Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= rbmte12e04
         (581 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450 CY...    25   1.8  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   1.8  
L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase...    24   4.1  
L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase...    24   4.1  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   4.1  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          23   5.5  
AY146727-1|AAO12087.1|  139|Anopheles gambiae odorant-binding pr...    23   5.5  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   7.2  
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         23   9.5  
AY146719-1|AAO12079.1|  159|Anopheles gambiae odorant-binding pr...    23   9.5  

>AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450
           CYP6P2 protein.
          Length = 507

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = +1

Query: 208 LPKYRGFEQLPVLPDHLTTEQDAVHVLPQRCVIY--QLAVHHGLQ 336
           L KY   E +   P+H  T     HV+P+  +I     A+HH  Q
Sbjct: 372 LRKYPPLETVTRAPEHDYTVPGTAHVIPKGTMIQIPIYALHHDAQ 416


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +1

Query: 514 EQRQVKQHSNQRPPQHRPHE 573
           +Q+Q +Q   QRP Q RP +
Sbjct: 461 QQQQPQQQQQQRPQQQRPQQ 480



 Score = 22.6 bits (46), Expect = 9.5
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 514 EQRQVKQHSNQRPPQHRPHE 573
           +Q+Q ++   QRP Q RP +
Sbjct: 466 QQQQQQRPQQQRPQQQRPQQ 485


>L76433-1|AAC27659.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 346 LHSRLREAGVGVRTKHRPLFLTQYHTILAS 435
           L  RL E  +GV+++HR  +  +Y  + AS
Sbjct: 140 LQFRLLENKLGVKSEHRVKYNQKYTEVFAS 169


>L76432-1|AAC27663.1|  392|Anopheles gambiae tryptophan oxygenase
           protein.
          Length = 392

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 346 LHSRLREAGVGVRTKHRPLFLTQYHTILAS 435
           L  RL E  +GV+++HR  +  +Y  + AS
Sbjct: 140 LQFRLLENKLGVKSEHRVKYNQKYTEVFAS 169


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 87   AVLFDYMPAGGASSGXXRRIIPSXLS 10
            A +  +MPA G+SSG     IP  ++
Sbjct: 984  ASMMTFMPAAGSSSGTATTRIPDSIT 1009


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 523 QVKQHSNQRPPQHRPHEH 576
           Q   H +Q+P Q + H+H
Sbjct: 638 QTDHHQSQQPQQQQQHQH 655


>AY146727-1|AAO12087.1|  139|Anopheles gambiae odorant-binding
           protein AgamOBP20 protein.
          Length = 139

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -3

Query: 369 CLAQSRVEPRLLESMMNGELIDDAALRKHVYCVL 268
           CL +++V   L+  +   +  D   L+ +V CV+
Sbjct: 36  CLGKTKVAEELVNGLRESKFADVKELKCYVNCVM 69


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.0 bits (47), Expect = 7.2
 Identities = 8/27 (29%), Positives = 15/27 (55%)
 Frame = +2

Query: 170 TLVTSRPAGLAASFPSIAALSSFPSFP 250
           +L++ +PA +  SFP +   +  P  P
Sbjct: 9   SLISDKPAPVKKSFPYVGPFTQLPVTP 35


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +1

Query: 115 IPGHVLGTSAGLLGARLQHLGDVTPGR 195
           +PG V    A +   R  H GD+ P +
Sbjct: 19  VPGGVDSDGAQIFVGRAHHAGDLLPAK 45


>AY146719-1|AAO12079.1|  159|Anopheles gambiae odorant-binding
           protein AgamOBP2 protein.
          Length = 159

 Score = 22.6 bits (46), Expect = 9.5
 Identities = 12/46 (26%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = -3

Query: 405 EERAMFRSHSDACLAQSRVEPRLLESMMNGELIDD-AALRKHVYCV 271
           E  A  R     CL ++ V P  ++   + +  DD  AL+ ++ C+
Sbjct: 45  ETLAFLRPLGKLCLEETGVSPEAIKRFSDADPFDDNRALKCYMDCM 90


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,520
Number of Sequences: 2352
Number of extensions: 8880
Number of successful extensions: 58
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55506924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)