Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12e16
(516 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q69FX2 Cluster: Promoting protein; n=2; Bombyx mori|Rep... 74 2e-12
UniRef50_Q7Q0A4 Cluster: ENSANGP00000020083; n=1; Anopheles gamb... 44 0.002
UniRef50_UPI00015B43A7 Cluster: PREDICTED: similar to ENSANGP000... 43 0.004
UniRef50_Q17DQ0 Cluster: Niemann-Pick Type C-2, putative; n=1; A... 39 0.078
UniRef50_Q8IGP0 Cluster: RE56164p; n=5; Sophophora|Rep: RE56164p... 38 0.10
UniRef50_UPI0000DB7A3F Cluster: PREDICTED: hypothetical protein;... 37 0.24
UniRef50_A7AQ80 Cluster: Putative uncharacterized protein; n=1; ... 37 0.31
UniRef50_P61916 Cluster: Epididymal secretory protein E1 precurs... 36 0.41
UniRef50_A7B8S4 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_Q4PHF7 Cluster: Putative uncharacterized protein; n=1; ... 33 3.9
UniRef50_Q2SUX5 Cluster: GH09231p; n=1; Burkholderia thailandens... 33 5.1
UniRef50_A1W2G4 Cluster: O-antigen polymerase; n=2; Acidovorax|R... 32 6.8
UniRef50_Q5VPU1 Cluster: HGWP repeat containing protein-like; n=... 32 6.8
UniRef50_Q7QRS1 Cluster: GLP_260_9179_15133; n=1; Giardia lambli... 32 6.8
UniRef50_Q55GM7 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_A0D115 Cluster: Chromosome undetermined scaffold_33, wh... 32 6.8
UniRef50_A1ZZ38 Cluster: Lipoprotein, putative; n=1; Microscilla... 32 8.9
>UniRef50_Q69FX2 Cluster: Promoting protein; n=2; Bombyx mori|Rep:
Promoting protein - Bombyx mori (Silk moth)
Length = 154
Score = 73.7 bits (173), Expect = 2e-12
Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = -1
Query: 429 VFKKKCRDVDTSLCTVHNVMVEPCGEGPIFCALKKNKPYSISLDVTPHFSANKLHAVIKG 250
V + CR+VD S CTV+ V ++PC + C LKK K +S D TP FS KL + G
Sbjct: 23 VTTRLCREVDASACTVNEVRIDPCVNSRL-CHLKKGKNAKVSFDFTPQFSTTKLKTGLFG 81
Query: 249 DVQNQNTFSTTFTRSAEYNDLLDNTLSEGKRTHIQLQLAVDKR-ASGKFPLEVRVWDEDD 73
++N +A+ L GK + L + K+ +G F + ++W+ED+
Sbjct: 82 -LKNGAEIPFDALYNADACTLTSCPTEAGKTQTLDFSLHIGKKLPTGNFEFKWKLWNEDN 140
Query: 72 TSHVCC 55
S +CC
Sbjct: 141 ESQMCC 146
>UniRef50_Q7Q0A4 Cluster: ENSANGP00000020083; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000020083 - Anopheles gambiae
str. PEST
Length = 161
Score = 44.4 bits (100), Expect = 0.002
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = -1
Query: 435 EFVFKKKCRDVDTSLCTVHNVMVEPCGEGP--IFCALKKNKPYSISLDVTPHFSANKLHA 262
E V KKC + CT+H V + PC E + C + + SIS D TP F+AN+L A
Sbjct: 23 EVVNFKKCPG-EGRKCTIHEVSISPCPEAAEGVACTVYRGTNVSISFDFTPEFAANELTA 81
>UniRef50_UPI00015B43A7 Cluster: PREDICTED: similar to
ENSANGP00000020083, partial; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to
ENSANGP00000020083, partial - Nasonia vitripennis
Length = 128
Score = 43.2 bits (97), Expect = 0.004
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 4/120 (3%)
Frame = -1
Query: 393 LCTVHNVMVEPCGEGPI--FCALKKNKPYSISLDVTPHFSANKLHAVIKGDVQNQNT-FS 223
+CT+H V V PC E C LKK + IS D TP F A+K+ + + NQ
Sbjct: 5 VCTIHEVRVLPCKEAVQGKACNLKKGEDAKISFDFTPKFDASKVES--RAYWPNQLVDLP 62
Query: 222 TTFTRSAEYNDLLDNTLSEGKRTHIQLQLAVDKR-ASGKFPLEVRVWDEDDTSHVCCSIF 46
S + L+ + + L + K+ + F ++ ++W+ + +CC +F
Sbjct: 63 LMGMESDACKEGTTCPLARDTKYTYNINLPISKKFPTRPFDVKWKLWNTEKEDELCCFLF 122
>UniRef50_Q17DQ0 Cluster: Niemann-Pick Type C-2, putative; n=1;
Aedes aegypti|Rep: Niemann-Pick Type C-2, putative -
Aedes aegypti (Yellowfever mosquito)
Length = 157
Score = 38.7 bits (86), Expect = 0.078
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = -1
Query: 471 LILISNYAFVQGEFVFKKKCRDVDTSLCTVHNVMVEPCGEGPIF--CALKKNKPYSISLD 298
L+LI + E + +KC + + CTVH V V+PC E C + + +I+ D
Sbjct: 8 LLLIGAVTIARAEVIPFEKCNE--SVKCTVHEVRVDPCPESAQNKPCVMVRGTNATIAFD 65
Query: 297 VTPHFSA 277
TP FS+
Sbjct: 66 YTPDFSS 72
>UniRef50_Q8IGP0 Cluster: RE56164p; n=5; Sophophora|Rep: RE56164p -
Drosophila melanogaster (Fruit fly)
Length = 168
Score = 38.3 bits (85), Expect = 0.10
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Frame = -1
Query: 471 LILISNYAFVQGEFVFKKKCRD-VDTSLCTVHNVMVEPCGE--GPIFCALKKNKPYSISL 301
++LIS+ A E V + C D VDT CT+ V V PC E C +++ +S
Sbjct: 23 IVLISSSA--SAEVVNFEPCPDSVDT--CTIQQVRVSPCPEALNNAACNIRRKHNSEMSF 78
Query: 300 DVTPHFSANKLHAVIKGDVQNQN 232
D TP+F A+ L A + G +++N
Sbjct: 79 DFTPNFDADTLVASL-GWAKSEN 100
>UniRef50_UPI0000DB7A3F Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 159
Score = 37.1 bits (82), Expect = 0.24
Identities = 33/153 (21%), Positives = 68/153 (44%), Gaps = 5/153 (3%)
Frame = -1
Query: 489 MYAVFCLILISNYAFVQGEFVFKKKCRDVDTSL---CTVHNVMVEPCGE--GPIFCALKK 325
++A F +L + YA E V ++C D ++ CT+H V ++PC E C +K+
Sbjct: 8 LFAFFLFVLSTVYA----ELVPWRQCPYPDPNIQTNCTIHEVYIDPCKEITEGKPCKIKR 63
Query: 324 NKPYSISLDVTPHFSANKLHAVIKGDVQNQNTFSTTFTRSAEYNDLLDNTLSEGKRTHIQ 145
+++ TP FS++K+ I Q + A + H++
Sbjct: 64 GVIGNMTFHYTPAFSSDKVQGRIFWASQVMDIPFLGMNPDACLSTSCPIEAGSRNTYHVE 123
Query: 144 LQLAVDKRASGKFPLEVRVWDEDDTSHVCCSIF 46
+ + + K + L+ ++W++++ CC +F
Sbjct: 124 IPI-LKKYPVRTYDLKWKIWNDEEQE--CCFMF 153
>UniRef50_A7AQ80 Cluster: Putative uncharacterized protein; n=1;
Babesia bovis|Rep: Putative uncharacterized protein -
Babesia bovis
Length = 525
Score = 36.7 bits (81), Expect = 0.31
Identities = 34/130 (26%), Positives = 57/130 (43%), Gaps = 4/130 (3%)
Frame = -1
Query: 486 YAVFCLILISNYAFVQGEFVFKKKCRDVDTSLCTVHNVMVEP-CGEGPIFCALKKNKPYS 310
Y+ C L+S++ +F+ K + DVD L T+ P C G + C + + S
Sbjct: 145 YSGCCTCLVSHFK----DFLIKNE-DDVDNILYTLSEHKPCPFCKRGLVSCFIHNRQMAS 199
Query: 309 ISLDVT-PHFSANKLHAVIKGDVQNQNTFSTTFTRSAEYNDLL--DNTLSEGKRTHIQLQ 139
+ L++ F L+ G N+ ++T + LL DNTL E R H+ L
Sbjct: 200 VLLELDYSKFDIPSLNTATSGSETNEAGSASTVAMVIPKHFLLCVDNTLLEAMREHMLLP 259
Query: 138 LAVDKRASGK 109
+ +D + K
Sbjct: 260 IHIDSLLAPK 269
>UniRef50_P61916 Cluster: Epididymal secretory protein E1 precursor;
n=32; Euteleostomi|Rep: Epididymal secretory protein E1
precursor - Homo sapiens (Human)
Length = 151
Score = 36.3 bits (80), Expect = 0.41
Identities = 26/78 (33%), Positives = 36/78 (46%)
Frame = -1
Query: 483 AVFCLILISNYAFVQGEFVFKKKCRDVDTSLCTVHNVMVEPCGEGPIFCALKKNKPYSIS 304
A F L+ +S A Q E V K C VD + V V PC P C L K + YS++
Sbjct: 6 ATFLLLALSTAA--QAEPVQFKDCGSVDG---VIKEVNVSPCPTQP--CQLSKGQSYSVN 58
Query: 303 LDVTPHFSANKLHAVIKG 250
+ T + + AV+ G
Sbjct: 59 VTFTSNIQSKSSKAVVHG 76
>UniRef50_A7B8S4 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 275
Score = 33.1 bits (72), Expect = 3.9
Identities = 14/53 (26%), Positives = 30/53 (56%)
Frame = -1
Query: 207 SAEYNDLLDNTLSEGKRTHIQLQLAVDKRASGKFPLEVRVWDEDDTSHVCCSI 49
+ Y D L+ T S G+ H+++ + ++ + KFP RV+D + ++ C ++
Sbjct: 196 AGRYQDFLERT-SSGRVLHLEMGVGMNTPSIIKFPFWRRVFDNPEATYACVAL 247
>UniRef50_Q4PHF7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 828
Score = 33.1 bits (72), Expect = 3.9
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 252 GDVQNQNTFSTTFTRSAEYNDLLDNTLSEGKRTHIQL 142
G+ + + +F + +A Y D+LD GKRTH+ L
Sbjct: 704 GEEEKKGSFVSAMLLTAVYTDVLDTVSDRGKRTHVTL 740
>UniRef50_Q2SUX5 Cluster: GH09231p; n=1; Burkholderia thailandensis
E264|Rep: GH09231p - Burkholderia thailandensis (strain
E264 / ATCC 700388 / DSM 13276 /CIP 106301)
Length = 187
Score = 32.7 bits (71), Expect = 5.1
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +3
Query: 78 PRPKRELPMGICQRRVCPQPTGVVCVFASLPIKYCPVGHC 197
P P+ P G C CP T C F + P CP G C
Sbjct: 103 PCPRTSCPFGTCPFGTCPFGT---CPFGTCPFGTCPFGTC 139
>UniRef50_A1W2G4 Cluster: O-antigen polymerase; n=2; Acidovorax|Rep:
O-antigen polymerase - Acidovorax sp. (strain JS42)
Length = 435
Score = 32.3 bits (70), Expect = 6.8
Identities = 18/58 (31%), Positives = 29/58 (50%)
Frame = +1
Query: 196 VLC*SREGSRESVLVLDVSLYDCVQFIRRKVWSNV*AYAVRLILLESAEDRAFATRFN 369
VL SR G ++ V LY F RR++W + + L++L +A + A R+N
Sbjct: 197 VLSQSRGGWLALLMATPVGLYFLWHFYRRELWRMLAGTTIALVVLGAANHKVLAERWN 254
>UniRef50_Q5VPU1 Cluster: HGWP repeat containing protein-like; n=3;
Oryza sativa (japonica cultivar-group)|Rep: HGWP repeat
containing protein-like - Oryza sativa subsp. japonica
(Rice)
Length = 1200
Score = 32.3 bits (70), Expect = 6.8
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 63 HETYHPRPKRELPMGICQRRVCPQPT 140
H T H RP+ P G+ +RRV P PT
Sbjct: 692 HTTIHGRPRLRRPAGLRRRRVVPPPT 717
>UniRef50_Q7QRS1 Cluster: GLP_260_9179_15133; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_260_9179_15133 - Giardia lamblia
ATCC 50803
Length = 1984
Score = 32.3 bits (70), Expect = 6.8
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = +2
Query: 113 PEARLSTANWSCMCVRFPS--DKVLSSRS--LYSADLVKVVEKVFWFWTSPFMTACNLFA 280
PE A +SCM RF K+ SS+S L +A++VK++ K+F+ T+ M + F
Sbjct: 5 PETSSPAAKFSCMQNRFFGFKKKLSSSQSTELITANMVKIIAKIFFQTTNKVMRFSDQFL 64
Query: 281 EKCGVTSKLML*GLF 325
+ V S+L L LF
Sbjct: 65 AR--VASQLDLKLLF 77
>UniRef50_Q55GM7 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1807
Score = 32.3 bits (70), Expect = 6.8
Identities = 18/60 (30%), Positives = 25/60 (41%)
Frame = -1
Query: 510 YNSSDGNMYAVFCLILISNYAFVQGEFVFKKKCRDVDTSLCTVHNVMVEPCGEGPIFCAL 331
++ S MY ++ I S + VFK C D CT N +V C +FC L
Sbjct: 989 FDESSSTMYCIYTSINESTCSTDYSNTVFKN-CGDFSYDQCTYCNDLVNGCNSFGLFCGL 1047
>UniRef50_A0D115 Cluster: Chromosome undetermined scaffold_33, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_33,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 391
Score = 32.3 bits (70), Expect = 6.8
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +1
Query: 229 SVLVLDVSLYDCVQFIRRKVWSNV*AYAVRL-ILLESAEDRAFATRFNHHVMNGTQ*SVH 405
S+L+ L V FI RK N ++ ++ + LES + + NH++ N T +
Sbjct: 142 SILIFSQCLLSAVLFIYRKS-QNQTSFGTQIQVPLESQKHFINEIQSNHNIQNKTNDTAE 200
Query: 406 ISTFFLEYKLA 438
TFFL+ K A
Sbjct: 201 FKTFFLQSKNA 211
>UniRef50_A1ZZ38 Cluster: Lipoprotein, putative; n=1; Microscilla
marina ATCC 23134|Rep: Lipoprotein, putative -
Microscilla marina ATCC 23134
Length = 291
Score = 31.9 bits (69), Expect = 8.9
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = -2
Query: 251 ETSKTKTLSRLPSRDQQSTMTYWTILYRKGSEHTYN---SSWLWTNAP 117
+T+ T+ + S D Q + Y+ ++ G +N SSW WT AP
Sbjct: 152 DTTNRVTIISIQSEDLQKSNAYYMWYWKSGQSSQFNTVDSSWNWTYAP 199
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 524,371,129
Number of Sequences: 1657284
Number of extensions: 10794600
Number of successful extensions: 28194
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 27439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28185
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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