Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= rbmte12e04
(581 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061165-1|AAL28713.1| 493|Drosophila melanogaster LD13176p pro... 32 0.49
AE014296-2650|AAF49528.3| 493|Drosophila melanogaster CG5151-PA... 32 0.49
AE014296-2649|AAS64987.1| 695|Drosophila melanogaster CG5151-PB... 32 0.49
AE014298-1352|AAF46511.2| 1003|Drosophila melanogaster CG3003-PB... 31 1.5
L04960-2|AAF01347.1| 2711|Drosophila melanogaster fat facets sho... 29 4.6
L04960-1|AAF01348.1| 2747|Drosophila melanogaster fat facets lon... 29 4.6
L04959-1|AAF01345.1| 2747|Drosophila melanogaster fat facets lon... 29 4.6
L04958-1|AAF01346.1| 2711|Drosophila melanogaster fat facets sho... 29 4.6
AF145677-1|AAD38652.1| 1689|Drosophila melanogaster BcDNA.LD2258... 29 4.6
AE014297-4810|AAN14291.1| 2711|Drosophila melanogaster CG1945-PC... 29 4.6
AE014297-4809|AAF57198.1| 2778|Drosophila melanogaster CG1945-PA... 29 4.6
M19020-1|AAA28900.1| 655|Drosophila melanogaster protein ( D.me... 28 8.0
AY129457-1|AAM76199.1| 688|Drosophila melanogaster RE54280p pro... 28 8.0
AF071934-1|AAC64519.1| 643|Drosophila melanogaster single-minde... 28 8.0
AE014297-1631|AAN14343.3| 664|Drosophila melanogaster CG7771-PB... 28 8.0
AE014297-1630|AAF54902.3| 688|Drosophila melanogaster CG7771-PA... 28 8.0
AE014296-1713|AAF50220.2| 1473|Drosophila melanogaster CG16711-P... 28 8.0
>AY061165-1|AAL28713.1| 493|Drosophila melanogaster LD13176p
protein.
Length = 493
Score = 32.3 bits (70), Expect = 0.49
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +2
Query: 32 LRXLPLEAPPAGM*SNSTAFLL*PHLNIFQATSSGLAP-GCSAHASSTLVTSRPAGLAAS 208
+R +P + G +S+++ L QA SS P G S ASS+ S+P +
Sbjct: 243 VRDVPEQISAGGCGVSSSSY----RLTTLQAASSTYTPAGVSVSASSSSSKSKPNAITKF 298
Query: 209 FPSIAALSSFPSFPI--ILQLSRTQYTCFLSAASSISSPFIMDSNSLGST 352
F I++ S PS + + S S+ASS++S + ++S S+
Sbjct: 299 FSRISSPKSPPSCTMTSVATASPASSVSMSSSASSLASSACVSTSSSASS 348
>AE014296-2650|AAF49528.3| 493|Drosophila melanogaster CG5151-PA,
isoform A protein.
Length = 493
Score = 32.3 bits (70), Expect = 0.49
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +2
Query: 32 LRXLPLEAPPAGM*SNSTAFLL*PHLNIFQATSSGLAP-GCSAHASSTLVTSRPAGLAAS 208
+R +P + G +S+++ L QA SS P G S ASS+ S+P +
Sbjct: 243 VRDVPEQISAGGCGVSSSSY----RLTTLQAASSTYTPAGVSVSASSSSSKSKPNAITKF 298
Query: 209 FPSIAALSSFPSFPI--ILQLSRTQYTCFLSAASSISSPFIMDSNSLGST 352
F I++ S PS + + S S+ASS++S + ++S S+
Sbjct: 299 FSRISSPKSPPSCTMTSVATASPASSVSMSSSASSLASSACVSTSSSASS 348
>AE014296-2649|AAS64987.1| 695|Drosophila melanogaster CG5151-PB,
isoform B protein.
Length = 695
Score = 32.3 bits (70), Expect = 0.49
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +2
Query: 32 LRXLPLEAPPAGM*SNSTAFLL*PHLNIFQATSSGLAP-GCSAHASSTLVTSRPAGLAAS 208
+R +P + G +S+++ L QA SS P G S ASS+ S+P +
Sbjct: 445 VRDVPEQISAGGCGVSSSSY----RLTTLQAASSTYTPAGVSVSASSSSSKSKPNAITKF 500
Query: 209 FPSIAALSSFPSFPI--ILQLSRTQYTCFLSAASSISSPFIMDSNSLGST 352
F I++ S PS + + S S+ASS++S + ++S S+
Sbjct: 501 FSRISSPKSPPSCTMTSVATASPASSVSMSSSASSLASSACVSTSSSASS 550
>AE014298-1352|AAF46511.2| 1003|Drosophila melanogaster CG3003-PB
protein.
Length = 1003
Score = 30.7 bits (66), Expect = 1.5
Identities = 15/28 (53%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +1
Query: 499 HVAWHEQRQVKQHSNQ-RPPQHRPHEHS 579
HV +Q+Q QH Q PPQHRP E S
Sbjct: 278 HVQRRQQQQHHQHLRQPSPPQHRPLERS 305
>L04960-2|AAF01347.1| 2711|Drosophila melanogaster fat facets short
isoform protein.
Length = 2711
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 250 DHLTTEQDAVHVLPQRCVIYQLAVHHGLQQPRL 348
+H T EQ +H P + V+Y L+V HGL P L
Sbjct: 1191 EHCTPEQMFLHPTPAQ-VLYNLSVLHGLLIPAL 1222
>L04960-1|AAF01348.1| 2747|Drosophila melanogaster fat facets long
isoform protein.
Length = 2747
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 250 DHLTTEQDAVHVLPQRCVIYQLAVHHGLQQPRL 348
+H T EQ +H P + V+Y L+V HGL P L
Sbjct: 1191 EHCTPEQMFLHPTPAQ-VLYNLSVLHGLLIPAL 1222
>L04959-1|AAF01345.1| 2747|Drosophila melanogaster fat facets long
isoform protein.
Length = 2747
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 250 DHLTTEQDAVHVLPQRCVIYQLAVHHGLQQPRL 348
+H T EQ +H P + V+Y L+V HGL P L
Sbjct: 1191 EHCTPEQMFLHPTPAQ-VLYNLSVLHGLLIPAL 1222
>L04958-1|AAF01346.1| 2711|Drosophila melanogaster fat facets short
isoform protein.
Length = 2711
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 250 DHLTTEQDAVHVLPQRCVIYQLAVHHGLQQPRL 348
+H T EQ +H P + V+Y L+V HGL P L
Sbjct: 1191 EHCTPEQMFLHPTPAQ-VLYNLSVLHGLLIPAL 1222
>AF145677-1|AAD38652.1| 1689|Drosophila melanogaster BcDNA.LD22582
protein.
Length = 1689
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 250 DHLTTEQDAVHVLPQRCVIYQLAVHHGLQQPRL 348
+H T EQ +H P + V+Y L+V HGL P L
Sbjct: 102 EHCTPEQMFLHPTPAQ-VLYNLSVLHGLLIPAL 133
>AE014297-4810|AAN14291.1| 2711|Drosophila melanogaster CG1945-PC,
isoform C protein.
Length = 2711
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 250 DHLTTEQDAVHVLPQRCVIYQLAVHHGLQQPRL 348
+H T EQ +H P + V+Y L+V HGL P L
Sbjct: 1191 EHCTPEQMFLHPTPAQ-VLYNLSVLHGLLIPAL 1222
>AE014297-4809|AAF57198.1| 2778|Drosophila melanogaster CG1945-PA,
isoform A protein.
Length = 2778
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = +1
Query: 250 DHLTTEQDAVHVLPQRCVIYQLAVHHGLQQPRL 348
+H T EQ +H P + V+Y L+V HGL P L
Sbjct: 1191 EHCTPEQMFLHPTPAQ-VLYNLSVLHGLLIPAL 1222
>M19020-1|AAA28900.1| 655|Drosophila melanogaster protein (
D.melanogaster single-minded (sim) mRNA, encoding a
nuclear protein, 3'end.).
Length = 655
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 278 YTCFLSAASSISSPFIMDSNSLGSTRDCARQASE*ERNIALSSLPNITQF 427
Y + A+S+ PF +SNS S+ + RQ S +I + P+ T +
Sbjct: 564 YDATVDVATSMIRPFSANSNSCSSSSESERQLSTGNASIVNETSPSQTTY 613
>AY129457-1|AAM76199.1| 688|Drosophila melanogaster RE54280p
protein.
Length = 688
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 278 YTCFLSAASSISSPFIMDSNSLGSTRDCARQASE*ERNIALSSLPNITQF 427
Y + A+S+ PF +SNS S+ + RQ S +I + P+ T +
Sbjct: 597 YDATVDVATSMIRPFSANSNSCSSSSESERQLSTGNASIVNETSPSQTTY 646
>AF071934-1|AAC64519.1| 643|Drosophila melanogaster single-minded
protein protein.
Length = 643
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 278 YTCFLSAASSISSPFIMDSNSLGSTRDCARQASE*ERNIALSSLPNITQF 427
Y + A+S+ PF +SNS S+ + RQ S +I + P+ T +
Sbjct: 552 YDATVDVATSMIRPFSANSNSCSSSSESERQLSTGNASIVNETSPSQTTY 601
>AE014297-1631|AAN14343.3| 664|Drosophila melanogaster CG7771-PB,
isoform B protein.
Length = 664
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 278 YTCFLSAASSISSPFIMDSNSLGSTRDCARQASE*ERNIALSSLPNITQF 427
Y + A+S+ PF +SNS S+ + RQ S +I + P+ T +
Sbjct: 573 YDATVDVATSMIRPFSANSNSCSSSSESERQLSTGNASIVNETSPSQTTY 622
>AE014297-1630|AAF54902.3| 688|Drosophila melanogaster CG7771-PA,
isoform A protein.
Length = 688
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 278 YTCFLSAASSISSPFIMDSNSLGSTRDCARQASE*ERNIALSSLPNITQF 427
Y + A+S+ PF +SNS S+ + RQ S +I + P+ T +
Sbjct: 597 YDATVDVATSMIRPFSANSNSCSSSSESERQLSTGNASIVNETSPSQTTY 646
>AE014296-1713|AAF50220.2| 1473|Drosophila melanogaster CG16711-PA,
isoform A protein.
Length = 1473
Score = 28.3 bits (60), Expect = 8.0
Identities = 9/22 (40%), Positives = 15/22 (68%)
Frame = +1
Query: 511 HEQRQVKQHSNQRPPQHRPHEH 576
H+Q+Q +QH Q+ QH+ +H
Sbjct: 1349 HQQQQQQQHQQQQQQQHQQQQH 1370
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,217,625
Number of Sequences: 53049
Number of extensions: 447935
Number of successful extensions: 2948
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2904
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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