Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12e12
         (847 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    24   6.7  
AY062194-1|AAL58555.1|  151|Anopheles gambiae cytochrome P450 CY...    23   8.8  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.8 bits (49), Expect = 6.7
 Identities = 15/37 (40%), Positives = 18/37 (48%)
 Frame = +3

Query: 285  RALKSA*IVKSMEILPTLPCELL*DPGSFHRIPNTQK 395
            RAL SA    S    P +P   + DP S + IPN  K
Sbjct: 1250 RALMSAGGFASPPASPLVPDTAVPDPHSLYAIPNKVK 1286


>AY062194-1|AAL58555.1|  151|Anopheles gambiae cytochrome P450
           CYP4D16 protein.
          Length = 151

 Score = 23.4 bits (48), Expect = 8.8
 Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
 Frame = +2

Query: 257 TQNLTPKVTQ-SIKISLNCKINGNTSDTPM*TVIGPWQFSPNPQYPKNP 400
           T  L P V     K+  + +ING        T+I P+    NP++  NP
Sbjct: 68  TLRLYPSVPMFGRKMMEDAEINGKVFPAGSNTIILPFFLGRNPEFFPNP 116


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 939,541
Number of Sequences: 2352
Number of extensions: 20381
Number of successful extensions: 35
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89718867
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)