Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12e13
(712 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY060901-1|AAL28449.1| 236|Drosophila melanogaster GM05057p pro... 182 3e-46
AE014134-922|AAF52252.1| 236|Drosophila melanogaster CG7382-PA ... 182 3e-46
BT015297-1|AAT94526.1| 662|Drosophila melanogaster AT30160p pro... 30 2.7
BT006027-1|AAO85561.1| 419|Drosophila melanogaster LD10519p pro... 30 2.7
AF106932-1|AAD09425.1| 1945|Drosophila melanogaster plexin A pro... 30 2.7
AE014296-1095|AAF50676.1| 662|Drosophila melanogaster CG7386-PA... 30 2.7
AE014135-166|ABC65831.1| 419|Drosophila melanogaster CG11081-PE... 30 2.7
AE014135-163|AAN06565.2| 1945|Drosophila melanogaster CG11081-PD... 30 2.7
AE014135-162|AAF59394.1| 1945|Drosophila melanogaster CG11081-PA... 30 2.7
AY070987-1|AAL48609.1| 252|Drosophila melanogaster RE08075p pro... 30 3.6
AE014297-3562|AAF56308.2| 252|Drosophila melanogaster CG13618-P... 30 3.6
AE014297-4072|AAF56669.1| 463|Drosophila melanogaster CG6066-PA... 29 4.7
M20705-1|AAA70215.1| 112|Drosophila melanogaster unknown protei... 29 8.2
>AY060901-1|AAL28449.1| 236|Drosophila melanogaster GM05057p
protein.
Length = 236
Score = 182 bits (444), Expect = 3e-46
Identities = 85/171 (49%), Positives = 119/171 (69%)
Frame = -3
Query: 584 SEKESGLTKSKSKESASHVSTDVRPLGEKIKETTKTVSYXXXXXXXXXXXXXIFFYVFRE 405
+ ++ G + +S+++ + VSTDVRP+GEKIKE TKT SY +FF +FRE
Sbjct: 41 ASRDGGGSLQRSQDN-TQVSTDVRPIGEKIKENTKTASYTAIIIAGLGVTCVMFFAIFRE 99
Query: 404 LFSSNSPNSIYSEALEKCKQDPRVEDALGAPIKGYGEEXXXXXXTHVSHAVYEKDGVKHM 225
LFSS SPN+IY++AL + +DPRV+DA+GAPIKG+GE HV+H+ YE++G HM
Sbjct: 100 LFSSESPNNIYADALRRVVEDPRVQDAIGAPIKGFGETSRRGRRQHVAHSSYERNGKPHM 159
Query: 224 RMRFYIKGIRNKGVVELDMKQNDYGNYMCRYLLVQLDDYSGKTFIIEDNRA 72
RM+FY++G+RNK V+L+ +++D G RYL VQLD Y T I+EDNRA
Sbjct: 160 RMQFYVQGLRNKATVQLESRRSDSGKLEYRYLFVQLDHYPRTTIILEDNRA 210
>AE014134-922|AAF52252.1| 236|Drosophila melanogaster CG7382-PA
protein.
Length = 236
Score = 182 bits (444), Expect = 3e-46
Identities = 85/171 (49%), Positives = 119/171 (69%)
Frame = -3
Query: 584 SEKESGLTKSKSKESASHVSTDVRPLGEKIKETTKTVSYXXXXXXXXXXXXXIFFYVFRE 405
+ ++ G + +S+++ + VSTDVRP+GEKIKE TKT SY +FF +FRE
Sbjct: 41 ASRDGGGSLQRSQDN-TQVSTDVRPIGEKIKENTKTASYTAIIIAGLGVTCVMFFAIFRE 99
Query: 404 LFSSNSPNSIYSEALEKCKQDPRVEDALGAPIKGYGEEXXXXXXTHVSHAVYEKDGVKHM 225
LFSS SPN+IY++AL + +DPRV+DA+GAPIKG+GE HV+H+ YE++G HM
Sbjct: 100 LFSSESPNNIYADALRRVVEDPRVQDAIGAPIKGFGETSRRGRRQHVAHSSYERNGKPHM 159
Query: 224 RMRFYIKGIRNKGVVELDMKQNDYGNYMCRYLLVQLDDYSGKTFIIEDNRA 72
RM+FY++G+RNK V+L+ +++D G RYL VQLD Y T I+EDNRA
Sbjct: 160 RMQFYVQGLRNKATVQLESRRSDSGKLEYRYLFVQLDHYPRTTIILEDNRA 210
>BT015297-1|AAT94526.1| 662|Drosophila melanogaster AT30160p
protein.
Length = 662
Score = 30.3 bits (65), Expect = 2.7
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -3
Query: 680 EIFDDEITIRSTTEKIPAILQTKFRTNTR-YFSSEKESGLTKSKSKESASHVSTDVRPLG 504
E+ D+E + EK+ L+ R + +FSS + +GL + K KES S D + +G
Sbjct: 122 EMIDNEEDVFKLLEKVDKELEEHSRDQSEEHFSSAEHNGLEEEK-KESEGFNSDDEQAMG 180
Query: 503 EK 498
++
Sbjct: 181 QR 182
>BT006027-1|AAO85561.1| 419|Drosophila melanogaster LD10519p
protein.
Length = 419
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 531 CIYRCKTLRRKNQRNYKNCF 472
CIY K++RRK +N K+CF
Sbjct: 371 CIYSLKSIRRKFMQNIKSCF 390
>AF106932-1|AAD09425.1| 1945|Drosophila melanogaster plexin A
protein.
Length = 1945
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 531 CIYRCKTLRRKNQRNYKNCF 472
CIY K++RRK +N K+CF
Sbjct: 371 CIYSLKSIRRKFMQNIKSCF 390
>AE014296-1095|AAF50676.1| 662|Drosophila melanogaster CG7386-PA
protein.
Length = 662
Score = 30.3 bits (65), Expect = 2.7
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = -3
Query: 680 EIFDDEITIRSTTEKIPAILQTKFRTNTR-YFSSEKESGLTKSKSKESASHVSTDVRPLG 504
E+ D+E + EK+ L+ R + +FSS + +GL + K KES S D + +G
Sbjct: 122 EMIDNEEDVFKLLEKVDKELEEHSRDQSEEHFSSAEHNGLEEEK-KESEGFNSDDEQAMG 180
Query: 503 EK 498
++
Sbjct: 181 QR 182
>AE014135-166|ABC65831.1| 419|Drosophila melanogaster CG11081-PE,
isoform E protein.
Length = 419
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 531 CIYRCKTLRRKNQRNYKNCF 472
CIY K++RRK +N K+CF
Sbjct: 371 CIYSLKSIRRKFMQNIKSCF 390
>AE014135-163|AAN06565.2| 1945|Drosophila melanogaster CG11081-PD,
isoform D protein.
Length = 1945
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 531 CIYRCKTLRRKNQRNYKNCF 472
CIY K++RRK +N K+CF
Sbjct: 371 CIYSLKSIRRKFMQNIKSCF 390
>AE014135-162|AAF59394.1| 1945|Drosophila melanogaster CG11081-PA,
isoform A protein.
Length = 1945
Score = 30.3 bits (65), Expect = 2.7
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = -2
Query: 531 CIYRCKTLRRKNQRNYKNCF 472
CIY K++RRK +N K+CF
Sbjct: 371 CIYSLKSIRRKFMQNIKSCF 390
>AY070987-1|AAL48609.1| 252|Drosophila melanogaster RE08075p
protein.
Length = 252
Score = 29.9 bits (64), Expect = 3.6
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = -3
Query: 314 PIKGYGEEXXXXXXTHVSHAV----YEKDGVKHMRMRFY 210
PI G+G+ T + H + +EKDGVK+MR++ Y
Sbjct: 142 PITGHGKANVTLINTKIEHRLIGEPFEKDGVKYMRLKDY 180
>AE014297-3562|AAF56308.2| 252|Drosophila melanogaster CG13618-PA
protein.
Length = 252
Score = 29.9 bits (64), Expect = 3.6
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 4/39 (10%)
Frame = -3
Query: 314 PIKGYGEEXXXXXXTHVSHAV----YEKDGVKHMRMRFY 210
PI G+G+ T + H + +EKDGVK+MR++ Y
Sbjct: 142 PITGHGKANVTLINTKIEHRLIGEPFEKDGVKYMRLKDY 180
>AE014297-4072|AAF56669.1| 463|Drosophila melanogaster CG6066-PA
protein.
Length = 463
Score = 29.5 bits (63), Expect = 4.7
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -3
Query: 650 STTEKIPAILQTKFRTNTRYFSSEKESG--LTKSKSKESASHVSTDVRP 510
ST++K + K + + S+K S +KSK+KESASH DV P
Sbjct: 296 STSKKDKKSKKKKKKRKSEAEKSKKSSSSSASKSKNKESASHNDEDVGP 344
>M20705-1|AAA70215.1| 112|Drosophila melanogaster unknown protein
protein.
Length = 112
Score = 28.7 bits (61), Expect = 8.2
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +3
Query: 168 HIKFNNTFISYPFNIESHSHMFHS 239
H N YP +I HSH FH+
Sbjct: 81 HTNINKNINIYPISISKHSHRFHT 104
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,388,714
Number of Sequences: 53049
Number of extensions: 472045
Number of successful extensions: 1520
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1520
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3149551053
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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