Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12e09
         (777 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    25   0.89 
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.7  
EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic hor...    23   3.6  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   4.8  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.3  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.6 bits (51), Expect = 0.89
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = -2

Query: 473 CHFVFLFVIYTNYVFYN 423
           C+F++LF +Y  Y++Y+
Sbjct: 148 CYFIYLFTVY--YIYYS 162


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -3

Query: 598 LNNFTYIILLIYCT-TP**YYSL*FFVS*N*FLEYKRIVYKILAILFFSLSSIPIMFFII 422
           L+ FTY+ +++YC  T   Y S   + + N  +    +VY + A +         + F++
Sbjct: 324 LSIFTYVPMILYCVYTTATYDSFMIYKTTNIIILGLNVVYVVTAWICAITKRDMFVEFLL 383

Query: 421 NVRDF 407
            + DF
Sbjct: 384 KLVDF 388


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -3

Query: 598 LNNFTYIILLIYCT-TP**YYSL*FFVS*N*FLEYKRIVYKILAILFFSLSSIPIMFFII 422
           L+ FTY+ +++YC  T   Y S   + + N  +    +VY + A +         + F++
Sbjct: 49  LSIFTYVPMILYCVYTTATYDSFMIYKTTNIIILGLNVVYVVTAWICAITKRDMFVEFLL 108

Query: 421 NVRDF 407
            + DF
Sbjct: 109 KLVDF 113


>EF222288-1|ABN79648.1|   73|Tribolium castaneum adipokinetic
           hormone 1 protein.
          Length = 73

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 7/21 (33%), Positives = 14/21 (66%)
 Frame = -3

Query: 490 IVYKILAILFFSLSSIPIMFF 428
           ++YKI+ + FF++ + P   F
Sbjct: 51  LIYKIIQVSFFNIPNSPQQIF 71


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +1

Query: 139 FCYLKPFIIIFVIILQLYWLYQLV 210
           FCYL   I+I  I L     YQL+
Sbjct: 175 FCYLWVLILICNIALAFKQRYQLI 198


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 464 VFLFVIYTNYVFYNKCTRF 408
           +FLF IYTN       T F
Sbjct: 81  IFLFAIYTNLSILTTVTIF 99


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,172
Number of Sequences: 336
Number of extensions: 3505
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)