Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12e11
         (760 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC021208-1|AAH21208.1|  739|Homo sapiens leucine zipper-EF-hand ...    33   1.5  
BC014500-1|AAH14500.1|  739|Homo sapiens leucine zipper-EF-hand ...    33   1.5  
AF061025-1|AAD13138.1|  739|Homo sapiens leucine zipper-EF-hand ...    33   1.5  
AK000781-1|BAA91375.1|  393|Homo sapiens protein ( Homo sapiens ...    31   3.4  
AF307080-1|AAG27462.1| 1240|Homo sapiens lectomedin-3 protein.         31   3.4  
AC096723-1|AAY40992.1|  162|Homo sapiens unknown protein.              31   3.4  

>BC021208-1|AAH21208.1|  739|Homo sapiens leucine zipper-EF-hand
           containing transmembrane protein 1 protein.
          Length = 739

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
 Frame = -1

Query: 628 STKGIKCYNCLSFDHPGCWDPDHPDYANITIPNIDCYIPGMEFLCIVI----TSESAKLV 461
           ST G++  NCL+    GC  P HP Y +    ++ C+    E L IV     TS S   V
Sbjct: 40  STLGLR--NCLNVPF-GCCTPIHPVYTSSRGDHLGCWALRPECLRIVSRAPWTSTSVGFV 96

Query: 460 ETGQEIGPVRA-RTCVPAKDFSKKTVSYSMCSKLSKEL 350
             G +  PVR   +  P +D S    S       +K+L
Sbjct: 97  AVGPQCLPVRGWHSSRPVRDDSVVEKSLKSLKDKNKKL 134


>BC014500-1|AAH14500.1|  739|Homo sapiens leucine zipper-EF-hand
           containing transmembrane protein 1 protein.
          Length = 739

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
 Frame = -1

Query: 628 STKGIKCYNCLSFDHPGCWDPDHPDYANITIPNIDCYIPGMEFLCIVI----TSESAKLV 461
           ST G++  NCL+    GC  P HP Y +    ++ C+    E L IV     TS S   V
Sbjct: 40  STLGLR--NCLNVPF-GCCTPIHPVYTSSRGDHLGCWALRPECLRIVSRAPWTSTSVGFV 96

Query: 460 ETGQEIGPVRA-RTCVPAKDFSKKTVSYSMCSKLSKEL 350
             G +  PVR   +  P +D S    S       +K+L
Sbjct: 97  AVGPQCLPVRGWHSSRPVRDDSVVEKSLKSLKDKNKKL 134


>AF061025-1|AAD13138.1|  739|Homo sapiens leucine zipper-EF-hand
           containing transmembrane protein 1 protein.
          Length = 739

 Score = 32.7 bits (71), Expect = 1.5
 Identities = 31/98 (31%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
 Frame = -1

Query: 628 STKGIKCYNCLSFDHPGCWDPDHPDYANITIPNIDCYIPGMEFLCIVI----TSESAKLV 461
           ST G++  NCL+    GC  P HP Y +    ++ C+    E L IV     TS S   V
Sbjct: 40  STLGLR--NCLNVPF-GCCTPIHPVYTSSRGDHLGCWALRPECLRIVSRAPWTSTSVGFV 96

Query: 460 ETGQEIGPVRA-RTCVPAKDFSKKTVSYSMCSKLSKEL 350
             G +  PVR   +  P +D S    S       +K+L
Sbjct: 97  AVGPQCLPVRGWHSSRPVRDDSVVEKSLKSLKDKNKKL 134


>AK000781-1|BAA91375.1|  393|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20774 fis, clone COL06031. ).
          Length = 393

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 625 TKGIKCYNCLSFDHPGCWDPDHPDYANITIP 533
           T G+  Y CL+ D  G WDP  PD +N + P
Sbjct: 211 TIGVSTYLCLAPD--GIWDPQGPDLSNCSSP 239


>AF307080-1|AAG27462.1| 1240|Homo sapiens lectomedin-3 protein.
          Length = 1240

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 625 TKGIKCYNCLSFDHPGCWDPDHPDYANITIP 533
           T G+  Y CL+ D  G WDP  PD +N + P
Sbjct: 525 TIGVSTYLCLAPD--GIWDPQGPDLSNCSSP 553


>AC096723-1|AAY40992.1|  162|Homo sapiens unknown protein.
          Length = 162

 Score = 31.5 bits (68), Expect = 3.4
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -1

Query: 625 TKGIKCYNCLSFDHPGCWDPDHPDYANITIP 533
           T G+  Y CL+ D  G WDP  PD +N + P
Sbjct: 126 TIGVSTYLCLAPD--GIWDPQGPDLSNCSSP 154


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,002,827
Number of Sequences: 237096
Number of extensions: 1263773
Number of successful extensions: 3277
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3277
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9183116696
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)