Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12e13
         (712 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070255-1|AAL59654.1|  230|Anopheles gambiae glutathione S-tran...    25   2.3  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    24   4.1  
DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific doub...    24   4.1  
AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     24   4.1  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    24   5.4  
AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding pr...    23   9.5  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    23   9.5  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    23   9.5  

>AY070255-1|AAL59654.1|  230|Anopheles gambiae glutathione
           S-transferase E5 protein.
          Length = 230

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -3

Query: 266 VSHAVYEKDGVKHMRMRFYIKGIRNKGVVELDMKQNDY 153
           V+  ++   GV   R+RFY + I  +G  E+   + DY
Sbjct: 100 VNAGLHFDSGVLFSRLRFYFEPILYEGSAEVPQDKIDY 137


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
 Frame = -3

Query: 695 LSTL*EIFDDEI--TIRSTTEKIPAILQTKFRTNTRYFSSEKESGLTK-SKSKESASHVS 525
           ++ L E+   EI  TI S+   + + +++         + +    L K S S+ S +H S
Sbjct: 103 IAALLELVKAEILTTIDSSLSSLRSAIKSDLLAEILALADKLTPVLAKPSVSQPSRTHTS 162

Query: 524 TDVRPLGEKIKETTKTVS 471
           T+   L      TTKT S
Sbjct: 163 TNASSLNATNTRTTKTAS 180


>DQ137801-1|AAZ78362.1|  622|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 622

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 149 FHNHFVSYQVQQHLYFLSL*YR 214
           FH HF+ YQ Q  L  +   YR
Sbjct: 544 FHTHFLGYQPQMQLPHVEPFYR 565


>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -3

Query: 140 CRYLLVQLDDYSGKTFI 90
           CRY +  +DD+S  TF+
Sbjct: 358 CRYYMTLIDDHSRYTFV 374


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 161 NDYGNYMCRYLLVQLDDYSGK 99
           N  GNYMCR       D++GK
Sbjct: 545 NSSGNYMCRSNPPAQSDHNGK 565


>AY146717-1|AAO12077.1|  188|Anopheles gambiae odorant-binding
           protein AgamOBP14 protein.
          Length = 188

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -3

Query: 425 FFYVFRELFSSNSPNSIYSEALEKCKQDP 339
           F   FR+   SN  + I + A+EK +Q+P
Sbjct: 151 FLDEFRKYVDSNMNSLIAAVAVEKAEQNP 179


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = +3

Query: 165 FHIKFNNTFISYPFNIESHSHMFH---SIFFIYCMTDMG 272
           FH + +  ++  P  +E   H+FH   S  F +C   MG
Sbjct: 209 FHFQSHKEWVPQPQWLEEDQHVFHVVKSRNFDHCEQRMG 247


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.0 bits (47), Expect = 9.5
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 3/39 (7%)
 Frame = +3

Query: 165 FHIKFNNTFISYPFNIESHSHMFH---SIFFIYCMTDMG 272
           FH + +  ++  P  +E   H+FH   S  F +C   MG
Sbjct: 209 FHFQSHKEWVPQPQWLEEDQHVFHVVKSRNFDHCEQRMG 247


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 604,956
Number of Sequences: 2352
Number of extensions: 11581
Number of successful extensions: 28
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72758970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)