWIPNNVKSTVCDIPPTGLKMASTFIGNSTSIQEMFRRV 381
Query: 246 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 100
SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 445 bits (1096), Expect = e-125
Identities = 199/229 (86%), Positives = 222/229 (96%)
Frame = -3
Query: 786 IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFP 607
+DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFP
Sbjct: 223 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFP 282
Query: 606 RLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRM 427
RLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+M
Sbjct: 283 RLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKM 342
Query: 426 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRI 247
S KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGN+T+IQE+F+R+
Sbjct: 343 STKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRV 402
Query: 246 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 100
SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 403 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 451
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 445 bits (1096), Expect = e-125
Identities = 199/229 (86%), Positives = 222/229 (96%)
Frame = -3
Query: 786 IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFP 607
+DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFP
Sbjct: 202 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFP 261
Query: 606 RLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRM 427
RLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+M
Sbjct: 262 RLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKM 321
Query: 426 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRI 247
S KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL M++TFIGN+T+IQE+F+R+
Sbjct: 322 STKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFIGNSTSIQEMFRRV 381
Query: 246 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 100
SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 430
>05_04_0306 + 20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 444 bits (1095), Expect = e-125
Identities = 198/229 (86%), Positives = 222/229 (96%)
Frame = -3
Query: 786 IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFP 607
+DNEALYDICFRTLKLTTP++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFP
Sbjct: 382 LDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFP 441
Query: 606 RLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRM 427
RLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+M
Sbjct: 442 RLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKM 501
Query: 426 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRI 247
S KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPPRGL M++TF+GN+T+IQE+F+R+
Sbjct: 502 STKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPRGLSMASTFVGNSTSIQEMFRRV 561
Query: 246 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 100
SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA
Sbjct: 562 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 610
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 444 bits (1094), Expect = e-125
Identities = 199/229 (86%), Positives = 221/229 (96%)
Frame = -3
Query: 786 IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFP 607
+DNEALYDICFRTLKL TPT+GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFP
Sbjct: 202 LDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFP 261
Query: 606 RLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRM 427
RLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+M
Sbjct: 262 RLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKM 321
Query: 426 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRI 247
S KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPP GLKM++TFIGN+T+IQE+F+R+
Sbjct: 322 STKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPNGLKMASTFIGNSTSIQEMFRRV 381
Query: 246 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 100
SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 443 bits (1091), Expect = e-125
Identities = 199/229 (86%), Positives = 221/229 (96%)
Frame = -3
Query: 786 IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFP 607
+DNEALYDICFRTLKL TPT+GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFP
Sbjct: 202 LDNEALYDICFRTLKLATPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFP 261
Query: 606 RLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRM 427
RLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRG+M
Sbjct: 262 RLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKM 321
Query: 426 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRI 247
S KEVDEQMLN+QNKNSSYFVEWIPNNVK++VCDIPP GLKM++TFIGN+T+IQE+F+R+
Sbjct: 322 STKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIPPIGLKMASTFIGNSTSIQEMFRRV 381
Query: 246 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 100
SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 382 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATA 430
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 437 bits (1076), Expect = e-123
Identities = 195/229 (85%), Positives = 219/229 (95%)
Frame = -3
Query: 786 IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFP 607
+DNEALYDICFRTLKLT P++GDLNHL+SATMSGVT CLRFPGQLN+DLRKLAVN++PFP
Sbjct: 218 LDNEALYDICFRTLKLTNPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKLAVNLIPFP 277
Query: 606 RLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRM 427
RLHFFM GFAPLTSRGSQQYRAL+VPELTQQM+DAKNMM A DPRHGRYLT +A+FRGRM
Sbjct: 278 RLHFFMVGFAPLTSRGSQQYRALTVPELTQQMWDAKNMMCAADPRHGRYLTASAMFRGRM 337
Query: 426 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQELFKRI 247
S KEVDEQM+N+QNKNSSYFVEWIPNNVK++VCDIPP GL M++TF+GN+T+IQE+F+R+
Sbjct: 338 STKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLSMASTFVGNSTSIQEMFRRV 397
Query: 246 SEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATA 100
SEQFTAMFRRKAFLHWYT EGMDEMEFTEAESNMNDLV+EYQQYQDATA
Sbjct: 398 SEQFTAMFRRKAFLHWYTSEGMDEMEFTEAESNMNDLVAEYQQYQDATA 446
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 207 bits (506), Expect = 7e-54
Identities = 92/231 (39%), Positives = 143/231 (61%), Gaps = 8/231 (3%)
Frame = -3
Query: 786 IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFP 607
+DNEA+YDIC R+L + PTY +LN L+S +S +TT LRF G +N D+ + N+VP+P
Sbjct: 204 LDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAINVDVTEFQTNLVPYP 263
Query: 606 RLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRM 427
R+HF + +AP+ S + LSVPE+T +F+ +MMA CDPRHG+Y+ ++RG +
Sbjct: 264 RIHFMLSSYAPVISAEKAYHEQLSVPEITNAVFEPSSMMAKCDPRHGKYMACCLMYRGDV 323
Query: 426 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTA 271
K+V+ + I+ K + FV+W P K + PP ++ + I N TA
Sbjct: 324 VPKDVNAAVATIKTKRTVQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNNTA 383
Query: 270 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 118
+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 VAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 202 bits (494), Expect = 2e-52
Identities = 91/231 (39%), Positives = 141/231 (61%), Gaps = 8/231 (3%)
Frame = -3
Query: 786 IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFP 607
+DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+P
Sbjct: 204 LDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYP 263
Query: 606 RLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRM 427
R+HF + +AP+ S + LSV E+T F+ +MMA CDPRHG+Y+ ++RG +
Sbjct: 264 RIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDV 323
Query: 426 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTA 271
K+V+ + I+ K + FV+W P K + PP ++ + I N+T+
Sbjct: 324 VPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPSGDLAKVQRAVCMISNSTS 383
Query: 270 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 118
+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 VVEVFSRIDHKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 202 bits (493), Expect = 3e-52
Identities = 89/231 (38%), Positives = 143/231 (61%), Gaps = 8/231 (3%)
Frame = -3
Query: 786 IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFP 607
+DNEA+YDIC R+L + PTY +LN L+S +S +TT LRF G +N D+ + N+VP+P
Sbjct: 285 LDNEAIYDICKRSLDIERPTYTNLNRLISQVISSLTTSLRFDGAINVDITEFQTNLVPYP 344
Query: 606 RLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRM 427
R+HF + +AP+ S + SVPE+T +F+ ++MA CDPRHG+Y+ ++RG +
Sbjct: 345 RIHFMLSSYAPIISVEKAFHEQHSVPEITNSVFEPASVMAKCDPRHGKYMACCLMYRGDV 404
Query: 426 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRG--------LKMSATFIGNTTA 271
K+V+ + +I+ + + FV+W P K + PP ++ + I N TA
Sbjct: 405 VPKDVNAAVHSIKTRRTVQFVDWCPTGFKCGINYQPPTAVPGGDLAKVRRAVCMISNNTA 464
Query: 270 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 118
+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 465 VAEVFSRIDRKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 515
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 201 bits (491), Expect = 4e-52
Identities = 91/231 (39%), Positives = 141/231 (61%), Gaps = 8/231 (3%)
Frame = -3
Query: 786 IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFP 607
+DNEA+YDIC R+L + PTY +LN LVS +S +T LRF G LN D+ + N+VP+P
Sbjct: 204 LDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVNEFQTNLVPYP 263
Query: 606 RLHFFMPGFAPLTSRGSQQYRALSVPELTQQMFDAKNMMAACDPRHGRYLTVAAVFRGRM 427
R+HF + +AP+ S + LSV E+T F+ +MMA CDPRHG+Y+ ++RG +
Sbjct: 264 RIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDV 323
Query: 426 SMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPP--------RGLKMSATFIGNTTA 271
K+V+ + I+ K + FV+W P K + PP ++ + I N+T+
Sbjct: 324 VPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPSVVPGGDLAKVQRAVCMISNSTS 383
Query: 270 IQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQ 118
+ E+F RI +F M+ ++AF+HWY GEGM+E EF+EA ++ L +Y++
Sbjct: 384 VVEVFSRIDIKFDLMYSKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEE 434
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 116 bits (279), Expect = 2e-26
Identities = 71/232 (30%), Positives = 115/232 (49%), Gaps = 10/232 (4%)
Frame = -3
Query: 786 IDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFP 607
+DN AL I L L PT+ N LVS MS TT LR+PG +N DL L +++P P
Sbjct: 205 LDNTALNRIAVERLHLANPTFAQTNSLVSTVMSASTTTLRYPGYMNNDLVGLLASLIPTP 264
Query: 606 RLHFFMPGFAPLT-SRGSQQYRALSVPELTQQMFDAKNMMAACDPRH-----GRYLTVAA 445
R HF M G+ PLT R R +V ++ +++ KN+M + R+ +Y+++
Sbjct: 265 RCHFLMTGYTPLTVERQVNMIRKTTVLDVMRRLLQTKNIMVSSYARNKEASQAKYISILN 324
Query: 444 VFRGRMSMKEVDEQMLNIQNKNSSYFVEWIPNNVKTAVCDIPPRGLKMSATFIGNTTAIQ 265
+ +G + +V E + I+ + F+EW P +++S + N T+I+
Sbjct: 325 IIQGEVDPTQVHESLQRIRERKLVNFIEW------------GPASIQVSGLMLANHTSIR 372
Query: 264 ELFKRISEQFTAMFRRKAFLHWYTG----EGMDEMEFTEAESNMNDLVSEYQ 121
LF + Q+ + +++AFL Y E D EF E+ + LV EY+
Sbjct: 373 HLFSKCLGQYEKLRKKQAFLDNYRKFPMFEDNDLSEFDESREIIESLVDEYK 424
>03_06_0181 - 32180321-32180491,32180849-32181010
Length = 110
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +3
Query: 450 RRSDIYHGEGHRQPSCSWHQTFAASAPAQIE 542
R+ ++HGEG R+ S + +Q+F +SA Q++
Sbjct: 20 RQLQLFHGEGLRRLSPASYQSFCSSACGQVD 50
>02_01_0788 - 5912821-5913392,5913453-5913953,5914030-5914117
Length = 386
Score = 29.5 bits (63), Expect = 3.2
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Frame = +2
Query: 560 PREVNGAKPGIKKCNLGNGTMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPYVG-- 733
PR N +PG+ + + NG F + + PG R V+ P +V + SP G
Sbjct: 192 PRRTNSVRPGVAENLVKNG-----DFEEGPYIIPGTRWGVLIPSMVVDE---HSPLPGWM 243
Query: 734 VVSFKVLKQI 763
V S K +K I
Sbjct: 244 VESLKAVKYI 253
>08_02_1008 - 23508377-23508541,23508940-23509116
Length = 113
Score = 28.7 bits (61), Expect = 5.6
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 181 HTLPRVPVQESFSSEHGCKLFRNSFKQLLDSCGV 282
H + RV +E S+ GC + + +LD CGV
Sbjct: 51 HDIERVRNKEQLSTRVGCGRVHSIIENILDKCGV 84
>05_01_0120 - 828834-831143
Length = 769
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 627 PLVSANRRSVVLGIASTWSHQTLSLKPNGSSPHTLGLLASKS 752
P +S + S I+S +S + SL P+ SSP +LGL + S
Sbjct: 502 PFLSPSSLSSDSSISSKYSSDSPSLSPSTSSPTSLGLSPASS 543
>03_06_0386 + 33555682-33556344,33557138-33557299
Length = 274
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 617 TMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPY 727
T +F K+ F C +TPD +TK+ KSP+
Sbjct: 213 TKTLGNFVKATFDCLMKTYGFLTPDFWRDTKFVKSPF 249
>03_06_0704 +
35641774-35642031,35642122-35642446,35642546-35642699,
35643662-35643706,35644121-35644180,35644532-35644694,
35645356-35645717,35645985-35646303
Length = 561
Score = 28.3 bits (60), Expect = 7.4
Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
Frame = +2
Query: 395 LSICSSTSFIDIRPRKTAA--TVRYLPWRGSQAAIMFLASNICCVSSGTDRARYCWLPRE 568
LS SF+ ++P + ++PW S++C V+ G+D A W ++
Sbjct: 332 LSGQKKVSFLPVKPHTKGIINNINFMPW-----------SDVCFVTGGSDHAVILWQEKD 380
Query: 569 VNGAKPGIKKCNLGNGTMLTASF-RKSAFSCPGNRKHVVTPDIVA 700
+ + K + M A +KS G+ K +++ D+ A
Sbjct: 381 DSWNHKKVHKDLHSSAVMGVAGLQQKSTILSVGSDKRIISFDLAA 425
>09_02_0204 - 5768596-5768793,5769857-5770006,5770407-5770583
Length = 174
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +1
Query: 181 HTLPRVPVQESFSSEHGCKLFRNSFKQLLDSCGV 282
H + RV +E ++ GC + + +LD CGV
Sbjct: 51 HDIERVCNKEQLNTRVGCSRVHSIIENILDKCGV 84
>07_01_0756 + 5819367-5820038,5820847-5821005
Length = 276
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 617 TMLTASFRKSAFSCPGNRKHVVTPDIVAETKWFKSPY 727
T +F K+ F C +TPD ET++ K+P+
Sbjct: 216 TKTLGNFVKATFDCLMKTYGFLTPDFWRETRFIKTPF 252
>05_04_0035 + 17378541-17381276
Length = 911
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 418 LHRHPSAENGSDGQISTMARVTGSHHVL 501
LH HPS + S S A + +HH+L
Sbjct: 16 LHPHPSLSSSSSSTASPAAAASATHHLL 43
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,523,003
Number of Sequences: 37544
Number of extensions: 514152
Number of successful extensions: 1405
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1400
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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