Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12e14
         (762 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL512593-1|CAI14941.1| 1411|Homo sapiens zinc finger protein 462...    31   4.5  
AK027866-1|BAB55417.1| 1181|Homo sapiens protein ( Homo sapiens ...    31   4.5  
AB058706-1|BAB47432.2| 1412|Homo sapiens KIAA1803 protein protein.     31   4.5  

>AL512593-1|CAI14941.1| 1411|Homo sapiens zinc finger protein 462
           protein.
          Length = 1411

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -3

Query: 718 RIQPKKAAQIRAANPKARALDKYECLQCLKRHKDVREYLNHMRIAH 581
           R+ P+K+ Q+ +ANP A +   Y+C  C   + ++   L H    H
Sbjct: 294 RLSPEKSLQLASANP-AISSTPYQCTVCQSEYNNLHGLLTHYGKKH 338


>AK027866-1|BAB55417.1| 1181|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14960 fis, clone PLACE4000192, weakly similar to
           ZINC FINGER PROTEIN 142. ).
          Length = 1181

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -3

Query: 718 RIQPKKAAQIRAANPKARALDKYECLQCLKRHKDVREYLNHMRIAH 581
           R+ P+K+ Q+ +ANP A +   Y+C  C   + ++   L H    H
Sbjct: 294 RLSPEKSLQLASANP-AISSTPYQCTVCQSEYNNLHGLLTHYGKKH 338


>AB058706-1|BAB47432.2| 1412|Homo sapiens KIAA1803 protein protein.
          Length = 1412

 Score = 31.1 bits (67), Expect = 4.5
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = -3

Query: 718 RIQPKKAAQIRAANPKARALDKYECLQCLKRHKDVREYLNHMRIAH 581
           R+ P+K+ Q+ +ANP A +   Y+C  C   + ++   L H    H
Sbjct: 294 RLSPEKSLQLASANP-AISSTPYQCTVCQSEYNNLHGLLTHYGKKH 338


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,269,190
Number of Sequences: 237096
Number of extensions: 2171127
Number of successful extensions: 5992
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5988
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9144232952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)