Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12e11
(760 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118764-1|AAM50624.1| 425|Drosophila melanogaster GH09876p pro... 32 0.98
AE014134-3010|AAF53735.2| 425|Drosophila melanogaster CG10650-P... 32 0.98
BT022976-1|AAY55392.1| 187|Drosophila melanogaster IP04187p pro... 28 1.4
AE014134-1465|AAF52644.2| 187|Drosophila melanogaster CG14274-P... 28 1.4
BT014672-1|AAT27296.1| 294|Drosophila melanogaster AT13084p pro... 30 3.9
AE014296-1323|AAN12020.1| 294|Drosophila melanogaster CG32371-P... 30 3.9
AY071603-1|AAL49225.1| 80|Drosophila melanogaster RE65321p pro... 29 6.9
AE014134-2176|AAF53178.1| 151|Drosophila melanogaster CG17218-P... 29 6.9
>AY118764-1|AAM50624.1| 425|Drosophila melanogaster GH09876p
protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.98
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -1
Query: 613 KCYNCLSFDHPGCWDPDHPD-YANITIPNIDCY 518
+C C+S + GCW +PD I PN CY
Sbjct: 321 QCITCISNEVSGCWSAKYPDTLPLINCPNGTCY 353
>AE014134-3010|AAF53735.2| 425|Drosophila melanogaster CG10650-PA
protein.
Length = 425
Score = 31.9 bits (69), Expect = 0.98
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -1
Query: 613 KCYNCLSFDHPGCWDPDHPD-YANITIPNIDCY 518
+C C+S + GCW +PD I PN CY
Sbjct: 321 QCITCISNEVSGCWSAKYPDTLPLINCPNGTCY 353
>BT022976-1|AAY55392.1| 187|Drosophila melanogaster IP04187p
protein.
Length = 187
Score = 27.9 bits (59), Expect(2) = 1.4
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Frame = -1
Query: 616 IKCYNCLSFDHPGCWDPDHPDYANITIPNIDCYIPGMEFL-CIVITSESAKLVETGQEIG 440
I+CY C S D+P C D +N +I +C + M+ L + + G
Sbjct: 20 IRCYVCDSSDNPSCADLG----SNSSIVAEECTLDKMKSLDTWLFDLNKFSYFDNGANKS 75
Query: 439 PVRARTCVPAKD-FSKKTVSYSMCSKLSKELSASEIF-SRIAVTRP 308
P+ V AKD ++K V+ C + + A EI +++ + P
Sbjct: 76 PLMNCQKVVAKDPDTRKVVTARFCQLDTGDSDACEILRTKLRIPSP 121
Score = 22.2 bits (45), Expect(2) = 1.4
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 304 CTLCKKHLCTDAA 266
C +CK H C AA
Sbjct: 156 CGICKSHRCNGAA 168
>AE014134-1465|AAF52644.2| 187|Drosophila melanogaster CG14274-PA
protein.
Length = 187
Score = 27.9 bits (59), Expect(2) = 1.4
Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 3/106 (2%)
Frame = -1
Query: 616 IKCYNCLSFDHPGCWDPDHPDYANITIPNIDCYIPGMEFL-CIVITSESAKLVETGQEIG 440
I+CY C S D+P C D +N +I +C + M+ L + + G
Sbjct: 20 IRCYVCDSSDNPSCADLG----SNSSIVAEECTLDKMKSLDTWLFDLNKFSYFDNGANKS 75
Query: 439 PVRARTCVPAKD-FSKKTVSYSMCSKLSKELSASEIF-SRIAVTRP 308
P+ V AKD ++K V+ C + + A EI +++ + P
Sbjct: 76 PLMNCQKVVAKDPDTRKVVTARFCQLDTGDSDACEILRTKLRIPSP 121
Score = 22.2 bits (45), Expect(2) = 1.4
Identities = 7/13 (53%), Positives = 8/13 (61%)
Frame = -1
Query: 304 CTLCKKHLCTDAA 266
C +CK H C AA
Sbjct: 156 CGICKSHRCNGAA 168
>BT014672-1|AAT27296.1| 294|Drosophila melanogaster AT13084p
protein.
Length = 294
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -1
Query: 388 VSYSMCSKLSKELSASEIFSRIAVTRPHCTLCKKHLCTDAAHC*TGDVTGLLSRPV--IP 215
V+ +KLS S +E+ S + T + LCT AA+C D+ S P+ +
Sbjct: 10 VNVRYTNKLSSNSSRAEMLSWVNNTLKSQFFKVEELCTGAAYCQLMDILFARSIPMQRVK 69
Query: 214 IRVTFRYKHLRIYK 173
R Y++++ +K
Sbjct: 70 FRTNVEYEYIQNFK 83
>AE014296-1323|AAN12020.1| 294|Drosophila melanogaster CG32371-PA
protein.
Length = 294
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -1
Query: 388 VSYSMCSKLSKELSASEIFSRIAVTRPHCTLCKKHLCTDAAHC*TGDVTGLLSRPV--IP 215
V+ +KLS S +E+ S + T + LCT AA+C D+ S P+ +
Sbjct: 10 VNVRYTNKLSSNSSRAEMLSWVNNTLKSQFFKVEELCTGAAYCQLMDILFARSIPMQRVK 69
Query: 214 IRVTFRYKHLRIYK 173
R Y++++ +K
Sbjct: 70 FRTNVEYEYIQNFK 83
>AY071603-1|AAL49225.1| 80|Drosophila melanogaster RE65321p
protein.
Length = 80
Score = 29.1 bits (62), Expect = 6.9
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 622 KGIKCYNCLSFDHPGCWDPDHPDYANITIPNIDC-YIPGMEFL 497
+ IKC++C S + P C DP + N T+ DC P +E L
Sbjct: 22 QAIKCWDCRSDNDPKCGDP----FDNSTLAITDCQQAPELEHL 60
>AE014134-2176|AAF53178.1| 151|Drosophila melanogaster CG17218-PA,
isoform A protein.
Length = 151
Score = 29.1 bits (62), Expect = 6.9
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -1
Query: 622 KGIKCYNCLSFDHPGCWDPDHPDYANITIPNIDC-YIPGMEFL 497
+ IKC++C S + P C DP + N T+ DC P +E L
Sbjct: 22 QAIKCWDCRSDNDPKCGDP----FDNSTLAITDCQQAPELEHL 60
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,045,335
Number of Sequences: 53049
Number of extensions: 423908
Number of successful extensions: 1176
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1123
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1176
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3478915869
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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