Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12e15
(266 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodops... 21 3.5
AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength rhodo... 21 3.5
AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength rhodo... 21 3.5
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 20 6.1
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 20 6.1
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 20 6.1
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 20 6.1
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 20 6.1
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 20 6.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 20 6.1
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 20 6.1
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 20 6.1
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 20 6.1
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 20 6.1
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 20 6.1
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 20 6.1
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 20 6.1
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 20 6.1
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 20 6.1
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 20 6.1
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 20 6.1
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 20 6.1
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 20 6.1
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 20 6.1
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 19 8.0
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 19 8.0
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 19 8.0
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 19 8.0
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 19 8.0
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 19 8.0
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 19 8.0
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 19 8.0
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 19 8.0
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 19 8.0
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 19 8.0
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 19 8.0
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 19 8.0
>U26026-1|AAA69069.1| 377|Apis mellifera long-wavelength rhodopsin
protein.
Length = 377
Score = 20.6 bits (41), Expect = 3.5
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = +1
Query: 19 LSGIASKPFTS*GLPVSLISLW 84
+ G++ KP + G + +I++W
Sbjct: 155 VKGLSGKPLSINGALIRIIAIW 176
>AY703752-1|AAU12748.1| 152|Apis mellifera long-wavelength
rhodopsin protein.
Length = 152
Score = 20.6 bits (41), Expect = 3.5
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = +1
Query: 19 LSGIASKPFTS*GLPVSLISLW 84
+ G++ KP + G + +I++W
Sbjct: 121 VKGLSGKPLSINGALIRIIAIW 142
>AF091732-1|AAD02869.2| 154|Apis mellifera long-wavelength
rhodopsin protein.
Length = 154
Score = 20.6 bits (41), Expect = 3.5
Identities = 6/22 (27%), Positives = 14/22 (63%)
Frame = +1
Query: 19 LSGIASKPFTS*GLPVSLISLW 84
+ G++ KP + G + +I++W
Sbjct: 31 VKGLSGKPLSINGALIRIIAIW 52
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
Score = 19.4 bits (38), Expect = 8.0
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +3
Query: 180 NSSSYNEKTRKNFVPHYSKFSY 245
N S+YN N +Y K Y
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYY 111
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
Score = 19.4 bits (38), Expect = 8.0
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +3
Query: 180 NSSSYNEKTRKNFVPHYSKFSY 245
N S+YN N +Y K Y
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYY 111
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
Score = 19.4 bits (38), Expect = 8.0
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +3
Query: 180 NSSSYNEKTRKNFVPHYSKFSY 245
N S+YN N +Y K Y
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYY 111
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
Score = 19.4 bits (38), Expect = 8.0
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +3
Query: 180 NSSSYNEKTRKNFVPHYSKFSY 245
N S+YN N +Y K Y
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYY 111
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
Score = 19.4 bits (38), Expect = 8.0
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +3
Query: 180 NSSSYNEKTRKNFVPHYSKFSY 245
N S+YN N +Y K Y
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYY 111
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
Score = 19.4 bits (38), Expect = 8.0
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +3
Query: 180 NSSSYNEKTRKNFVPHYSKFSY 245
N S+YN N +Y K Y
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYY 111
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
Score = 19.4 bits (38), Expect = 8.0
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +3
Query: 180 NSSSYNEKTRKNFVPHYSKFSY 245
N S+YN N +Y K Y
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYY 111
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
Score = 19.4 bits (38), Expect = 8.0
Identities = 8/22 (36%), Positives = 10/22 (45%)
Frame = +3
Query: 180 NSSSYNEKTRKNFVPHYSKFSY 245
N S+YN N +Y K Y
Sbjct: 90 NYSNYNNYNNNNNYNNYKKLYY 111
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRKRYSRSREREQNSYK 51
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 19.8 bits (39), Expect = 6.1
Identities = 4/5 (80%), Positives = 5/5 (100%)
Frame = -3
Query: 192 NCCCW 178
+CCCW
Sbjct: 10 SCCCW 14
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 244 LHNEKEKLLEERTSRKRYSRSREREQNSYK 273
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 244 LHNEKEKLLEERTSRKRYSRSREREQNSYK 273
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 255 LHNEKEKLLEERTSRKRYSRSREREQNSYK 284
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 19.8 bits (39), Expect = 6.1
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 255 LHNEKEKLLEERTSRKRYSRSREREQNSYK 284
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 19.8 bits (39), Expect = 6.1
Identities = 5/14 (35%), Positives = 11/14 (78%)
Frame = +1
Query: 82 WYNARLHLSVSERL 123
W++ H+SV+++L
Sbjct: 156 WHSPEAHISVAQKL 169
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 8.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRNRYSRSREREQNSYK 51
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 8.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRNRYSRSREREQNSYK 51
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 8.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRNRYSRSREREQNSYK 51
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 8.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRNRYSRSREREQNSYK 51
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 8.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRNRYSRSREREQNSYK 51
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 8.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRNRYSRSREREQNSYK 51
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 19.4 bits (38), Expect = 8.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LHNEKEKLLEERTSRNRYSRSREREQNSYK 51
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.4 bits (38), Expect = 8.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LCNEEEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.4 bits (38), Expect = 8.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LCNEEEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.4 bits (38), Expect = 8.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LCNEEEKLLEERTSRKRYSRSREREQNSYK 51
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 19.4 bits (38), Expect = 8.0
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = -1
Query: 137 LGNHYRRSLTDRWSRALYQRDMRLTGNPYE 48
L N + L +R SR Y R N Y+
Sbjct: 22 LCNEEEKLLEERTSRKRYSRSREREQNSYK 51
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 19.4 bits (38), Expect = 8.0
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -1
Query: 131 NHYRRSLTDRWS 96
+HYRR+ DR++
Sbjct: 133 SHYRRTRRDRYT 144
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 19.4 bits (38), Expect = 8.0
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = +3
Query: 228 YSKFSYPKL 254
Y KFSYP++
Sbjct: 106 YLKFSYPRM 114
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,824
Number of Sequences: 438
Number of extensions: 1516
Number of successful extensions: 46
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 5012760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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