Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12e16
(516 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X67698-1|CAA47928.1| 151|Homo sapiens protein ( H.sapiens tissu... 36 0.064
BC002532-1|AAH02532.1| 151|Homo sapiens Niemann-Pick disease, t... 36 0.064
AK222474-1|BAD96194.1| 151|Homo sapiens Niemann-Pick disease, t... 35 0.19
BC044642-1|AAH44642.1| 506|Homo sapiens RC3H2 protein protein. 30 4.2
M63310-1|AAA52284.1| 323|Homo sapiens 1,2-cyclic-inositol-phosp... 29 9.7
M20560-1|AAA59496.1| 323|Homo sapiens ANX3 protein. 29 9.7
L20591-1|AAA16713.1| 323|Homo sapiens annexin III protein. 29 9.7
CR407648-1|CAG28576.1| 323|Homo sapiens ANXA3 protein. 29 9.7
BC000871-1|AAH00871.1| 323|Homo sapiens annexin A3 protein. 29 9.7
AY358680-1|AAQ89043.1| 83|Homo sapiens AWQG2491 protein. 29 9.7
>X67698-1|CAA47928.1| 151|Homo sapiens protein ( H.sapiens tissue
specific mRNA. ).
Length = 151
Score = 36.3 bits (80), Expect = 0.064
Identities = 26/78 (33%), Positives = 36/78 (46%)
Frame = -1
Query: 483 AVFCLILISNYAFVQGEFVFKKKCRDVDTSLCTVHNVMVEPCGEGPIFCALKKNKPYSIS 304
A F L+ +S A Q E V K C VD + V V PC P C L K + YS++
Sbjct: 6 ATFLLLALSTAA--QAEPVQFKDCGSVDG---VIKEVNVSPCPTQP--CQLSKGQSYSVN 58
Query: 303 LDVTPHFSANKLHAVIKG 250
+ T + + AV+ G
Sbjct: 59 VTFTSNIQSKSSKAVVHG 76
>BC002532-1|AAH02532.1| 151|Homo sapiens Niemann-Pick disease, type
C2 protein.
Length = 151
Score = 36.3 bits (80), Expect = 0.064
Identities = 26/78 (33%), Positives = 36/78 (46%)
Frame = -1
Query: 483 AVFCLILISNYAFVQGEFVFKKKCRDVDTSLCTVHNVMVEPCGEGPIFCALKKNKPYSIS 304
A F L+ +S A Q E V K C VD + V V PC P C L K + YS++
Sbjct: 6 ATFLLLALSTAA--QAEPVQFKDCGSVDG---VIKEVNVSPCPTQP--CQLSKGQSYSVN 58
Query: 303 LDVTPHFSANKLHAVIKG 250
+ T + + AV+ G
Sbjct: 59 VTFTSNIQSKSSKAVVHG 76
>AK222474-1|BAD96194.1| 151|Homo sapiens Niemann-Pick disease, type
C2 precursor variant protein.
Length = 151
Score = 34.7 bits (76), Expect = 0.19
Identities = 25/78 (32%), Positives = 36/78 (46%)
Frame = -1
Query: 483 AVFCLILISNYAFVQGEFVFKKKCRDVDTSLCTVHNVMVEPCGEGPIFCALKKNKPYSIS 304
A F L+ +S A Q E V + C VD + V V PC P C L K + YS++
Sbjct: 6 ATFLLLALSTAA--QAEPVQFRDCGSVDG---VIKEVNVSPCPTQP--CQLSKGQSYSVN 58
Query: 303 LDVTPHFSANKLHAVIKG 250
+ T + + AV+ G
Sbjct: 59 VTFTSNVQSKSSKAVVHG 76
>BC044642-1|AAH44642.1| 506|Homo sapiens RC3H2 protein protein.
Length = 506
Score = 30.3 bits (65), Expect = 4.2
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Frame = +3
Query: 18 LHNLSDFNR*ILSNKHETYHPRPKRELPMGIC----QRRVCPQPTGVVCVFASLPIKYC- 182
+H L DF + HET P+P + +C Q+ CP+ T + ++ C
Sbjct: 385 VHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLRQQGGCPRGTNCTFAHSQEELEKCN 444
Query: 183 PVG---HCTLLIS 212
P G HC LL S
Sbjct: 445 PRGLYLHCCLLSS 457
>M63310-1|AAA52284.1| 323|Homo sapiens
1,2-cyclic-inositol-phosphate phosphodiesterase protein.
Length = 323
Score = 29.1 bits (62), Expect = 9.7
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = -1
Query: 294 TPHFSANKLHAVIKGDVQNQNTFSTTFTRSAEYNDLLDNTLSEGKRTHIQLQLAVDKRAS 115
TP F A +LH +KG ++ T + +E DLLD K L A+ S
Sbjct: 250 TPAFLAERLHRALKGIGTDEFTLNRIMVSRSEI-DLLDIRTEFKKHYGYSLYSAIKSDTS 308
Query: 114 GKFPLE-VRVWDEDD 73
G + + +++ DD
Sbjct: 309 GDYEITLLKICGGDD 323
>M20560-1|AAA59496.1| 323|Homo sapiens ANX3 protein.
Length = 323
Score = 29.1 bits (62), Expect = 9.7
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = -1
Query: 294 TPHFSANKLHAVIKGDVQNQNTFSTTFTRSAEYNDLLDNTLSEGKRTHIQLQLAVDKRAS 115
TP F A +LH +KG ++ T + +E DLLD K L A+ S
Sbjct: 250 TPAFLAERLHRALKGIGTDEFTLNRIMVSRSEI-DLLDIRTEFKKHYGYSLYSAIKSDTS 308
Query: 114 GKFPLE-VRVWDEDD 73
G + + +++ DD
Sbjct: 309 GDYEITLLKICGGDD 323
>L20591-1|AAA16713.1| 323|Homo sapiens annexin III protein.
Length = 323
Score = 29.1 bits (62), Expect = 9.7
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = -1
Query: 294 TPHFSANKLHAVIKGDVQNQNTFSTTFTRSAEYNDLLDNTLSEGKRTHIQLQLAVDKRAS 115
TP F A +LH +KG ++ T + +E DLLD K L A+ S
Sbjct: 250 TPAFLAERLHRALKGIGTDEFTLNRIMVSRSEI-DLLDIRTEFKKHYGYSLYSAIKSDTS 308
Query: 114 GKFPLE-VRVWDEDD 73
G + + +++ DD
Sbjct: 309 GDYEITLLKICGGDD 323
>CR407648-1|CAG28576.1| 323|Homo sapiens ANXA3 protein.
Length = 323
Score = 29.1 bits (62), Expect = 9.7
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = -1
Query: 294 TPHFSANKLHAVIKGDVQNQNTFSTTFTRSAEYNDLLDNTLSEGKRTHIQLQLAVDKRAS 115
TP F A +LH +KG ++ T + +E DLLD K L A+ S
Sbjct: 250 TPAFLAERLHRALKGIGTDEFTLNRIMVSRSEI-DLLDIRTEFKKHYGYSLYSAIKSDTS 308
Query: 114 GKFPLE-VRVWDEDD 73
G + + +++ DD
Sbjct: 309 GDYEITLLKICGGDD 323
>BC000871-1|AAH00871.1| 323|Homo sapiens annexin A3 protein.
Length = 323
Score = 29.1 bits (62), Expect = 9.7
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = -1
Query: 294 TPHFSANKLHAVIKGDVQNQNTFSTTFTRSAEYNDLLDNTLSEGKRTHIQLQLAVDKRAS 115
TP F A +LH +KG ++ T + +E DLLD K L A+ S
Sbjct: 250 TPAFLAERLHRALKGIGTDEFTLNRIMVSRSEI-DLLDIRTEFKKHYGYSLYSAIKSDTS 308
Query: 114 GKFPLE-VRVWDEDD 73
G + + +++ DD
Sbjct: 309 GDYEITLLKICGGDD 323
>AY358680-1|AAQ89043.1| 83|Homo sapiens AWQG2491 protein.
Length = 83
Score = 29.1 bits (62), Expect = 9.7
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 84 PKRELPMGICQRRVCPQPTGVVCVFASLPIKYCPVGHCTLLI 209
P+R P G ++ +CP P G +C + L + + + HC LL+
Sbjct: 37 PQRPPPPG--RQPLCPSPPGYLCTLSMLLLWH--LSHCILLV 74
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,727,524
Number of Sequences: 237096
Number of extensions: 1645834
Number of successful extensions: 3354
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3354
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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